RNA–Protein interactions for RNA: ENST00000556771.5

MTHFD1-214, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-214ENST00000556771 SPRR2FQ96RM1 72 aa4.18□□□□□ -1.74
MTHFD1-214ENST00000556771 KRTAP2-2Q9BYT5 123 aa4.15□□□□□ -1.75
MTHFD1-214ENST00000556771 KRTAP2-1Q9BYU5 128 aa4.15□□□□□ -1.75
MTHFD1-214ENST00000556771 KRTAP5-3Q6L8H2 238 aa4.14□□□□□ -1.75
MTHFD1-214ENST00000556771 A8MU10 97 aa4.12□□□□□ -1.75
MTHFD1-214ENST00000556771 MT3P25713 68 aa4.12□□□□□ -1.75
MTHFD1-214ENST00000556771 MDN1Q9NU22 5596 aa4.11□□□□□ -1.75
MTHFD1-214ENST00000556771 UQCR11O14957 56 aa4.1□□□□□ -1.75
MTHFD1-214ENST00000556771 SPRR2EP22531 72 aa4.1□□□□□ -1.75
MTHFD1-214ENST00000556771 SPRR2BP35325 72 aa4.1□□□□□ -1.75
MTHFD1-214ENST00000556771 SPRR2AP35326 72 aa4.1□□□□□ -1.75
MTHFD1-214ENST00000556771 PSPHP1O15172 72 aa4.05□□□□□ -1.76
MTHFD1-214ENST00000556771 NDUFAF8A1L188 74 aa4.04□□□□□ -1.76
MTHFD1-214ENST00000556771 MIR22HGQ0VDD5 57 aa4.01□□□□□ -1.77
MTHFD1-214ENST00000556771 PRO0628Q9UI54 55 aa4.01□□□□□ -1.77
MTHFD1-214ENST00000556771 TNP1P09430 55 aa3.99□□□□□ -1.77
MTHFD1-214ENST00000556771 C10orf95Q9H7T3 257 aa3.97□□□□□ -1.77
MTHFD1-214ENST00000556771 CDC42SE1Q9NRR8 79 aa3.97□□□□□ -1.77
MTHFD1-214ENST00000556771 SPRR2DP22532 72 aa3.96□□□□□ -1.78
MTHFD1-214ENST00000556771 K7ERS5 55 aa3.95□□□□□ -1.78
MTHFD1-214ENST00000556771 KRTAP19-7Q3SYF9 63 aa3.95□□□□□ -1.78
MTHFD1-214ENST00000556771 A6NED7 52 aa3.92□□□□□ -1.78
MTHFD1-214ENST00000556771 MT1EP04732 61 aa3.92□□□□□ -1.78
MTHFD1-214ENST00000556771 BRK1Q8WUW1 75 aa3.91□□□□□ -1.78
MTHFD1-214ENST00000556771 LCE1FQ5T754 118 aa3.89□□□□□ -1.79
MTHFD1-214ENST00000556771 KRTAP19-5Q3LI72 72 aa3.88□□□□□ -1.79
MTHFD1-214ENST00000556771 LCE3AQ5TA76 89 aa3.87□□□□□ -1.79
MTHFD1-214ENST00000556771 KRTAP19-3Q7Z4W3 81 aa3.87□□□□□ -1.79
MTHFD1-214ENST00000556771 KRTAP25-1Q3LHN0 102 aa3.84□□□□□ -1.79
MTHFD1-214ENST00000556771 PMAIP1Q13794 54 aa3.82□□□□□ -1.8
MTHFD1-214ENST00000556771 MT1GP13640 62 aa3.81□□□□□ -1.8
MTHFD1-214ENST00000556771 PP632Q6XCG6 107 aa3.81□□□□□ -1.8
MTHFD1-214ENST00000556771 AHNAK2Q8IVF2 5795 aa3.78□□□□□ -1.8
MTHFD1-214ENST00000556771 SPRR5A0A1B0GTR4 108 aa3.77□□□□□ -1.81
MTHFD1-214ENST00000556771 MT1LQ93083 61 aa3.77□□□□□ -1.81
MTHFD1-214ENST00000556771 KRTAP5-10Q6L8G5 202 aa3.76□□□□□ -1.81
MTHFD1-214ENST00000556771 KRTAP12-3P60328 96 aa3.75□□□□□ -1.81
MTHFD1-214ENST00000556771 DSTQ03001 7570 aaKnown RBP3.75□□□□□ -1.81
MTHFD1-214ENST00000556771 KRTAP5-7Q6L8G8 165 aa3.73□□□□□ -1.81
MTHFD1-214ENST00000556771 MT1MQ8N339 61 aa3.72□□□□□ -1.81
MTHFD1-214ENST00000556771 ROMO1P60602 79 aa3.67□□□□□ -1.82
MTHFD1-214ENST00000556771 KTN1-AS1Q86SY8 53 aa3.64□□□□□ -1.83
MTHFD1-214ENST00000556771 HMCN1Q96RW7 5635 aa3.63□□□□□ -1.83
MTHFD1-214ENST00000556771 LCE3CQ5T5A8 94 aa3.62□□□□□ -1.83
MTHFD1-214ENST00000556771 KRTAP4-3Q9BYR4 195 aa3.57□□□□□ -1.84
MTHFD1-214ENST00000556771 LCE1EQ5T753 118 aa3.53□□□□□ -1.84
MTHFD1-214ENST00000556771 KRTAP5-4Q6L8H1 288 aa3.48□□□□□ -1.85
MTHFD1-214ENST00000556771 MT4P47944 62 aa3.43□□□□□ -1.86
MTHFD1-214ENST00000556771 AHNAKQ09666 5890 aaKnown RBP3.41□□□□□ -1.86
MTHFD1-214ENST00000556771 KRTAP5-11Q6L8G4 156 aa3.41□□□□□ -1.86
MTHFD1-214ENST00000556771 KRTAP5-5Q701N2 237 aaPredicted RBP3.4□□□□□ -1.87
MTHFD1-214ENST00000556771 KRTAP12-4P60329 112 aa3.31□□□□□ -1.88
MTHFD1-214ENST00000556771 LCE3EQ5T5B0 92 aa3.3□□□□□ -1.88
MTHFD1-214ENST00000556771 KRTAP20-2Q3LI61 65 aa3.27□□□□□ -1.89
MTHFD1-214ENST00000556771 MUC5BQ9HC84 5762 aaPredicted RBP3.26□□□□□ -1.89
MTHFD1-214ENST00000556771 KRTAP9-6A8MVA2 160 aa3.26□□□□□ -1.89
MTHFD1-214ENST00000556771 LUZP6Q538Z0 58 aa3.26□□□□□ -1.89
MTHFD1-214ENST00000556771 MUC5ACP98088 5654 aa3.26□□□□□ -1.89
MTHFD1-214ENST00000556771 MT1AP04731 61 aa3.23□□□□□ -1.89
MTHFD1-214ENST00000556771 KRTAP6-1Q3LI64 71 aa3.16□□□□□ -1.9
MTHFD1-214ENST00000556771 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.14□□□□□ -1.91
MTHFD1-214ENST00000556771 SYNE1Q8NF91 8797 aaKnown RBP3.11□□□□□ -1.91
MTHFD1-214ENST00000556771 KRTAP5-2Q701N4 177 aa3.07□□□□□ -1.92
MTHFD1-214ENST00000556771 KRTAP6-2Q3LI66 62 aa3□□□□□ -1.93
MTHFD1-214ENST00000556771 KRTAP5-8O75690 187 aa2.93□□□□□ -1.94
MTHFD1-214ENST00000556771 LCE3DQ9BYE3 92 aa2.79□□□□□ -1.96
MTHFD1-214ENST00000556771 KRTAP5-1Q6L8H4 278 aa2.78□□□□□ -1.96
MTHFD1-214ENST00000556771 OBSCNQ5VST9 7968 aa2.72□□□□□ -1.97
MTHFD1-214ENST00000556771 KRTAP4-4Q9BYR3 166 aa2.62□□□□□ -1.99
MTHFD1-214ENST00000556771 INE1O15225 51 aa2.59□□□□□ -1.99
MTHFD1-214ENST00000556771 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
MTHFD1-214ENST00000556771 LCE1BQ5T7P3 118 aa2.49□□□□□ -2.01
MTHFD1-214ENST00000556771 PHGR1C9JFL3 82 aa2.23□□□□□ -2.05
MTHFD1-214ENST00000556771 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
MTHFD1-214ENST00000556771 PRM1P04553 51 aa1.86□□□□□ -2.11
MTHFD1-214ENST00000556771 MUC19Q7Z5P9 8384 aa1.83□□□□□ -2.12
MTHFD1-214ENST00000556771 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
MTHFD1-214ENST00000556771 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 55.8 ms