RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 PP632Q6XCG6 107 aa5.86□□□□□ -1.47
TRAPPC6B-206ENST00000556765 DSTQ03001 7570 aaKnown RBP5.86□□□□□ -1.47
TRAPPC6B-206ENST00000556765 KRTAP23-1A1A580 65 aa5.85□□□□□ -1.47
TRAPPC6B-206ENST00000556765 H3BS24 57 aa5.81□□□□□ -1.48
TRAPPC6B-206ENST00000556765 KRTAP8-1Q8IUC2 63 aa5.81□□□□□ -1.48
TRAPPC6B-206ENST00000556765 MT1XP80297 61 aa5.8□□□□□ -1.48
TRAPPC6B-206ENST00000556765 KRTAP4-9Q9BYQ8 210 aa5.69□□□□□ -1.5
TRAPPC6B-206ENST00000556765 HMCN1Q96RW7 5635 aa5.68□□□□□ -1.5
TRAPPC6B-206ENST00000556765 AHNAK2Q8IVF2 5795 aa5.64□□□□□ -1.51
TRAPPC6B-206ENST00000556765 KRTAP10-12P60413 245 aa5.6□□□□□ -1.51
TRAPPC6B-206ENST00000556765 KRTAP4-8A0A0G2JLE6 195 aa5.55□□□□□ -1.52
TRAPPC6B-206ENST00000556765 KRTAP4-8Q9BYQ9 185 aa5.55□□□□□ -1.52
TRAPPC6B-206ENST00000556765 KRTAP10-7P60409 375 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC6B-206ENST00000556765 LCE3AQ5TA76 89 aa5.52□□□□□ -1.53
TRAPPC6B-206ENST00000556765 LCE1DQ5T752 114 aa5.46□□□□□ -1.54
TRAPPC6B-206ENST00000556765 KRTAP5-10Q6L8G5 202 aa5.45□□□□□ -1.54
TRAPPC6B-206ENST00000556765 KRTAP12-3P60328 96 aa5.36□□□□□ -1.55
TRAPPC6B-206ENST00000556765 KRTAP5-7Q6L8G8 165 aa5.34□□□□□ -1.55
TRAPPC6B-206ENST00000556765 MT4P47944 62 aa5.3□□□□□ -1.56
TRAPPC6B-206ENST00000556765 KRTAP15-1Q3LI76 137 aa5.29□□□□□ -1.56
TRAPPC6B-206ENST00000556765 KRTAP19-4Q3LI73 84 aa5.26□□□□□ -1.57
TRAPPC6B-206ENST00000556765 KRTAP19-5Q3LI72 72 aa5.24□□□□□ -1.57
TRAPPC6B-206ENST00000556765 SPRR5A0A1B0GTR4 108 aa5.23□□□□□ -1.57
TRAPPC6B-206ENST00000556765 LCE4AQ5TA78 99 aa5.22□□□□□ -1.57
TRAPPC6B-206ENST00000556765 LCE5AQ5TCM9 118 aa5.19□□□□□ -1.58
TRAPPC6B-206ENST00000556765 KRTAP19-7Q3SYF9 63 aa5.17□□□□□ -1.58
TRAPPC6B-206ENST00000556765 KRTAP5-3Q6L8H2 238 aa5.14□□□□□ -1.59
TRAPPC6B-206ENST00000556765 MT1EP04732 61 aa5.11□□□□□ -1.59
TRAPPC6B-206ENST00000556765 KRTAP19-3Q7Z4W3 81 aa5.07□□□□□ -1.6
TRAPPC6B-206ENST00000556765 KRTAP4-6Q9BYQ5 205 aa5.06□□□□□ -1.6
TRAPPC6B-206ENST00000556765 LUZP6Q538Z0 58 aa5.05□□□□□ -1.6
TRAPPC6B-206ENST00000556765 LCE3CQ5T5A8 94 aa5.01□□□□□ -1.61
TRAPPC6B-206ENST00000556765 MT1LQ93083 61 aa5.01□□□□□ -1.61
TRAPPC6B-206ENST00000556765 LOC100996750A0A140TA64 210 aa4.99□□□□□ -1.61
TRAPPC6B-206ENST00000556765 KRTAP5-4Q6L8H1 288 aa4.99□□□□□ -1.61
TRAPPC6B-206ENST00000556765 AHNAKQ09666 5890 aaKnown RBP4.94□□□□□ -1.62
TRAPPC6B-206ENST00000556765 MT1GP13640 62 aa4.92□□□□□ -1.62
TRAPPC6B-206ENST00000556765 NDUFAF8A1L188 74 aa4.83□□□□□ -1.64
TRAPPC6B-206ENST00000556765 MUC5ACP98088 5654 aa4.8□□□□□ -1.64
TRAPPC6B-206ENST00000556765 MT1MQ8N339 61 aa4.8□□□□□ -1.64
TRAPPC6B-206ENST00000556765 MUC5BQ9HC84 5762 aaPredicted RBP4.79□□□□□ -1.64
TRAPPC6B-206ENST00000556765 KRTAP20-2Q3LI61 65 aa4.77□□□□□ -1.65
TRAPPC6B-206ENST00000556765 KRTAP4-7Q9BYR0 210 aa4.71□□□□□ -1.66
TRAPPC6B-206ENST00000556765 KRTAP4-12Q9BQ66 201 aa4.7□□□□□ -1.66
TRAPPC6B-206ENST00000556765 KRTAP4-3Q9BYR4 195 aa4.7□□□□□ -1.66
TRAPPC6B-206ENST00000556765 KRTAP9-6A8MVA2 160 aa4.62□□□□□ -1.67
TRAPPC6B-206ENST00000556765 KRTAP4-11Q9BYQ6 195 aa4.54□□□□□ -1.68
TRAPPC6B-206ENST00000556765 KRTAP12-4P60329 112 aa4.52□□□□□ -1.69
TRAPPC6B-206ENST00000556765 SYNE1Q8NF91 8797 aaKnown RBP4.49□□□□□ -1.69
TRAPPC6B-206ENST00000556765 KRTAP5-8O75690 187 aa4.46□□□□□ -1.7
TRAPPC6B-206ENST00000556765 KRTAP5-5Q701N2 237 aaPredicted RBP4.44□□□□□ -1.7
TRAPPC6B-206ENST00000556765 A0A0A0MQY5 61 aa4.41□□□□□ -1.7
TRAPPC6B-206ENST00000556765 KRTAP9-9Q9BYP9 154 aa4.41□□□□□ -1.7
TRAPPC6B-206ENST00000556765 KRTAP9-4Q9BYQ2 154 aa4.41□□□□□ -1.7
TRAPPC6B-206ENST00000556765 MT1AP04731 61 aa4.3□□□□□ -1.72
TRAPPC6B-206ENST00000556765 OBSCNQ5VST9 7968 aa4.29□□□□□ -1.72
TRAPPC6B-206ENST00000556765 KRTAP5-2Q701N4 177 aa4.24□□□□□ -1.73
TRAPPC6B-206ENST00000556765 KRTAP6-1Q3LI64 71 aa4.17□□□□□ -1.74
TRAPPC6B-206ENST00000556765 INE1O15225 51 aa4.15□□□□□ -1.75
TRAPPC6B-206ENST00000556765 KRTAP5-1Q6L8H4 278 aa3.94□□□□□ -1.78
TRAPPC6B-206ENST00000556765 MT3P25713 68 aa3.92□□□□□ -1.78
TRAPPC6B-206ENST00000556765 KRTAP6-2Q3LI66 62 aa3.91□□□□□ -1.78
TRAPPC6B-206ENST00000556765 KRTAP4-2Q9BYR5 136 aa3.9□□□□□ -1.79
TRAPPC6B-206ENST00000556765 LCE3DQ9BYE3 92 aa3.78□□□□□ -1.8
TRAPPC6B-206ENST00000556765 LCE3EQ5T5B0 92 aa3.7□□□□□ -1.82
TRAPPC6B-206ENST00000556765 LCE1EQ5T753 118 aa3.48□□□□□ -1.85
TRAPPC6B-206ENST00000556765 LCE1BQ5T7P3 118 aa3.37□□□□□ -1.87
TRAPPC6B-206ENST00000556765 LCE1CQ5T751 118 aa3.24□□□□□ -1.89
TRAPPC6B-206ENST00000556765 PHGR1C9JFL3 82 aa3.22□□□□□ -1.89
TRAPPC6B-206ENST00000556765 KRTAP5-11Q6L8G4 156 aa3.19□□□□□ -1.9
TRAPPC6B-206ENST00000556765 PRM1P04553 51 aa3.18□□□□□ -1.9
TRAPPC6B-206ENST00000556765 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
TRAPPC6B-206ENST00000556765 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.99□□□□□ -1.93
TRAPPC6B-206ENST00000556765 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
TRAPPC6B-206ENST00000556765 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
TRAPPC6B-206ENST00000556765 KRTAP4-4Q9BYR3 166 aa2.51□□□□□ -2.01
TRAPPC6B-206ENST00000556765 KRTAP21-1Q3LI58 79 aa2.45□□□□□ -2.02
TRAPPC6B-206ENST00000556765 MUC16Q8WXI7 14507 aa1.88□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 11.2 ms