RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 MROH2AA6NES4 1674 aa-3.01□□□□□ -2.89
SNX6-204ENST00000555541 RB1CC1Q8TDY2 1594 aa-3.02□□□□□ -2.89
SNX6-204ENST00000555541 UGGT2Q9NYU1 1516 aa-3.03□□□□□ -2.89
SNX6-204ENST00000555541 UGGT1Q9NYU2 1555 aa-3.03□□□□□ -2.89
SNX6-204ENST00000555541 ASPMQ8IZT6 3477 aa-3.03□□□□□ -2.9
SNX6-204ENST00000555541 CENPFP49454 3210 aa-3.04□□□□□ -2.9
SNX6-204ENST00000555541 CCDC180Q9P1Z9 1646 aa-3.04□□□□□ -2.9
SNX6-204ENST00000555541 DNAH12Q6ZR08 3092 aa-3.05□□□□□ -2.9
SNX6-204ENST00000555541 SCRIBQ14160 1630 aa-3.06□□□□□ -2.9
SNX6-204ENST00000555541 LMO7Q8WWI1 1683 aa-3.07□□□□□ -2.9
SNX6-204ENST00000555541 SMIM2Q9BVW6 85 aa-3.09□□□□□ -2.9
SNX6-204ENST00000555541 PDCD5O14737 125 aa-3.1□□□□□ -2.91
SNX6-204ENST00000555541 SMCO4Q9NRQ5 59 aa-3.1□□□□□ -2.91
SNX6-204ENST00000555541 PLNP26678 52 aa-3.11□□□□□ -2.91
SNX6-204ENST00000555541 NRXN3Q9Y4C0 1643 aa-3.13□□□□□ -2.91
SNX6-204ENST00000555541 CPS1P31327 1500 aa-3.14□□□□□ -2.91
SNX6-204ENST00000555541 AGLP35573 1532 aa-3.14□□□□□ -2.91
SNX6-204ENST00000555541 CDH23Q9H251 3354 aa-3.17□□□□□ -2.92
SNX6-204ENST00000555541 BRCA2P51587 3418 aa-3.2□□□□□ -2.92
SNX6-204ENST00000555541 DEFB133Q30KQ1 61 aa-3.21□□□□□ -2.92
SNX6-204ENST00000555541 TRPM2O94759 1503 aa-3.24□□□□□ -2.93
SNX6-204ENST00000555541 RHPN1-AS1Q9BWJ2 59 aa-3.24□□□□□ -2.93
SNX6-204ENST00000555541 EFCAB5A4FU69 1503 aa-3.24□□□□□ -2.93
SNX6-204ENST00000555541 VPS13AQ96RL7 3174 aa-3.25□□□□□ -2.93
SNX6-204ENST00000555541 XIRP2A4UGR9 3374 aa-3.27□□□□□ -2.93
SNX6-204ENST00000555541 ABCA10Q8WWZ4 1543 aa-3.28□□□□□ -2.93
SNX6-204ENST00000555541 CLTCL1P53675 1640 aa-3.28□□□□□ -2.93
SNX6-204ENST00000555541 ABCA5Q8WWZ7 1642 aa-3.29□□□□□ -2.94
SNX6-204ENST00000555541 TOMM7Q9P0U1 55 aa-3.29□□□□□ -2.94
SNX6-204ENST00000555541 A0A087WWC5 75 aa-3.31□□□□□ -2.94
SNX6-204ENST00000555541 HTN1P15515 57 aa-3.32□□□□□ -2.94
SNX6-204ENST00000555541 LINC01590Q5TEZ4 76 aa-3.32□□□□□ -2.94
SNX6-204ENST00000555541 DDX60Q8IY21 1712 aaKnown RBP-3.33□□□□□ -2.94
SNX6-204ENST00000555541 CD52P31358 61 aa-3.34□□□□□ -2.94
SNX6-204ENST00000555541 NDUFA1O15239 70 aa-3.35□□□□□ -2.95
SNX6-204ENST00000555541 A0A096LNI7 61 aa-3.36□□□□□ -2.95
SNX6-204ENST00000555541 SMIM5Q71RC9 77 aa-3.36□□□□□ -2.95
SNX6-204ENST00000555541 NFAT5O94916 1531 aa-3.37□□□□□ -2.95
SNX6-204ENST00000555541 PRXQ9BXM0 1461 aa-3.38□□□□□ -2.95
SNX6-204ENST00000555541 IQGAP1P46940 1657 aa-3.39□□□□□ -2.95
SNX6-204ENST00000555541 UTRNP46939 3433 aa-3.4□□□□□ -2.95
SNX6-204ENST00000555541 CMC2Q9NRP2 79 aa-3.45□□□□□ -2.96
SNX6-204ENST00000555541 ABCC8Q09428 1581 aa-3.49□□□□□ -2.97
SNX6-204ENST00000555541 FANCD2Q9BXW9 1451 aa-3.5□□□□□ -2.97
SNX6-204ENST00000555541 ADCY10Q96PN6 1610 aa-3.51□□□□□ -2.97
SNX6-204ENST00000555541 DEFB124Q8NES8 71 aa-3.56□□□□□ -2.98
SNX6-204ENST00000555541 DEFB104AQ8WTQ1 72 aa-3.6□□□□□ -2.99
SNX6-204ENST00000555541 DUOX1Q9NRD9 1551 aa-3.63□□□□□ -2.99
SNX6-204ENST00000555541 ERICH3Q5RHP9 1530 aa-3.65□□□□□ -2.99
SNX6-204ENST00000555541 GOLGB1Q14789 3259 aaKnown RBP-3.66□□□□□ -3
SNX6-204ENST00000555541 RPL39P62891 51 aaKnown RBP-3.68□□□□□ -3
SNX6-204ENST00000555541 SAMD9LQ8IVG5 1584 aa-3.72□□□□□ -3
SNX6-204ENST00000555541 TOP2AP11388 1531 aaKnown RBP-3.75□□□□□ -3.01
SNX6-204ENST00000555541 LINC01556Q5JQF7 62 aa-3.78□□□□□ -3.01
SNX6-204ENST00000555541 RPL39LQ96EH5 51 aaKnown RBP-3.8□□□□□ -3.02
SNX6-204ENST00000555541 ATP7AQ04656 1500 aa-3.89□□□□□ -3.03
SNX6-204ENST00000555541 SMIM31A0A1B0GVY4 71 aa-3.93□□□□□ -3.04
SNX6-204ENST00000555541 H3BUX3 64 aa-3.93□□□□□ -3.04
SNX6-204ENST00000555541 MROH2BQ7Z745 1585 aa-3.97□□□□□ -3.04
SNX6-204ENST00000555541 SNRPGP15A8MWD9 76 aa-3.99□□□□□ -3.05
SNX6-204ENST00000555541 APELAP0DMC3 54 aa-4.16□□□□□ -3.08
SNX6-204ENST00000555541 TOMM5Q8N4H5 51 aa-4.17□□□□□ -3.08
SNX6-204ENST00000555541 IQGAP2Q13576 1575 aa-4.18□□□□□ -3.08
SNX6-204ENST00000555541 A0A096LPF7 62 aa-4.21□□□□□ -3.08
SNX6-204ENST00000555541 K7EIM0 57 aa-4.22□□□□□ -3.08
SNX6-204ENST00000555541 ARHGAP5-AS1Q96IT6 56 aa-4.32□□□□□ -3.1
SNX6-204ENST00000555541 PRCDQ00LT1 54 aa-4.35□□□□□ -3.11
SNX6-204ENST00000555541 HTN3P15516 51 aa-4.38□□□□□ -3.11
SNX6-204ENST00000555541 TMEM167AQ8TBQ9 72 aa-4.42□□□□□ -3.12
SNX6-204ENST00000555541 H3BSH0 61 aa-4.58□□□□□ -3.14
SNX6-204ENST00000555541 SNRPGP62308 76 aaKnown RBP-4.69□□□□□ -3.16
SNX6-204ENST00000555541 Q9Y3F1 56 aa-4.69□□□□□ -3.16
SNX6-204ENST00000555541 RPL39P5Q59GN2 51 aa-4.76□□□□□ -3.17
SNX6-204ENST00000555541 GCC2Q8IWJ2 1684 aa-4.81□□□□□ -3.18
SNX6-204ENST00000555541 DEFB108AA8MXU0 73 aa-4.82□□□□□ -3.18
SNX6-204ENST00000555541 COX14Q96I36 57 aa-4.93□□□□□ -3.2
SNX6-204ENST00000555541 DEFB108BQ8NET1 73 aa-5.04□□□□□ -3.22
SNX6-204ENST00000555541 STATHP02808 62 aa-5.09□□□□□ -3.22
Retrieved 78 of 20,778 RNA–protein pairs in 83.2 ms