RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 SPRR2AP35326 72 aa6.84□□□□□ -1.31
PSEN1-212ENST00000555254 SVIPQ8NHG7 77 aa6.84□□□□□ -1.31
PSEN1-212ENST00000555254 LCE3AQ5TA76 89 aa6.83□□□□□ -1.32
PSEN1-212ENST00000555254 KRTAP4-8A0A0G2JLE6 195 aa6.82□□□□□ -1.32
PSEN1-212ENST00000555254 KRTAP4-8Q9BYQ9 185 aa6.82□□□□□ -1.32
PSEN1-212ENST00000555254 SPRR2FQ96RM1 72 aa6.81□□□□□ -1.32
PSEN1-212ENST00000555254 LCE1AQ5T7P2 110 aa6.64□□□□□ -1.35
PSEN1-212ENST00000555254 SPRR2DP22532 72 aa6.61□□□□□ -1.35
PSEN1-212ENST00000555254 KRTAP12-3P60328 96 aa6.6□□□□□ -1.35
PSEN1-212ENST00000555254 KRTAP19-5Q3LI72 72 aa6.58□□□□□ -1.36
PSEN1-212ENST00000555254 DSTQ03001 7570 aaKnown RBP6.53□□□□□ -1.36
PSEN1-212ENST00000555254 LCE3BQ5TA77 95 aa6.53□□□□□ -1.36
PSEN1-212ENST00000555254 KRTAP19-7Q3SYF9 63 aa6.46□□□□□ -1.38
PSEN1-212ENST00000555254 KRTAP15-1Q3LI76 137 aa6.45□□□□□ -1.38
PSEN1-212ENST00000555254 KRTAP4-9Q9BYQ8 210 aa6.41□□□□□ -1.38
PSEN1-212ENST00000555254 MT1EP04732 61 aa6.4□□□□□ -1.38
PSEN1-212ENST00000555254 KRTAP19-4Q3LI73 84 aa6.28□□□□□ -1.4
PSEN1-212ENST00000555254 MT1LQ93083 61 aa6.26□□□□□ -1.41
PSEN1-212ENST00000555254 KRTAP19-3Q7Z4W3 81 aa6.23□□□□□ -1.41
PSEN1-212ENST00000555254 LCE5AQ5TCM9 118 aa6.2□□□□□ -1.42
PSEN1-212ENST00000555254 KRTAP5-10Q6L8G5 202 aa6.2□□□□□ -1.42
PSEN1-212ENST00000555254 AHNAK2Q8IVF2 5795 aa6.2□□□□□ -1.42
PSEN1-212ENST00000555254 HMCN1Q96RW7 5635 aa6.18□□□□□ -1.42
PSEN1-212ENST00000555254 MT1GP13640 62 aa6.16□□□□□ -1.42
PSEN1-212ENST00000555254 LCE3CQ5T5A8 94 aa6.15□□□□□ -1.42
PSEN1-212ENST00000555254 LCE1DQ5T752 114 aa6.11□□□□□ -1.43
PSEN1-212ENST00000555254 KRTAP5-7Q6L8G8 165 aa6.07□□□□□ -1.44
PSEN1-212ENST00000555254 MT1MQ8N339 61 aa6.04□□□□□ -1.44
PSEN1-212ENST00000555254 SPRR5A0A1B0GTR4 108 aa5.98□□□□□ -1.45
PSEN1-212ENST00000555254 KRTAP4-7Q9BYR0 210 aa5.98□□□□□ -1.45
PSEN1-212ENST00000555254 KRTAP4-3Q9BYR4 195 aa5.92□□□□□ -1.46
PSEN1-212ENST00000555254 MT4P47944 62 aa5.91□□□□□ -1.46
PSEN1-212ENST00000555254 LUZP6Q538Z0 58 aa5.9□□□□□ -1.46
PSEN1-212ENST00000555254 KRTAP5-3Q6L8H2 238 aa5.8□□□□□ -1.48
PSEN1-212ENST00000555254 LCE4AQ5TA78 99 aa5.74□□□□□ -1.49
PSEN1-212ENST00000555254 KRTAP9-6A8MVA2 160 aa5.7□□□□□ -1.5
PSEN1-212ENST00000555254 KRTAP4-6Q9BYQ5 205 aa5.67□□□□□ -1.5
PSEN1-212ENST00000555254 LOC100996750A0A140TA64 210 aa5.63□□□□□ -1.51
PSEN1-212ENST00000555254 NDUFAF8A1L188 74 aa5.56□□□□□ -1.52
PSEN1-212ENST00000555254 KRTAP5-4Q6L8H1 288 aa5.56□□□□□ -1.52
PSEN1-212ENST00000555254 AHNAKQ09666 5890 aaKnown RBP5.45□□□□□ -1.54
PSEN1-212ENST00000555254 KRTAP5-5Q701N2 237 aaPredicted RBP5.45□□□□□ -1.54
PSEN1-212ENST00000555254 MT1AP04731 61 aa5.35□□□□□ -1.55
PSEN1-212ENST00000555254 MUC5ACP98088 5654 aa5.34□□□□□ -1.56
PSEN1-212ENST00000555254 KRTAP12-4P60329 112 aa5.32□□□□□ -1.56
PSEN1-212ENST00000555254 KRTAP20-2Q3LI61 65 aa5.27□□□□□ -1.57
PSEN1-212ENST00000555254 KRTAP6-1Q3LI64 71 aa5.25□□□□□ -1.57
PSEN1-212ENST00000555254 SYNE1Q8NF91 8797 aaKnown RBP5.21□□□□□ -1.58
PSEN1-212ENST00000555254 MUC5BQ9HC84 5762 aaPredicted RBP5.19□□□□□ -1.58
PSEN1-212ENST00000555254 KRTAP9-4Q9BYQ2 154 aa5.1□□□□□ -1.59
PSEN1-212ENST00000555254 KRTAP4-11Q9BYQ6 195 aa5.06□□□□□ -1.6
PSEN1-212ENST00000555254 KRTAP5-8O75690 187 aa5.02□□□□□ -1.61
PSEN1-212ENST00000555254 A0A0A0MQY5 61 aa4.97□□□□□ -1.61
PSEN1-212ENST00000555254 KRTAP5-2Q701N4 177 aa4.91□□□□□ -1.62
PSEN1-212ENST00000555254 MT3P25713 68 aa4.9□□□□□ -1.63
PSEN1-212ENST00000555254 KRTAP6-2Q3LI66 62 aa4.9□□□□□ -1.63
PSEN1-212ENST00000555254 KRTAP9-9Q9BYP9 154 aa4.81□□□□□ -1.64
PSEN1-212ENST00000555254 OBSCNQ5VST9 7968 aa4.71□□□□□ -1.66
PSEN1-212ENST00000555254 H3BS24 57 aa4.65□□□□□ -1.67
PSEN1-212ENST00000555254 INE1O15225 51 aa4.65□□□□□ -1.67
PSEN1-212ENST00000555254 LCE3DQ9BYE3 92 aa4.62□□□□□ -1.67
PSEN1-212ENST00000555254 LCE3EQ5T5B0 92 aa4.49□□□□□ -1.69
PSEN1-212ENST00000555254 KRTAP5-1Q6L8H4 278 aa4.38□□□□□ -1.71
PSEN1-212ENST00000555254 LCE1EQ5T753 118 aa4.26□□□□□ -1.73
PSEN1-212ENST00000555254 LCE1BQ5T7P3 118 aa4.09□□□□□ -1.75
PSEN1-212ENST00000555254 KRTAP4-2Q9BYR5 136 aa4.01□□□□□ -1.77
PSEN1-212ENST00000555254 LCE1CQ5T751 118 aa3.96□□□□□ -1.78
PSEN1-212ENST00000555254 PRM1P04553 51 aa3.82□□□□□ -1.8
PSEN1-212ENST00000555254 KRTAP4-12Q9BQ66 201 aa3.77□□□□□ -1.81
PSEN1-212ENST00000555254 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.65□□□□□ -1.83
PSEN1-212ENST00000555254 PHGR1C9JFL3 82 aa3.64□□□□□ -1.83
PSEN1-212ENST00000555254 KRTAP5-11Q6L8G4 156 aa3.55□□□□□ -1.84
PSEN1-212ENST00000555254 KRTAP21-2Q3LI59 83 aa3.42□□□□□ -1.86
PSEN1-212ENST00000555254 LCE1FQ5T754 118 aa3.4□□□□□ -1.87
PSEN1-212ENST00000555254 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
PSEN1-212ENST00000555254 MUC19Q7Z5P9 8384 aa2.98□□□□□ -1.93
PSEN1-212ENST00000555254 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
PSEN1-212ENST00000555254 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 115.5 ms