RNA–Protein interactions for RNA: ENST00000554756.1

RIPK3-204, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-204ENST00000554756 SPRR2FQ96RM1 72 aa4.73□□□□□ -1.65
RIPK3-204ENST00000554756 LCE3AQ5TA76 89 aa4.7□□□□□ -1.66
RIPK3-204ENST00000554756 NDUFAF8A1L188 74 aa4.68□□□□□ -1.66
RIPK3-204ENST00000554756 LUZP6Q538Z0 58 aa4.65□□□□□ -1.67
RIPK3-204ENST00000554756 SPRR5A0A1B0GTR4 108 aa4.64□□□□□ -1.67
RIPK3-204ENST00000554756 SPRR2EP22531 72 aa4.62□□□□□ -1.67
RIPK3-204ENST00000554756 SPRR2BP35325 72 aa4.62□□□□□ -1.67
RIPK3-204ENST00000554756 SPRR2AP35326 72 aa4.62□□□□□ -1.67
RIPK3-204ENST00000554756 KRTAP2-2Q9BYT5 123 aa4.59□□□□□ -1.67
RIPK3-204ENST00000554756 KRTAP2-1Q9BYU5 128 aa4.59□□□□□ -1.67
RIPK3-204ENST00000554756 LCE1AQ5T7P2 110 aa4.56□□□□□ -1.68
RIPK3-204ENST00000554756 KRTAP12-3P60328 96 aa4.55□□□□□ -1.68
RIPK3-204ENST00000554756 KRTAP19-7Q3SYF9 63 aa4.51□□□□□ -1.69
RIPK3-204ENST00000554756 KRTAP19-5Q3LI72 72 aa4.48□□□□□ -1.69
RIPK3-204ENST00000554756 SPRR2DP22532 72 aa4.48□□□□□ -1.69
RIPK3-204ENST00000554756 MT1EP04732 61 aa4.47□□□□□ -1.69
RIPK3-204ENST00000554756 A0A0A0MQY5 61 aa4.4□□□□□ -1.71
RIPK3-204ENST00000554756 KRTAP19-4Q3LI73 84 aa4.37□□□□□ -1.71
RIPK3-204ENST00000554756 KRTAP19-3Q7Z4W3 81 aa4.37□□□□□ -1.71
RIPK3-204ENST00000554756 LCE3BQ5TA77 95 aa4.37□□□□□ -1.71
RIPK3-204ENST00000554756 LCE5AQ5TCM9 118 aa4.35□□□□□ -1.71
RIPK3-204ENST00000554756 MT1LQ93083 61 aa4.31□□□□□ -1.72
RIPK3-204ENST00000554756 MT1GP13640 62 aa4.29□□□□□ -1.72
RIPK3-204ENST00000554756 GPR98Q8WXG9 6306 aa4.28□□□□□ -1.72
RIPK3-204ENST00000554756 LCE3CQ5T5A8 94 aa4.27□□□□□ -1.73
RIPK3-204ENST00000554756 MT1MQ8N339 61 aa4.24□□□□□ -1.73
RIPK3-204ENST00000554756 KRTAP4-3Q9BYR4 195 aa4.17□□□□□ -1.74
RIPK3-204ENST00000554756 KRTAP4-7Q9BYR0 210 aa4.14□□□□□ -1.75
RIPK3-204ENST00000554756 DSTQ03001 7570 aaKnown RBP4.11□□□□□ -1.75
RIPK3-204ENST00000554756 KRTAP4-9Q9BYQ8 210 aa4.07□□□□□ -1.76
RIPK3-204ENST00000554756 KRTAP9-6A8MVA2 160 aa3.99□□□□□ -1.77
RIPK3-204ENST00000554756 INE1O15225 51 aa3.97□□□□□ -1.77
RIPK3-204ENST00000554756 LCE1DQ5T752 114 aa3.97□□□□□ -1.77
RIPK3-204ENST00000554756 LCE4AQ5TA78 99 aa3.97□□□□□ -1.77
RIPK3-204ENST00000554756 HMCN1Q96RW7 5635 aa3.93□□□□□ -1.78
RIPK3-204ENST00000554756 LOC100996750A0A140TA64 210 aa3.91□□□□□ -1.78
RIPK3-204ENST00000554756 AHNAK2Q8IVF2 5795 aa3.9□□□□□ -1.79
RIPK3-204ENST00000554756 MT4P47944 62 aa3.89□□□□□ -1.79
RIPK3-204ENST00000554756 KRTAP5-4Q6L8H1 288 aa3.89□□□□□ -1.79
RIPK3-204ENST00000554756 KRTAP5-10Q6L8G5 202 aa3.84□□□□□ -1.79
RIPK3-204ENST00000554756 KRTAP5-5Q701N2 237 aaPredicted RBP3.84□□□□□ -1.79
RIPK3-204ENST00000554756 KRTAP4-6Q9BYQ5 205 aa3.8□□□□□ -1.8
RIPK3-204ENST00000554756 KRTAP5-7Q6L8G8 165 aa3.76□□□□□ -1.81
RIPK3-204ENST00000554756 KRTAP12-4P60329 112 aa3.7□□□□□ -1.82
RIPK3-204ENST00000554756 KRTAP5-3Q6L8H2 238 aa3.69□□□□□ -1.82
RIPK3-204ENST00000554756 KRTAP20-2Q3LI61 65 aa3.67□□□□□ -1.82
RIPK3-204ENST00000554756 MT1AP04731 61 aa3.66□□□□□ -1.82
RIPK3-204ENST00000554756 KRTAP6-1Q3LI64 71 aa3.64□□□□□ -1.83
RIPK3-204ENST00000554756 SYNE1Q8NF91 8797 aaKnown RBP3.59□□□□□ -1.83
RIPK3-204ENST00000554756 KRTAP9-4Q9BYQ2 154 aa3.53□□□□□ -1.84
RIPK3-204ENST00000554756 KRTAP6-2Q3LI66 62 aa3.44□□□□□ -1.86
RIPK3-204ENST00000554756 KRTAP5-2Q701N4 177 aa3.44□□□□□ -1.86
RIPK3-204ENST00000554756 KRTAP4-11Q9BYQ6 195 aa3.36□□□□□ -1.87
RIPK3-204ENST00000554756 MT3P25713 68 aa3.34□□□□□ -1.87
RIPK3-204ENST00000554756 AHNAKQ09666 5890 aaKnown RBP3.34□□□□□ -1.87
RIPK3-204ENST00000554756 MUC5ACP98088 5654 aa3.27□□□□□ -1.89
RIPK3-204ENST00000554756 MUC5BQ9HC84 5762 aaPredicted RBP3.26□□□□□ -1.89
RIPK3-204ENST00000554756 LCE3DQ9BYE3 92 aa3.25□□□□□ -1.89
RIPK3-204ENST00000554756 KRTAP5-8O75690 187 aa3.23□□□□□ -1.89
RIPK3-204ENST00000554756 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
RIPK3-204ENST00000554756 KRTAP9-9Q9BYP9 154 aa3.18□□□□□ -1.9
RIPK3-204ENST00000554756 OBSCNQ5VST9 7968 aa3.07□□□□□ -1.92
RIPK3-204ENST00000554756 KRTAP5-1Q6L8H4 278 aa3.05□□□□□ -1.92
RIPK3-204ENST00000554756 LCE1EQ5T753 118 aa2.99□□□□□ -1.93
RIPK3-204ENST00000554756 PRM1P04553 51 aa2.9□□□□□ -1.94
RIPK3-204ENST00000554756 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
RIPK3-204ENST00000554756 KRTAP4-2Q9BYR5 136 aa2.83□□□□□ -1.96
RIPK3-204ENST00000554756 LCE1CQ5T751 118 aa2.77□□□□□ -1.97
RIPK3-204ENST00000554756 KRTAP4-12Q9BQ66 201 aa2.57□□□□□ -2
RIPK3-204ENST00000554756 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
RIPK3-204ENST00000554756 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
RIPK3-204ENST00000554756 KRTAP5-11Q6L8G4 156 aa2.49□□□□□ -2.01
RIPK3-204ENST00000554756 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
RIPK3-204ENST00000554756 PHGR1C9JFL3 82 aa2.27□□□□□ -2.05
RIPK3-204ENST00000554756 KRTAP4-4Q9BYR3 166 aa2.2□□□□□ -2.06
RIPK3-204ENST00000554756 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
RIPK3-204ENST00000554756 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
RIPK3-204ENST00000554756 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 91.9 ms