RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 SERP1Q9Y6X1 66 aa4.05□□□□□ -1.76
PTCD2P1-201ENST00000554393 PRAC1Q96KF2 57 aa4□□□□□ -1.77
PTCD2P1-201ENST00000554393 LCE1EQ5T753 118 aa3.99□□□□□ -1.77
PTCD2P1-201ENST00000554393 KRTAP5-10Q6L8G5 202 aa3.99□□□□□ -1.77
PTCD2P1-201ENST00000554393 A0A1B0GU33 70 aa3.98□□□□□ -1.77
PTCD2P1-201ENST00000554393 A0A0D9SG42 100 aa3.97□□□□□ -1.77
PTCD2P1-201ENST00000554393 RPS28P62857 69 aaKnown RBP3.96□□□□□ -1.78
PTCD2P1-201ENST00000554393 SPATA8Q6RVD6 105 aa3.96□□□□□ -1.78
PTCD2P1-201ENST00000554393 NDUFAF8A1L188 74 aa3.95□□□□□ -1.78
PTCD2P1-201ENST00000554393 KRTAP5-7Q6L8G8 165 aa3.95□□□□□ -1.78
PTCD2P1-201ENST00000554393 SPRR5A0A1B0GTR4 108 aa3.92□□□□□ -1.78
PTCD2P1-201ENST00000554393 KRTAP12-1P59990 96 aa3.92□□□□□ -1.78
PTCD2P1-201ENST00000554393 LCE1FQ5T754 118 aa3.92□□□□□ -1.78
PTCD2P1-201ENST00000554393 V9GYY9 64 aa3.92□□□□□ -1.78
PTCD2P1-201ENST00000554393 A0A1B0GU69 56 aa3.91□□□□□ -1.78
PTCD2P1-201ENST00000554393 KRTAP19-7Q3SYF9 63 aa3.91□□□□□ -1.78
PTCD2P1-201ENST00000554393 SPINT4Q6UDR6 99 aa3.91□□□□□ -1.78
PTCD2P1-201ENST00000554393 SMIM26A0A096LP01 95 aa3.89□□□□□ -1.79
PTCD2P1-201ENST00000554393 MT1EP04732 61 aa3.88□□□□□ -1.79
PTCD2P1-201ENST00000554393 PRR15LQ9BU68 103 aa3.88□□□□□ -1.79
PTCD2P1-201ENST00000554393 KRTAP19-3Q7Z4W3 81 aa3.86□□□□□ -1.79
PTCD2P1-201ENST00000554393 Q1T7F1 81 aa3.83□□□□□ -1.8
PTCD2P1-201ENST00000554393 LINC01558Q9Y6Z2 57 aa3.83□□□□□ -1.8
PTCD2P1-201ENST00000554393 A8MU10 97 aa3.81□□□□□ -1.8
PTCD2P1-201ENST00000554393 KRTAP19-5Q3LI72 72 aa3.79□□□□□ -1.8
PTCD2P1-201ENST00000554393 MT1GP13640 62 aa3.77□□□□□ -1.81
PTCD2P1-201ENST00000554393 TNP1P09430 55 aa3.75□□□□□ -1.81
PTCD2P1-201ENST00000554393 PP632Q6XCG6 107 aa3.75□□□□□ -1.81
PTCD2P1-201ENST00000554393 MT4P47944 62 aa3.74□□□□□ -1.81
PTCD2P1-201ENST00000554393 C10orf95Q9H7T3 257 aa3.74□□□□□ -1.81
PTCD2P1-201ENST00000554393 KRTAP5-1Q6L8H4 278 aa3.73□□□□□ -1.81
PTCD2P1-201ENST00000554393 UQCR11O14957 56 aa3.72□□□□□ -1.81
PTCD2P1-201ENST00000554393 AHNAKQ09666 5890 aaKnown RBP3.72□□□□□ -1.81
PTCD2P1-201ENST00000554393 LCE3AQ5TA76 89 aa3.71□□□□□ -1.82
PTCD2P1-201ENST00000554393 MT1LQ93083 61 aa3.71□□□□□ -1.82
PTCD2P1-201ENST00000554393 PSPHP1O15172 72 aa3.69□□□□□ -1.82
PTCD2P1-201ENST00000554393 MT1MQ8N339 61 aa3.69□□□□□ -1.82
PTCD2P1-201ENST00000554393 LCE3CQ5T5A8 94 aa3.67□□□□□ -1.82
PTCD2P1-201ENST00000554393 A6NED7 52 aa3.65□□□□□ -1.83
PTCD2P1-201ENST00000554393 KRTAP5-4Q6L8H1 288 aa3.64□□□□□ -1.83
PTCD2P1-201ENST00000554393 MIR22HGQ0VDD5 57 aa3.63□□□□□ -1.83
PTCD2P1-201ENST00000554393 KRTAP4-4Q9BYR3 166 aa3.6□□□□□ -1.83
PTCD2P1-201ENST00000554393 K7ERS5 55 aa3.59□□□□□ -1.83
PTCD2P1-201ENST00000554393 KRTAP12-3P60328 96 aa3.59□□□□□ -1.83
PTCD2P1-201ENST00000554393 CDC42SE1Q9NRR8 79 aa3.59□□□□□ -1.83
PTCD2P1-201ENST00000554393 KRTAP9-6A8MVA2 160 aa3.56□□□□□ -1.84
PTCD2P1-201ENST00000554393 KRTAP4-3Q9BYR4 195 aa3.56□□□□□ -1.84
PTCD2P1-201ENST00000554393 MUC5ACP98088 5654 aa3.56□□□□□ -1.84
PTCD2P1-201ENST00000554393 KRTAP25-1Q3LHN0 102 aa3.55□□□□□ -1.84
PTCD2P1-201ENST00000554393 MUC5BQ9HC84 5762 aaPredicted RBP3.54□□□□□ -1.84
PTCD2P1-201ENST00000554393 BRK1Q8WUW1 75 aa3.5□□□□□ -1.85
PTCD2P1-201ENST00000554393 PRO0628Q9UI54 55 aa3.42□□□□□ -1.86
PTCD2P1-201ENST00000554393 KRTAP5-5Q701N2 237 aaPredicted RBP3.4□□□□□ -1.87
PTCD2P1-201ENST00000554393 PMAIP1Q13794 54 aa3.34□□□□□ -1.87
PTCD2P1-201ENST00000554393 LCE3EQ5T5B0 92 aa3.34□□□□□ -1.87
PTCD2P1-201ENST00000554393 ROMO1P60602 79 aa3.33□□□□□ -1.88
PTCD2P1-201ENST00000554393 KRTAP20-2Q3LI61 65 aa3.33□□□□□ -1.88
PTCD2P1-201ENST00000554393 KRTAP12-4P60329 112 aa3.31□□□□□ -1.88
PTCD2P1-201ENST00000554393 SYNE1Q8NF91 8797 aaKnown RBP3.24□□□□□ -1.89
PTCD2P1-201ENST00000554393 KRTAP5-8O75690 187 aa3.19□□□□□ -1.9
PTCD2P1-201ENST00000554393 KTN1-AS1Q86SY8 53 aa3.19□□□□□ -1.9
PTCD2P1-201ENST00000554393 OBSCNQ5VST9 7968 aa3.17□□□□□ -1.9
PTCD2P1-201ENST00000554393 MT1AP04731 61 aa3.16□□□□□ -1.9
PTCD2P1-201ENST00000554393 KRTAP6-1Q3LI64 71 aa3.12□□□□□ -1.91
PTCD2P1-201ENST00000554393 KRTAP5-2Q701N4 177 aa3.11□□□□□ -1.91
PTCD2P1-201ENST00000554393 KRTAP6-2Q3LI66 62 aa2.98□□□□□ -1.93
PTCD2P1-201ENST00000554393 LCE3DQ9BYE3 92 aa2.74□□□□□ -1.97
PTCD2P1-201ENST00000554393 LUZP6Q538Z0 58 aa2.66□□□□□ -1.98
PTCD2P1-201ENST00000554393 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
PTCD2P1-201ENST00000554393 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
PTCD2P1-201ENST00000554393 PHGR1C9JFL3 82 aa2.37□□□□□ -2.03
PTCD2P1-201ENST00000554393 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
PTCD2P1-201ENST00000554393 INE1O15225 51 aa2.1□□□□□ -2.07
PTCD2P1-201ENST00000554393 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
PTCD2P1-201ENST00000554393 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
PTCD2P1-201ENST00000554393 PRM1P04553 51 aa1.68□□□□□ -2.14
PTCD2P1-201ENST00000554393 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 32.1 ms