RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 K7ERS5 55 aa2.52□□□□□ -2.01
LINC00517-202ENST00000554257 TNP1P09430 55 aa2.52□□□□□ -2.01
LINC00517-202ENST00000554257 MT1EP04732 61 aa2.52□□□□□ -2.01
LINC00517-202ENST00000554257 KTN1-AS1Q86SY8 53 aa2.51□□□□□ -2.01
LINC00517-202ENST00000554257 MDN1Q9NU22 5596 aa2.51□□□□□ -2.01
LINC00517-202ENST00000554257 KRTAP19-5Q3LI72 72 aa2.51□□□□□ -2.01
LINC00517-202ENST00000554257 LCE1AQ5T7P2 110 aa2.47□□□□□ -2.01
LINC00517-202ENST00000554257 SPRR2FQ96RM1 72 aa2.45□□□□□ -2.02
LINC00517-202ENST00000554257 LCE5AQ5TCM9 118 aa2.44□□□□□ -2.02
LINC00517-202ENST00000554257 MT1LQ93083 61 aa2.44□□□□□ -2.02
LINC00517-202ENST00000554257 NEBP20929 6669 aa2.43□□□□□ -2.02
LINC00517-202ENST00000554257 SPRR5A0A1B0GTR4 108 aa2.42□□□□□ -2.02
LINC00517-202ENST00000554257 PMAIP1Q13794 54 aa2.42□□□□□ -2.02
LINC00517-202ENST00000554257 KRTAP12-3P60328 96 aa2.42□□□□□ -2.02
LINC00517-202ENST00000554257 KRTAP19-3Q7Z4W3 81 aa2.41□□□□□ -2.02
LINC00517-202ENST00000554257 PP632Q6XCG6 107 aa2.4□□□□□ -2.03
LINC00517-202ENST00000554257 SPRR2EP22531 72 aa2.37□□□□□ -2.03
LINC00517-202ENST00000554257 SPRR2BP35325 72 aa2.37□□□□□ -2.03
LINC00517-202ENST00000554257 SPRR2AP35326 72 aa2.37□□□□□ -2.03
LINC00517-202ENST00000554257 MT1MQ8N339 61 aa2.37□□□□□ -2.03
LINC00517-202ENST00000554257 MT1GP13640 62 aa2.36□□□□□ -2.03
LINC00517-202ENST00000554257 PRAC1Q96KF2 57 aa2.35□□□□□ -2.03
LINC00517-202ENST00000554257 KRTAP15-1Q3LI76 137 aa2.34□□□□□ -2.04
LINC00517-202ENST00000554257 KRTAP19-4Q3LI73 84 aa2.32□□□□□ -2.04
LINC00517-202ENST00000554257 KRTAP4-3Q9BYR4 195 aa2.32□□□□□ -2.04
LINC00517-202ENST00000554257 SPRR2DP22532 72 aa2.29□□□□□ -2.04
LINC00517-202ENST00000554257 LCE3CQ5T5A8 94 aa2.29□□□□□ -2.04
LINC00517-202ENST00000554257 KRTAP9-6A8MVA2 160 aa2.26□□□□□ -2.05
LINC00517-202ENST00000554257 KRTAP5-5Q701N2 237 aaPredicted RBP2.25□□□□□ -2.05
LINC00517-202ENST00000554257 KRTAP2-3P0C7H8 128 aa2.23□□□□□ -2.05
LINC00517-202ENST00000554257 KRTAP2-4Q9BYR9 128 aa2.23□□□□□ -2.05
LINC00517-202ENST00000554257 KRTAP20-1Q3LI63 56 aa2.22□□□□□ -2.05
LINC00517-202ENST00000554257 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.21□□□□□ -2.06
LINC00517-202ENST00000554257 HMCN1Q96RW7 5635 aa2.21□□□□□ -2.06
LINC00517-202ENST00000554257 KRTAP5-4Q6L8H1 288 aa2.2□□□□□ -2.06
LINC00517-202ENST00000554257 LCE4AQ5TA78 99 aa2.19□□□□□ -2.06
LINC00517-202ENST00000554257 KRTAP2-2Q9BYT5 123 aa2.18□□□□□ -2.06
LINC00517-202ENST00000554257 KRTAP2-1Q9BYU5 128 aa2.18□□□□□ -2.06
LINC00517-202ENST00000554257 DSTQ03001 7570 aaKnown RBP2.18□□□□□ -2.06
LINC00517-202ENST00000554257 MT1AP04731 61 aa2.06□□□□□ -2.08
LINC00517-202ENST00000554257 KRTAP6-1Q3LI64 71 aa2.06□□□□□ -2.08
LINC00517-202ENST00000554257 KRTAP20-2Q3LI61 65 aa1.99□□□□□ -2.09
LINC00517-202ENST00000554257 KRTAP5-2Q701N4 177 aa1.99□□□□□ -2.09
LINC00517-202ENST00000554257 MT4P47944 62 aa1.97□□□□□ -2.09
LINC00517-202ENST00000554257 SYNE1Q8NF91 8797 aaKnown RBP1.95□□□□□ -2.1
LINC00517-202ENST00000554257 GPR98Q8WXG9 6306 aa1.95□□□□□ -2.1
LINC00517-202ENST00000554257 KRTAP12-4P60329 112 aa1.91□□□□□ -2.1
LINC00517-202ENST00000554257 AHNAK2Q8IVF2 5795 aa1.9□□□□□ -2.11
LINC00517-202ENST00000554257 KRTAP6-2Q3LI66 62 aa1.89□□□□□ -2.11
LINC00517-202ENST00000554257 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
LINC00517-202ENST00000554257 KRTAP5-10Q6L8G5 202 aa1.83□□□□□ -2.12
LINC00517-202ENST00000554257 MT3P25713 68 aa1.81□□□□□ -2.12
LINC00517-202ENST00000554257 KRTAP5-11Q6L8G4 156 aa1.81□□□□□ -2.12
LINC00517-202ENST00000554257 LUZP6Q538Z0 58 aa1.77□□□□□ -2.13
LINC00517-202ENST00000554257 KRTAP5-8O75690 187 aa1.74□□□□□ -2.13
LINC00517-202ENST00000554257 NDUFAF8A1L188 74 aa1.73□□□□□ -2.13
LINC00517-202ENST00000554257 KRTAP5-1Q6L8H4 278 aa1.72□□□□□ -2.13
LINC00517-202ENST00000554257 KRTAP4-4Q9BYR3 166 aa1.72□□□□□ -2.13
LINC00517-202ENST00000554257 INE1O15225 51 aa1.71□□□□□ -2.14
LINC00517-202ENST00000554257 KRTAP5-7Q6L8G8 165 aa1.71□□□□□ -2.14
LINC00517-202ENST00000554257 H3BS24 57 aa1.69□□□□□ -2.14
LINC00517-202ENST00000554257 LCE1EQ5T753 118 aa1.68□□□□□ -2.14
LINC00517-202ENST00000554257 LCE3DQ9BYE3 92 aa1.64□□□□□ -2.15
LINC00517-202ENST00000554257 MUC5ACP98088 5654 aa1.61□□□□□ -2.15
LINC00517-202ENST00000554257 LCE3EQ5T5B0 92 aa1.58□□□□□ -2.16
LINC00517-202ENST00000554257 LCE1CQ5T751 118 aa1.58□□□□□ -2.16
LINC00517-202ENST00000554257 LCE1BQ5T7P3 118 aa1.58□□□□□ -2.16
LINC00517-202ENST00000554257 AHNAKQ09666 5890 aaKnown RBP1.58□□□□□ -2.16
LINC00517-202ENST00000554257 OBSCNQ5VST9 7968 aa1.55□□□□□ -2.16
LINC00517-202ENST00000554257 KRTAP21-2Q3LI59 83 aa1.4□□□□□ -2.19
LINC00517-202ENST00000554257 A0A0A0MQY5 61 aa1.37□□□□□ -2.19
LINC00517-202ENST00000554257 PRM1P04553 51 aa1.32□□□□□ -2.2
LINC00517-202ENST00000554257 LCE1FQ5T754 118 aa1.29□□□□□ -2.2
LINC00517-202ENST00000554257 PHGR1C9JFL3 82 aa1.21□□□□□ -2.22
LINC00517-202ENST00000554257 KRTAP21-1Q3LI58 79 aa1.07□□□□□ -2.24
LINC00517-202ENST00000554257 MUC19Q7Z5P9 8384 aa0.85□□□□□ -2.27
LINC00517-202ENST00000554257 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 120.6 ms