RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 UQCR11O14957 56 aa6.75□□□□□ -1.33
FOXN3-204ENST00000553840 KRTAP4-9Q9BYQ8 210 aa6.74□□□□□ -1.33
FOXN3-204ENST00000553840 A8MU10 97 aa6.72□□□□□ -1.33
FOXN3-204ENST00000553840 KRTAP12-1P59990 96 aa6.7□□□□□ -1.34
FOXN3-204ENST00000553840 CDC42SE1Q9NRR8 79 aa6.67□□□□□ -1.34
FOXN3-204ENST00000553840 MIR22HGQ0VDD5 57 aa6.66□□□□□ -1.34
FOXN3-204ENST00000553840 PRO0628Q9UI54 55 aa6.65□□□□□ -1.34
FOXN3-204ENST00000553840 KRTAP19-7Q3SYF9 63 aa6.62□□□□□ -1.35
FOXN3-204ENST00000553840 MT1EP04732 61 aa6.59□□□□□ -1.35
FOXN3-204ENST00000553840 LCE5AQ5TCM9 118 aa6.58□□□□□ -1.36
FOXN3-204ENST00000553840 KRTAP4-2Q9BYR5 136 aa6.57□□□□□ -1.36
FOXN3-204ENST00000553840 KRTAP19-3Q7Z4W3 81 aa6.56□□□□□ -1.36
FOXN3-204ENST00000553840 K7ERS5 55 aa6.51□□□□□ -1.37
FOXN3-204ENST00000553840 KRTAP4-11Q9BYQ6 195 aa6.5□□□□□ -1.37
FOXN3-204ENST00000553840 KRTAP19-5Q3LI72 72 aa6.47□□□□□ -1.37
FOXN3-204ENST00000553840 MT1GP13640 62 aa6.44□□□□□ -1.38
FOXN3-204ENST00000553840 PP632Q6XCG6 107 aa6.43□□□□□ -1.38
FOXN3-204ENST00000553840 PMAIP1Q13794 54 aa6.42□□□□□ -1.38
FOXN3-204ENST00000553840 TNP1P09430 55 aa6.39□□□□□ -1.39
FOXN3-204ENST00000553840 C10orf95Q9H7T3 257 aa6.39□□□□□ -1.39
FOXN3-204ENST00000553840 DSTQ03001 7570 aaKnown RBP6.34□□□□□ -1.39
FOXN3-204ENST00000553840 LCE3AQ5TA76 89 aa6.3□□□□□ -1.4
FOXN3-204ENST00000553840 MT1MQ8N339 61 aa6.28□□□□□ -1.4
FOXN3-204ENST00000553840 MT1LQ93083 61 aa6.28□□□□□ -1.4
FOXN3-204ENST00000553840 SVIPQ8NHG7 77 aa6.16□□□□□ -1.42
FOXN3-204ENST00000553840 KTN1-AS1Q86SY8 53 aa6.14□□□□□ -1.43
FOXN3-204ENST00000553840 MT4P47944 62 aa6.1□□□□□ -1.43
FOXN3-204ENST00000553840 ROMO1P60602 79 aa6.1□□□□□ -1.43
FOXN3-204ENST00000553840 KRTAP25-1Q3LHN0 102 aa6.1□□□□□ -1.43
FOXN3-204ENST00000553840 KRTAP12-3P60328 96 aa6.09□□□□□ -1.43
FOXN3-204ENST00000553840 KRTAP4-3Q9BYR4 195 aa6.09□□□□□ -1.43
FOXN3-204ENST00000553840 KRTAP5-4Q6L8H1 288 aa6□□□□□ -1.45
FOXN3-204ENST00000553840 GPR98Q8WXG9 6306 aa5.94□□□□□ -1.46
FOXN3-204ENST00000553840 HMCN1Q96RW7 5635 aa5.9□□□□□ -1.47
FOXN3-204ENST00000553840 PRAC1Q96KF2 57 aa5.89□□□□□ -1.47
FOXN3-204ENST00000553840 KRTAP23-1A1A580 65 aa5.86□□□□□ -1.47
FOXN3-204ENST00000553840 KRTAP5-3Q6L8H2 238 aa5.79□□□□□ -1.48
FOXN3-204ENST00000553840 KRTAP5-5Q701N2 237 aaPredicted RBP5.74□□□□□ -1.49
FOXN3-204ENST00000553840 KRTAP5-10Q6L8G5 202 aa5.73□□□□□ -1.49
FOXN3-204ENST00000553840 KRTAP12-4P60329 112 aa5.69□□□□□ -1.5
FOXN3-204ENST00000553840 KRTAP20-2Q3LI61 65 aa5.69□□□□□ -1.5
FOXN3-204ENST00000553840 SPRR5A0A1B0GTR4 108 aa5.68□□□□□ -1.5
FOXN3-204ENST00000553840 KRTAP15-1Q3LI76 137 aa5.67□□□□□ -1.5
FOXN3-204ENST00000553840 AHNAK2Q8IVF2 5795 aa5.67□□□□□ -1.5
FOXN3-204ENST00000553840 LCE3CQ5T5A8 94 aa5.6□□□□□ -1.51
FOXN3-204ENST00000553840 KRTAP5-7Q6L8G8 165 aa5.53□□□□□ -1.52
FOXN3-204ENST00000553840 SYNE1Q8NF91 8797 aaKnown RBP5.43□□□□□ -1.54
FOXN3-204ENST00000553840 MT1AP04731 61 aa5.37□□□□□ -1.55
FOXN3-204ENST00000553840 KRTAP6-1Q3LI64 71 aa5.31□□□□□ -1.56
FOXN3-204ENST00000553840 KRTAP5-2Q701N4 177 aa5.25□□□□□ -1.57
FOXN3-204ENST00000553840 KRTAP9-6A8MVA2 160 aa5.21□□□□□ -1.58
FOXN3-204ENST00000553840 KRTAP6-2Q3LI66 62 aa5.1□□□□□ -1.59
FOXN3-204ENST00000553840 KRTAP5-8O75690 187 aa5.02□□□□□ -1.61
FOXN3-204ENST00000553840 LUZP6Q538Z0 58 aa5.02□□□□□ -1.61
FOXN3-204ENST00000553840 MT3P25713 68 aa4.94□□□□□ -1.62
FOXN3-204ENST00000553840 OBSCNQ5VST9 7968 aa4.8□□□□□ -1.64
FOXN3-204ENST00000553840 NDUFAF8A1L188 74 aa4.78□□□□□ -1.64
FOXN3-204ENST00000553840 KRTAP5-1Q6L8H4 278 aa4.71□□□□□ -1.66
FOXN3-204ENST00000553840 MUC5ACP98088 5654 aa4.69□□□□□ -1.66
FOXN3-204ENST00000553840 MUC5BQ9HC84 5762 aaPredicted RBP4.63□□□□□ -1.67
FOXN3-204ENST00000553840 AHNAKQ09666 5890 aaKnown RBP4.6□□□□□ -1.67
FOXN3-204ENST00000553840 LCE1EQ5T753 118 aa4.54□□□□□ -1.68
FOXN3-204ENST00000553840 A0A0A0MQY5 61 aa4.38□□□□□ -1.71
FOXN3-204ENST00000553840 KRTAP5-11Q6L8G4 156 aa4.38□□□□□ -1.71
FOXN3-204ENST00000553840 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.37□□□□□ -1.71
FOXN3-204ENST00000553840 LCE1BQ5T7P3 118 aa4.28□□□□□ -1.72
FOXN3-204ENST00000553840 LCE1CQ5T751 118 aa4.21□□□□□ -1.74
FOXN3-204ENST00000553840 INE1O15225 51 aa4.05□□□□□ -1.76
FOXN3-204ENST00000553840 LCE3DQ9BYE3 92 aa4.04□□□□□ -1.76
FOXN3-204ENST00000553840 LCE3EQ5T5B0 92 aa3.85□□□□□ -1.79
FOXN3-204ENST00000553840 LCE1FQ5T754 118 aa3.75□□□□□ -1.81
FOXN3-204ENST00000553840 KRTAP4-4Q9BYR3 166 aa3.64□□□□□ -1.83
FOXN3-204ENST00000553840 KRTAP21-2Q3LI59 83 aa3.5□□□□□ -1.85
FOXN3-204ENST00000553840 PHGR1C9JFL3 82 aa3.37□□□□□ -1.87
FOXN3-204ENST00000553840 PRM1P04553 51 aa3.14□□□□□ -1.91
FOXN3-204ENST00000553840 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
FOXN3-204ENST00000553840 KRTAP21-1Q3LI58 79 aa2.57□□□□□ -2
FOXN3-204ENST00000553840 MUC16Q8WXI7 14507 aa2.11□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 16.9 ms