RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 LCE3BQ5TA77 95 aa3.98□□□□□ -1.77
ACTN1-210ENST00000553779 KRTAP10-7P60409 375 aaPredicted RBP3.96□□□□□ -1.78
ACTN1-210ENST00000553779 KRTAP10-12P60413 245 aa3.92□□□□□ -1.78
ACTN1-210ENST00000553779 NDUFAF8A1L188 74 aa3.88□□□□□ -1.79
ACTN1-210ENST00000553779 A0A0D9SG42 100 aa3.87□□□□□ -1.79
ACTN1-210ENST00000553779 KRTAP13-4Q3LI77 160 aa3.87□□□□□ -1.79
ACTN1-210ENST00000553779 CAMK2N1Q7Z7J9 78 aa3.85□□□□□ -1.79
ACTN1-210ENST00000553779 GPR98Q8WXG9 6306 aa3.84□□□□□ -1.79
ACTN1-210ENST00000553779 KRTAP12-1P59990 96 aa3.83□□□□□ -1.8
ACTN1-210ENST00000553779 C10orf95Q9H7T3 257 aa3.79□□□□□ -1.8
ACTN1-210ENST00000553779 PP632Q6XCG6 107 aa3.77□□□□□ -1.81
ACTN1-210ENST00000553779 KRTAP4-12Q9BQ66 201 aa3.74□□□□□ -1.81
ACTN1-210ENST00000553779 KRTAP4-9Q9BYQ8 210 aa3.73□□□□□ -1.81
ACTN1-210ENST00000553779 DSTQ03001 7570 aaKnown RBP3.73□□□□□ -1.81
ACTN1-210ENST00000553779 KRTAP19-3Q7Z4W3 81 aa3.71□□□□□ -1.82
ACTN1-210ENST00000553779 A0A0A0MQY5 61 aa3.7□□□□□ -1.82
ACTN1-210ENST00000553779 LUZP6Q538Z0 58 aa3.7□□□□□ -1.82
ACTN1-210ENST00000553779 LCE5AQ5TCM9 118 aa3.7□□□□□ -1.82
ACTN1-210ENST00000553779 MT1EP04732 61 aa3.69□□□□□ -1.82
ACTN1-210ENST00000553779 KRTAP23-1A1A580 65 aa3.67□□□□□ -1.82
ACTN1-210ENST00000553779 KRTAP19-7Q3SYF9 63 aa3.67□□□□□ -1.82
ACTN1-210ENST00000553779 LCE1DQ5T752 114 aa3.62□□□□□ -1.83
ACTN1-210ENST00000553779 MT4P47944 62 aa3.61□□□□□ -1.83
ACTN1-210ENST00000553779 KRTAP19-5Q3LI72 72 aa3.6□□□□□ -1.83
ACTN1-210ENST00000553779 KRTAP9-9Q9BYP9 154 aa3.6□□□□□ -1.83
ACTN1-210ENST00000553779 KRTAP9-4Q9BYQ2 154 aa3.6□□□□□ -1.83
ACTN1-210ENST00000553779 HMCN1Q96RW7 5635 aa3.6□□□□□ -1.83
ACTN1-210ENST00000553779 MT1GP13640 62 aa3.59□□□□□ -1.83
ACTN1-210ENST00000553779 LCE4AQ5TA78 99 aa3.57□□□□□ -1.84
ACTN1-210ENST00000553779 AHNAK2Q8IVF2 5795 aa3.56□□□□□ -1.84
ACTN1-210ENST00000553779 MT1MQ8N339 61 aa3.53□□□□□ -1.84
ACTN1-210ENST00000553779 MT1LQ93083 61 aa3.5□□□□□ -1.85
ACTN1-210ENST00000553779 SPRR5A0A1B0GTR4 108 aa3.48□□□□□ -1.85
ACTN1-210ENST00000553779 TNP1P09430 55 aa3.47□□□□□ -1.85
ACTN1-210ENST00000553779 KRTAP19-4Q3LI73 84 aa3.46□□□□□ -1.86
ACTN1-210ENST00000553779 LCE3AQ5TA76 89 aa3.45□□□□□ -1.86
ACTN1-210ENST00000553779 KRTAP4-3Q9BYR4 195 aa3.45□□□□□ -1.86
ACTN1-210ENST00000553779 KRTAP5-10Q6L8G5 202 aa3.4□□□□□ -1.87
ACTN1-210ENST00000553779 KRTAP5-4Q6L8H1 288 aa3.4□□□□□ -1.87
ACTN1-210ENST00000553779 INE1O15225 51 aa3.39□□□□□ -1.87
ACTN1-210ENST00000553779 KRTAP4-7Q9BYR0 210 aa3.39□□□□□ -1.87
ACTN1-210ENST00000553779 KRTAP12-3P60328 96 aa3.32□□□□□ -1.88
ACTN1-210ENST00000553779 KRTAP5-7Q6L8G8 165 aa3.31□□□□□ -1.88
ACTN1-210ENST00000553779 KRTAP5-3Q6L8H2 238 aa3.3□□□□□ -1.88
ACTN1-210ENST00000553779 KRTAP12-4P60329 112 aa3.27□□□□□ -1.89
ACTN1-210ENST00000553779 KRTAP20-2Q3LI61 65 aa3.27□□□□□ -1.89
ACTN1-210ENST00000553779 KRTAP4-2Q9BYR5 136 aa3.25□□□□□ -1.89
ACTN1-210ENST00000553779 KRTAP4-11Q9BYQ6 195 aa3.24□□□□□ -1.89
ACTN1-210ENST00000553779 KRTAP5-5Q701N2 237 aaPredicted RBP3.19□□□□□ -1.9
ACTN1-210ENST00000553779 SYNE1Q8NF91 8797 aaKnown RBP3.08□□□□□ -1.92
ACTN1-210ENST00000553779 LCE3CQ5T5A8 94 aa3.03□□□□□ -1.92
ACTN1-210ENST00000553779 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
ACTN1-210ENST00000553779 MT1AP04731 61 aa2.98□□□□□ -1.93
ACTN1-210ENST00000553779 KRTAP6-1Q3LI64 71 aa2.97□□□□□ -1.93
ACTN1-210ENST00000553779 KRTAP5-2Q701N4 177 aa2.95□□□□□ -1.94
ACTN1-210ENST00000553779 MUC5BQ9HC84 5762 aaPredicted RBP2.93□□□□□ -1.94
ACTN1-210ENST00000553779 MUC5ACP98088 5654 aa2.93□□□□□ -1.94
ACTN1-210ENST00000553779 KRTAP5-8O75690 187 aa2.91□□□□□ -1.94
ACTN1-210ENST00000553779 KRTAP6-2Q3LI66 62 aa2.89□□□□□ -1.95
ACTN1-210ENST00000553779 KRTAP9-6A8MVA2 160 aa2.79□□□□□ -1.96
ACTN1-210ENST00000553779 OBSCNQ5VST9 7968 aa2.79□□□□□ -1.96
ACTN1-210ENST00000553779 MT3P25713 68 aa2.76□□□□□ -1.97
ACTN1-210ENST00000553779 KRTAP5-1Q6L8H4 278 aa2.67□□□□□ -1.98
ACTN1-210ENST00000553779 LCE1EQ5T753 118 aa2.52□□□□□ -2.01
ACTN1-210ENST00000553779 LCE1BQ5T7P3 118 aa2.48□□□□□ -2.01
ACTN1-210ENST00000553779 LCE1CQ5T751 118 aa2.34□□□□□ -2.03
ACTN1-210ENST00000553779 LCE3EQ5T5B0 92 aa2.27□□□□□ -2.05
ACTN1-210ENST00000553779 LCE3DQ9BYE3 92 aa2.26□□□□□ -2.05
ACTN1-210ENST00000553779 KRTAP5-11Q6L8G4 156 aa2.19□□□□□ -2.06
ACTN1-210ENST00000553779 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.16□□□□□ -2.06
ACTN1-210ENST00000553779 PRM1P04553 51 aa2.15□□□□□ -2.07
ACTN1-210ENST00000553779 LCE1FQ5T754 118 aa2.13□□□□□ -2.07
ACTN1-210ENST00000553779 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
ACTN1-210ENST00000553779 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
ACTN1-210ENST00000553779 KRTAP4-4Q9BYR3 166 aa1.86□□□□□ -2.11
ACTN1-210ENST00000553779 MUC19Q7Z5P9 8384 aa1.74□□□□□ -2.13
ACTN1-210ENST00000553779 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
ACTN1-210ENST00000553779 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 129.3 ms