RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 KRTAP10-12P60413 245 aa4.07□□□□□ -1.76
HNRNPC-208ENST00000553753 KRTAP20-1Q3LI63 56 aa4.06□□□□□ -1.76
HNRNPC-208ENST00000553753 SPRR2EP22531 72 aa4.05□□□□□ -1.76
HNRNPC-208ENST00000553753 SPRR2BP35325 72 aa4.05□□□□□ -1.76
HNRNPC-208ENST00000553753 SPRR2AP35326 72 aa4.05□□□□□ -1.76
HNRNPC-208ENST00000553753 CAMK2N1Q7Z7J9 78 aa4.04□□□□□ -1.76
HNRNPC-208ENST00000553753 A0A1B0GU33 70 aa4.02□□□□□ -1.77
HNRNPC-208ENST00000553753 A0A0D9SG42 100 aa4.01□□□□□ -1.77
HNRNPC-208ENST00000553753 LCE1AQ5T7P2 110 aa4.01□□□□□ -1.77
HNRNPC-208ENST00000553753 KRTAP2-3P0C7H8 128 aa3.98□□□□□ -1.77
HNRNPC-208ENST00000553753 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.98□□□□□ -1.77
HNRNPC-208ENST00000553753 KRTAP2-4Q9BYR9 128 aa3.98□□□□□ -1.77
HNRNPC-208ENST00000553753 A0A0A0MQY5 61 aa3.95□□□□□ -1.78
HNRNPC-208ENST00000553753 SPINT4Q6UDR6 99 aa3.95□□□□□ -1.78
HNRNPC-208ENST00000553753 KRTAP12-1P59990 96 aa3.92□□□□□ -1.78
HNRNPC-208ENST00000553753 SPRR2DP22532 72 aa3.91□□□□□ -1.78
HNRNPC-208ENST00000553753 K7ERS5 55 aa3.9□□□□□ -1.79
HNRNPC-208ENST00000553753 KRTAP15-1Q3LI76 137 aa3.89□□□□□ -1.79
HNRNPC-208ENST00000553753 KRTAP2-2Q9BYT5 123 aa3.86□□□□□ -1.79
HNRNPC-208ENST00000553753 KRTAP2-1Q9BYU5 128 aa3.86□□□□□ -1.79
HNRNPC-208ENST00000553753 KRTAP19-7Q3SYF9 63 aa3.83□□□□□ -1.8
HNRNPC-208ENST00000553753 NDUFAF8A1L188 74 aa3.81□□□□□ -1.8
HNRNPC-208ENST00000553753 DSTQ03001 7570 aaKnown RBP3.81□□□□□ -1.8
HNRNPC-208ENST00000553753 MT1EP04732 61 aa3.79□□□□□ -1.8
HNRNPC-208ENST00000553753 KRTAP19-3Q7Z4W3 81 aa3.76□□□□□ -1.81
HNRNPC-208ENST00000553753 GPR98Q8WXG9 6306 aa3.75□□□□□ -1.81
HNRNPC-208ENST00000553753 KRTAP19-5Q3LI72 72 aa3.75□□□□□ -1.81
HNRNPC-208ENST00000553753 C10orf95Q9H7T3 257 aa3.75□□□□□ -1.81
HNRNPC-208ENST00000553753 TNP1P09430 55 aa3.74□□□□□ -1.81
HNRNPC-208ENST00000553753 LUZP6Q538Z0 58 aa3.71□□□□□ -1.82
HNRNPC-208ENST00000553753 MT1GP13640 62 aa3.68□□□□□ -1.82
HNRNPC-208ENST00000553753 LCE3AQ5TA76 89 aa3.68□□□□□ -1.82
HNRNPC-208ENST00000553753 PP632Q6XCG6 107 aa3.66□□□□□ -1.82
HNRNPC-208ENST00000553753 MT1LQ93083 61 aa3.63□□□□□ -1.83
HNRNPC-208ENST00000553753 MT1MQ8N339 61 aa3.61□□□□□ -1.83
HNRNPC-208ENST00000553753 KRTAP12-3P60328 96 aa3.56□□□□□ -1.84
HNRNPC-208ENST00000553753 KRTAP4-3Q9BYR4 195 aa3.52□□□□□ -1.85
HNRNPC-208ENST00000553753 KRTAP5-11Q6L8G4 156 aa3.48□□□□□ -1.85
HNRNPC-208ENST00000553753 MT4P47944 62 aa3.43□□□□□ -1.86
HNRNPC-208ENST00000553753 HMCN1Q96RW7 5635 aa3.42□□□□□ -1.86
HNRNPC-208ENST00000553753 KRTAP23-1A1A580 65 aa3.42□□□□□ -1.86
HNRNPC-208ENST00000553753 KRTAP5-4Q6L8H1 288 aa3.41□□□□□ -1.86
HNRNPC-208ENST00000553753 SPRR5A0A1B0GTR4 108 aa3.32□□□□□ -1.88
HNRNPC-208ENST00000553753 KRTAP5-1Q6L8H4 278 aa3.31□□□□□ -1.88
HNRNPC-208ENST00000553753 KRTAP5-5Q701N2 237 aaPredicted RBP3.3□□□□□ -1.88
HNRNPC-208ENST00000553753 LCE3CQ5T5A8 94 aa3.28□□□□□ -1.88
HNRNPC-208ENST00000553753 INE1O15225 51 aa3.26□□□□□ -1.89
HNRNPC-208ENST00000553753 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
HNRNPC-208ENST00000553753 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
HNRNPC-208ENST00000553753 SYNE1Q8NF91 8797 aaKnown RBP3.23□□□□□ -1.89
HNRNPC-208ENST00000553753 KRTAP12-4P60329 112 aa3.22□□□□□ -1.89
HNRNPC-208ENST00000553753 KRTAP20-2Q3LI61 65 aa3.21□□□□□ -1.9
HNRNPC-208ENST00000553753 KRTAP5-10Q6L8G5 202 aa3.17□□□□□ -1.9
HNRNPC-208ENST00000553753 KRTAP9-6A8MVA2 160 aa3.09□□□□□ -1.91
HNRNPC-208ENST00000553753 MT1AP04731 61 aa3.09□□□□□ -1.91
HNRNPC-208ENST00000553753 KRTAP6-1Q3LI64 71 aa3.07□□□□□ -1.92
HNRNPC-208ENST00000553753 KRTAP5-7Q6L8G8 165 aa3.07□□□□□ -1.92
HNRNPC-208ENST00000553753 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
HNRNPC-208ENST00000553753 KRTAP5-2Q701N4 177 aa3□□□□□ -1.93
HNRNPC-208ENST00000553753 OBSCNQ5VST9 7968 aa2.96□□□□□ -1.94
HNRNPC-208ENST00000553753 KRTAP6-2Q3LI66 62 aa2.93□□□□□ -1.94
HNRNPC-208ENST00000553753 AHNAKQ09666 5890 aaKnown RBP2.91□□□□□ -1.94
HNRNPC-208ENST00000553753 MT3P25713 68 aa2.84□□□□□ -1.96
HNRNPC-208ENST00000553753 MUC5BQ9HC84 5762 aaPredicted RBP2.83□□□□□ -1.96
HNRNPC-208ENST00000553753 KRTAP5-8O75690 187 aa2.82□□□□□ -1.96
HNRNPC-208ENST00000553753 MUC5ACP98088 5654 aa2.66□□□□□ -1.98
HNRNPC-208ENST00000553753 LCE1BQ5T7P3 118 aa2.44□□□□□ -2.02
HNRNPC-208ENST00000553753 LCE1CQ5T751 118 aa2.41□□□□□ -2.02
HNRNPC-208ENST00000553753 LCE3DQ9BYE3 92 aa2.38□□□□□ -2.03
HNRNPC-208ENST00000553753 LCE3EQ5T5B0 92 aa2.24□□□□□ -2.05
HNRNPC-208ENST00000553753 LCE1FQ5T754 118 aa2.18□□□□□ -2.06
HNRNPC-208ENST00000553753 PRM1P04553 51 aa2.03□□□□□ -2.08
HNRNPC-208ENST00000553753 KRTAP21-2Q3LI59 83 aa2.03□□□□□ -2.09
HNRNPC-208ENST00000553753 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
HNRNPC-208ENST00000553753 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
HNRNPC-208ENST00000553753 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
HNRNPC-208ENST00000553753 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 8.5 ms