RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 PMCHL2Q9BQD1 86 aa0.79□□□□□ -2.28
SCFD1-210ENST00000553693 hADV29S1A0JD25 119 aa0.78□□□□□ -2.28
SCFD1-210ENST00000553693 IFITM1P13164 125 aa0.78□□□□□ -2.28
SCFD1-210ENST00000553693 PLNP26678 52 aa0.78□□□□□ -2.28
SCFD1-210ENST00000553693 SNHG12Q9BXW3 62 aa0.78□□□□□ -2.28
SCFD1-210ENST00000553693 A0A0D9SG42 100 aa0.77□□□□□ -2.29
SCFD1-210ENST00000553693 MUSTN1Q8IVN3 82 aa0.77□□□□□ -2.29
SCFD1-210ENST00000553693 LINC00472Q9H8W2 130 aa0.77□□□□□ -2.29
SCFD1-210ENST00000553693 UQCR10Q9UDW1 63 aa0.77□□□□□ -2.29
SCFD1-210ENST00000553693 MUC5ACP98088 5654 aa0.76□□□□□ -2.29
SCFD1-210ENST00000553693 C3orf79P0CE67 100 aa0.76□□□□□ -2.29
SCFD1-210ENST00000553693 C10orf95Q9H7T3 257 aa0.76□□□□□ -2.29
SCFD1-210ENST00000553693 MUC5BQ9HC84 5762 aaPredicted RBP0.76□□□□□ -2.29
SCFD1-210ENST00000553693 LEPROTL1O95214 131 aa0.75□□□□□ -2.29
SCFD1-210ENST00000553693 APOC3P02656 99 aa0.75□□□□□ -2.29
SCFD1-210ENST00000553693 KRTDAPP60985 99 aa0.75□□□□□ -2.29
SCFD1-210ENST00000553693 TRBV7-4A0A0J9YYF1 115 aa0.74□□□□□ -2.29
SCFD1-210ENST00000553693 TMEM218A2RU14 115 aa0.74□□□□□ -2.29
SCFD1-210ENST00000553693 C12orf57Q99622 126 aa0.74□□□□□ -2.29
SCFD1-210ENST00000553693 CRIPTQ9P021 101 aa0.74□□□□□ -2.29
SCFD1-210ENST00000553693 S4R3F8 94 aa0.74□□□□□ -2.29
SCFD1-210ENST00000553693 CHKB-CPT1BH3BT56 60 aa0.72□□□□□ -2.29
SCFD1-210ENST00000553693 SYS1-DBNDD2H3BUS1 97 aa0.72□□□□□ -2.29
SCFD1-210ENST00000553693 HSD52Q0P140 79 aa0.72□□□□□ -2.29
SCFD1-210ENST00000553693 KRTAP19-7Q3SYF9 63 aa0.72□□□□□ -2.29
SCFD1-210ENST00000553693 BVES-AS1Q5T3Y7 98 aa0.72□□□□□ -2.29
SCFD1-210ENST00000553693 KRTAP19-3Q7Z4W3 81 aa0.72□□□□□ -2.29
SCFD1-210ENST00000553693 A0A087WVE0 104 aa0.71□□□□□ -2.3
SCFD1-210ENST00000553693 K7EQZ3 153 aa0.71□□□□□ -2.3
SCFD1-210ENST00000553693 UQCR11O14957 56 aa0.71□□□□□ -2.3
SCFD1-210ENST00000553693 NDUFB1O75438 58 aa0.71□□□□□ -2.3
SCFD1-210ENST00000553693 MT1EP04732 61 aa0.71□□□□□ -2.3
SCFD1-210ENST00000553693 MMP24-AS1A0A0U1RRL7 71 aa0.7□□□□□ -2.3
SCFD1-210ENST00000553693 H0YAA0 97 aa0.7□□□□□ -2.3
SCFD1-210ENST00000553693 H0YGX0 51 aa0.7□□□□□ -2.3
SCFD1-210ENST00000553693 KRTAP20-2Q3LI61 65 aa0.7□□□□□ -2.3
SCFD1-210ENST00000553693 MRPL34Q9BQ48 92 aaKnown RBP0.7□□□□□ -2.3
SCFD1-210ENST00000553693 COX6CP09669 75 aa0.69□□□□□ -2.3
SCFD1-210ENST00000553693 MT1GP13640 62 aa0.69□□□□□ -2.3
SCFD1-210ENST00000553693 MT1MQ8N339 61 aa0.68□□□□□ -2.3
SCFD1-210ENST00000553693 C14orf144Q96I85 54 aa0.67□□□□□ -2.3
SCFD1-210ENST00000553693 PRO1854Q9UHT4 67 aa0.67□□□□□ -2.3
SCFD1-210ENST00000553693 M0QZ58 72 aa0.66□□□□□ -2.3
SCFD1-210ENST00000553693 KRTAP19-5Q3LI72 72 aa0.66□□□□□ -2.3
SCFD1-210ENST00000553693 MT1LQ93083 61 aa0.66□□□□□ -2.3
SCFD1-210ENST00000553693 VAMP8Q9BV40 100 aa0.66□□□□□ -2.3
SCFD1-210ENST00000553693 SPCS1Q9Y6A9 102 aa0.66□□□□□ -2.3
SCFD1-210ENST00000553693 LINC01558Q9Y6Z2 57 aa0.66□□□□□ -2.3
SCFD1-210ENST00000553693 NDUFC1O43677 76 aa0.65□□□□□ -2.31
SCFD1-210ENST00000553693 NREPQ16612 68 aa0.65□□□□□ -2.31
SCFD1-210ENST00000553693 K7EP34 96 aa0.64□□□□□ -2.31
SCFD1-210ENST00000553693 M0R143 59 aa0.64□□□□□ -2.31
SCFD1-210ENST00000553693 SYNE1Q8NF91 8797 aaKnown RBP0.63□□□□□ -2.31
SCFD1-210ENST00000553693 TRAV22A0A0B4J277 110 aa0.63□□□□□ -2.31
SCFD1-210ENST00000553693 COX8AP10176 69 aa0.63□□□□□ -2.31
SCFD1-210ENST00000553693 HIGD1BQ9P298 99 aa0.62□□□□□ -2.31
SCFD1-210ENST00000553693 MT-ATP8P03928 68 aa0.61□□□□□ -2.31
SCFD1-210ENST00000553693 ACYP1P07311 99 aa0.6□□□□□ -2.31
SCFD1-210ENST00000553693 COL5A1-AS1Q5SY13 56 aa0.6□□□□□ -2.31
SCFD1-210ENST00000553693 ATOX1O00244 68 aa0.59□□□□□ -2.31
SCFD1-210ENST00000553693 TP53AIP1Q9HCN2 124 aa0.59□□□□□ -2.31
SCFD1-210ENST00000553693 ATXN8Q156A1 80 aa0.58□□□□□ -2.32
SCFD1-210ENST00000553693 KRTAP6-1Q3LI64 71 aa0.57□□□□□ -2.32
SCFD1-210ENST00000553693 KRTAP6-2Q3LI66 62 aa0.57□□□□□ -2.32
SCFD1-210ENST00000553693 H0Y9P7 68 aa0.55□□□□□ -2.32
SCFD1-210ENST00000553693 MT1AP04731 61 aa0.55□□□□□ -2.32
SCFD1-210ENST00000553693 SERP2Q8N6R1 65 aa0.55□□□□□ -2.32
SCFD1-210ENST00000553693 UBL5Q9BZL1 73 aa0.53□□□□□ -2.32
SCFD1-210ENST00000553693 TNP1P09430 55 aa0.51□□□□□ -2.33
SCFD1-210ENST00000553693 ETDBQ3ZM63 59 aa0.5□□□□□ -2.33
SCFD1-210ENST00000553693 PYY3Q5JQD4 70 aa0.5□□□□□ -2.33
SCFD1-210ENST00000553693 A0A1B0GU69 56 aa0.49□□□□□ -2.33
SCFD1-210ENST00000553693 PHGR1C9JFL3 82 aa0.49□□□□□ -2.33
SCFD1-210ENST00000553693 H7BZZ5 65 aa0.48□□□□□ -2.33
SCFD1-210ENST00000553693 ATP5EP2Q5VTU8 51 aa0.43□□□□□ -2.34
SCFD1-210ENST00000553693 KRTAP21-1Q3LI58 79 aa0.42□□□□□ -2.34
SCFD1-210ENST00000553693 LINC00643Q86TS7 51 aa0.41□□□□□ -2.34
SCFD1-210ENST00000553693 PRM1P04553 51 aa0.18□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 100.1 ms