RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 LCE1AQ5T7P2 110 aa6.56□□□□□ -1.36
ACTN1-209ENST00000553659 SPRR2DP22532 72 aa6.46□□□□□ -1.38
ACTN1-209ENST00000553659 KRTAP4-8A0A0G2JLE6 195 aa6.42□□□□□ -1.38
ACTN1-209ENST00000553659 KRTAP4-8Q9BYQ9 185 aa6.42□□□□□ -1.38
ACTN1-209ENST00000553659 LCE3BQ5TA77 95 aa6.32□□□□□ -1.4
ACTN1-209ENST00000553659 KRTAP10-7P60409 375 aaPredicted RBP6.28□□□□□ -1.4
ACTN1-209ENST00000553659 KRTAP10-12P60413 245 aa6.27□□□□□ -1.41
ACTN1-209ENST00000553659 LCE3AQ5TA76 89 aa6.18□□□□□ -1.42
ACTN1-209ENST00000553659 KRTAP15-1Q3LI76 137 aa6.13□□□□□ -1.43
ACTN1-209ENST00000553659 KRTAP12-3P60328 96 aa5.98□□□□□ -1.45
ACTN1-209ENST00000553659 KRTAP4-9Q9BYQ8 210 aa5.96□□□□□ -1.46
ACTN1-209ENST00000553659 LCE5AQ5TCM9 118 aa5.95□□□□□ -1.46
ACTN1-209ENST00000553659 DSTQ03001 7570 aaKnown RBP5.94□□□□□ -1.46
ACTN1-209ENST00000553659 GPR98Q8WXG9 6306 aa5.93□□□□□ -1.46
ACTN1-209ENST00000553659 KRTAP19-7Q3SYF9 63 aa5.9□□□□□ -1.46
ACTN1-209ENST00000553659 KRTAP19-3Q7Z4W3 81 aa5.88□□□□□ -1.47
ACTN1-209ENST00000553659 SPRR5A0A1B0GTR4 108 aa5.86□□□□□ -1.47
ACTN1-209ENST00000553659 LUZP6Q538Z0 58 aa5.86□□□□□ -1.47
ACTN1-209ENST00000553659 MT1EP04732 61 aa5.85□□□□□ -1.47
ACTN1-209ENST00000553659 KRTAP19-5Q3LI72 72 aa5.81□□□□□ -1.48
ACTN1-209ENST00000553659 LCE1DQ5T752 114 aa5.79□□□□□ -1.48
ACTN1-209ENST00000553659 KRTAP19-4Q3LI73 84 aa5.78□□□□□ -1.48
ACTN1-209ENST00000553659 NDUFAF8A1L188 74 aa5.74□□□□□ -1.49
ACTN1-209ENST00000553659 MT1GP13640 62 aa5.73□□□□□ -1.49
ACTN1-209ENST00000553659 LCE4AQ5TA78 99 aa5.7□□□□□ -1.5
ACTN1-209ENST00000553659 MT4P47944 62 aa5.67□□□□□ -1.5
ACTN1-209ENST00000553659 MT1MQ8N339 61 aa5.6□□□□□ -1.51
ACTN1-209ENST00000553659 LCE3CQ5T5A8 94 aa5.59□□□□□ -1.51
ACTN1-209ENST00000553659 HMCN1Q96RW7 5635 aa5.57□□□□□ -1.52
ACTN1-209ENST00000553659 KRTAP5-10Q6L8G5 202 aa5.54□□□□□ -1.52
ACTN1-209ENST00000553659 KRTAP5-4Q6L8H1 288 aa5.54□□□□□ -1.52
ACTN1-209ENST00000553659 MT1LQ93083 61 aa5.54□□□□□ -1.52
ACTN1-209ENST00000553659 AHNAK2Q8IVF2 5795 aa5.49□□□□□ -1.53
ACTN1-209ENST00000553659 KRTAP4-6Q9BYQ5 205 aa5.49□□□□□ -1.53
ACTN1-209ENST00000553659 KRTAP4-3Q9BYR4 195 aa5.48□□□□□ -1.53
ACTN1-209ENST00000553659 H3BS24 57 aa5.39□□□□□ -1.55
ACTN1-209ENST00000553659 KRTAP5-7Q6L8G8 165 aa5.38□□□□□ -1.55
ACTN1-209ENST00000553659 KRTAP5-3Q6L8H2 238 aa5.34□□□□□ -1.55
ACTN1-209ENST00000553659 KRTAP4-7Q9BYR0 210 aa5.26□□□□□ -1.57
ACTN1-209ENST00000553659 A0A0A0MQY5 61 aa5.24□□□□□ -1.57
ACTN1-209ENST00000553659 KRTAP20-2Q3LI61 65 aa5.24□□□□□ -1.57
ACTN1-209ENST00000553659 KRTAP9-6A8MVA2 160 aa5.18□□□□□ -1.58
ACTN1-209ENST00000553659 KRTAP5-5Q701N2 237 aaPredicted RBP5.17□□□□□ -1.58
ACTN1-209ENST00000553659 KRTAP12-4P60329 112 aa5.13□□□□□ -1.59
ACTN1-209ENST00000553659 LOC100996750A0A140TA64 210 aa5□□□□□ -1.61
ACTN1-209ENST00000553659 SYNE1Q8NF91 8797 aaKnown RBP4.91□□□□□ -1.62
ACTN1-209ENST00000553659 INE1O15225 51 aa4.88□□□□□ -1.63
ACTN1-209ENST00000553659 KRTAP4-11Q9BYQ6 195 aa4.87□□□□□ -1.63
ACTN1-209ENST00000553659 KRTAP5-2Q701N4 177 aa4.8□□□□□ -1.64
ACTN1-209ENST00000553659 MT1AP04731 61 aa4.73□□□□□ -1.65
ACTN1-209ENST00000553659 KRTAP5-8O75690 187 aa4.72□□□□□ -1.65
ACTN1-209ENST00000553659 KRTAP6-1Q3LI64 71 aa4.71□□□□□ -1.66
ACTN1-209ENST00000553659 KRTAP9-4Q9BYQ2 154 aa4.61□□□□□ -1.67
ACTN1-209ENST00000553659 MUC5ACP98088 5654 aa4.58□□□□□ -1.68
ACTN1-209ENST00000553659 KRTAP6-2Q3LI66 62 aa4.56□□□□□ -1.68
ACTN1-209ENST00000553659 AHNAKQ09666 5890 aaKnown RBP4.54□□□□□ -1.68
ACTN1-209ENST00000553659 KRTAP9-9Q9BYP9 154 aa4.54□□□□□ -1.68
ACTN1-209ENST00000553659 MUC5BQ9HC84 5762 aaPredicted RBP4.52□□□□□ -1.69
ACTN1-209ENST00000553659 OBSCNQ5VST9 7968 aa4.46□□□□□ -1.69
ACTN1-209ENST00000553659 KRTAP5-1Q6L8H4 278 aa4.36□□□□□ -1.71
ACTN1-209ENST00000553659 MT3P25713 68 aa4.34□□□□□ -1.71
ACTN1-209ENST00000553659 LCE3DQ9BYE3 92 aa4.25□□□□□ -1.73
ACTN1-209ENST00000553659 LCE3EQ5T5B0 92 aa4.18□□□□□ -1.74
ACTN1-209ENST00000553659 LCE1EQ5T753 118 aa4.07□□□□□ -1.76
ACTN1-209ENST00000553659 KRTAP4-2Q9BYR5 136 aa3.86□□□□□ -1.79
ACTN1-209ENST00000553659 LCE1BQ5T7P3 118 aa3.84□□□□□ -1.79
ACTN1-209ENST00000553659 LCE1CQ5T751 118 aa3.77□□□□□ -1.81
ACTN1-209ENST00000553659 PRM1P04553 51 aa3.68□□□□□ -1.82
ACTN1-209ENST00000553659 KRTAP4-12Q9BQ66 201 aa3.61□□□□□ -1.83
ACTN1-209ENST00000553659 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
ACTN1-209ENST00000553659 KRTAP5-11Q6L8G4 156 aa3.44□□□□□ -1.86
ACTN1-209ENST00000553659 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.39□□□□□ -1.87
ACTN1-209ENST00000553659 PHGR1C9JFL3 82 aa3.23□□□□□ -1.89
ACTN1-209ENST00000553659 KRTAP21-2Q3LI59 83 aa3.11□□□□□ -1.91
ACTN1-209ENST00000553659 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
ACTN1-209ENST00000553659 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
ACTN1-209ENST00000553659 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
ACTN1-209ENST00000553659 MUC16Q8WXI7 14507 aa1.99□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 108.6 ms