RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 SMIM2Q9BVW6 85 aa-0.47□□□□□ -2.48
SCFD1-208ENST00000553278 DNAH17Q9UFH2 4485 aa-0.48□□□□□ -2.49
SCFD1-208ENST00000553278 RHPN1-AS1Q9BWJ2 59 aa-0.48□□□□□ -2.49
SCFD1-208ENST00000553278 PCNTO95613 3336 aa-0.49□□□□□ -2.49
SCFD1-208ENST00000553278 FRYLO94915 3013 aa-0.49□□□□□ -2.49
SCFD1-208ENST00000553278 HTN1P15515 57 aa-0.49□□□□□ -2.49
SCFD1-208ENST00000553278 DNAH10Q8IVF4 4471 aa-0.49□□□□□ -2.49
SCFD1-208ENST00000553278 DMDP11532 3685 aa-0.49□□□□□ -2.49
SCFD1-208ENST00000553278 WDFY3Q8IZQ1 3526 aa-0.5□□□□□ -2.49
SCFD1-208ENST00000553278 EP400Q96L91 3159 aa-0.5□□□□□ -2.49
SCFD1-208ENST00000553278 LINC01590Q5TEZ4 76 aa-0.5□□□□□ -2.49
SCFD1-208ENST00000553278 LMO7Q8WWI1 1683 aa-0.5□□□□□ -2.49
SCFD1-208ENST00000553278 VPS13CQ709C8 3753 aa-0.51□□□□□ -2.49
SCFD1-208ENST00000553278 NRXN3Q9Y4C0 1643 aa-0.51□□□□□ -2.49
SCFD1-208ENST00000553278 MUC3AQ02505 3323 aa-0.51□□□□□ -2.49
SCFD1-208ENST00000553278 WDFY4Q6ZS81 3184 aa-0.51□□□□□ -2.49
SCFD1-208ENST00000553278 ABCA5Q8WWZ7 1642 aa-0.52□□□□□ -2.49
SCFD1-208ENST00000553278 A0A096LNI7 61 aa-0.52□□□□□ -2.49
SCFD1-208ENST00000553278 TFF3Q07654 80 aa-0.52□□□□□ -2.49
SCFD1-208ENST00000553278 TOMM7Q9P0U1 55 aa-0.52□□□□□ -2.49
SCFD1-208ENST00000553278 SZT2Q5T011 3432 aa-0.52□□□□□ -2.49
SCFD1-208ENST00000553278 DCHS1Q96JQ0 3298 aa-0.53□□□□□ -2.49
SCFD1-208ENST00000553278 TRPM2O94759 1503 aa-0.54□□□□□ -2.5
SCFD1-208ENST00000553278 CFAP47Q6ZTR5 3102 aa-0.54□□□□□ -2.5
SCFD1-208ENST00000553278 MKI67P46013 3256 aaKnown RBP-0.54□□□□□ -2.5
SCFD1-208ENST00000553278 KRTAP19-2Q3LHN2 52 aa-0.55□□□□□ -2.5
SCFD1-208ENST00000553278 DEFB124Q8NES8 71 aa-0.55□□□□□ -2.5
SCFD1-208ENST00000553278 CLTCL1P53675 1640 aa-0.56□□□□□ -2.5
SCFD1-208ENST00000553278 NDUFA1O15239 70 aa-0.56□□□□□ -2.5
SCFD1-208ENST00000553278 DNAH12Q6ZR08 3092 aa-0.56□□□□□ -2.5
SCFD1-208ENST00000553278 UNC80Q8N2C7 3258 aa-0.57□□□□□ -2.5
SCFD1-208ENST00000553278 NFAT5O94916 1531 aa-0.57□□□□□ -2.5
SCFD1-208ENST00000553278 DDX60Q8IY21 1712 aaKnown RBP-0.57□□□□□ -2.5
SCFD1-208ENST00000553278 LOC400499M0QZD8 3231 aa-0.57□□□□□ -2.5
SCFD1-208ENST00000553278 LINC01556Q5JQF7 62 aa-0.57□□□□□ -2.5
SCFD1-208ENST00000553278 DEFB104AQ8WTQ1 72 aa-0.57□□□□□ -2.5
SCFD1-208ENST00000553278 CMC2Q9NRP2 79 aa-0.57□□□□□ -2.5
SCFD1-208ENST00000553278 DNAH14Q0VDD8 3507 aa-0.57□□□□□ -2.5
SCFD1-208ENST00000553278 ABCC8Q09428 1581 aa-0.57□□□□□ -2.5
SCFD1-208ENST00000553278 USP34Q70CQ2 3546 aa-0.59□□□□□ -2.5
SCFD1-208ENST00000553278 FANCD2Q9BXW9 1451 aa-0.59□□□□□ -2.5
SCFD1-208ENST00000553278 H3BUX3 64 aa-0.59□□□□□ -2.5
SCFD1-208ENST00000553278 CENPFP49454 3210 aa-0.6□□□□□ -2.5
SCFD1-208ENST00000553278 ASPMQ8IZT6 3477 aa-0.6□□□□□ -2.51
SCFD1-208ENST00000553278 VCANP13611 3396 aa-0.6□□□□□ -2.51
SCFD1-208ENST00000553278 DUOX1Q9NRD9 1551 aa-0.61□□□□□ -2.51
SCFD1-208ENST00000553278 CDH23Q9H251 3354 aa-0.61□□□□□ -2.51
SCFD1-208ENST00000553278 IQGAP1P46940 1657 aa-0.61□□□□□ -2.51
SCFD1-208ENST00000553278 RPL39P62891 51 aaKnown RBP-0.61□□□□□ -2.51
SCFD1-208ENST00000553278 TOP2AP11388 1531 aaKnown RBP-0.61□□□□□ -2.51
SCFD1-208ENST00000553278 SAMD9LQ8IVG5 1584 aa-0.62□□□□□ -2.51
SCFD1-208ENST00000553278 BRCA2P51587 3418 aa-0.62□□□□□ -2.51
SCFD1-208ENST00000553278 XIRP2A4UGR9 3374 aa-0.62□□□□□ -2.51
SCFD1-208ENST00000553278 ATP7AQ04656 1500 aa-0.63□□□□□ -2.51
SCFD1-208ENST00000553278 APELAP0DMC3 54 aa-0.63□□□□□ -2.51
SCFD1-208ENST00000553278 RPL39LQ96EH5 51 aaKnown RBP-0.63□□□□□ -2.51
SCFD1-208ENST00000553278 VPS13AQ96RL7 3174 aa-0.63□□□□□ -2.51
SCFD1-208ENST00000553278 A0A096LPF7 62 aa-0.65□□□□□ -2.51
SCFD1-208ENST00000553278 HTN3P15516 51 aa-0.65□□□□□ -2.51
SCFD1-208ENST00000553278 MROH2BQ7Z745 1585 aa-0.66□□□□□ -2.51
SCFD1-208ENST00000553278 PRCDQ00LT1 54 aa-0.66□□□□□ -2.52
SCFD1-208ENST00000553278 SNRPGP15A8MWD9 76 aa-0.67□□□□□ -2.52
SCFD1-208ENST00000553278 K7EIM0 57 aa-0.67□□□□□ -2.52
SCFD1-208ENST00000553278 TMEM167AQ8TBQ9 72 aa-0.67□□□□□ -2.52
SCFD1-208ENST00000553278 ARHGAP5-AS1Q96IT6 56 aa-0.67□□□□□ -2.52
SCFD1-208ENST00000553278 Q9Y3F1 56 aa-0.67□□□□□ -2.52
SCFD1-208ENST00000553278 TOMM5Q8N4H5 51 aa-0.7□□□□□ -2.52
SCFD1-208ENST00000553278 UTRNP46939 3433 aa-0.7□□□□□ -2.52
SCFD1-208ENST00000553278 H3BSH0 61 aa-0.71□□□□□ -2.52
SCFD1-208ENST00000553278 COX14Q96I36 57 aa-0.72□□□□□ -2.52
SCFD1-208ENST00000553278 IQGAP2Q13576 1575 aa-0.73□□□□□ -2.53
SCFD1-208ENST00000553278 SNRPGP62308 76 aaKnown RBP-0.73□□□□□ -2.53
SCFD1-208ENST00000553278 RPL39P5Q59GN2 51 aa-0.76□□□□□ -2.53
SCFD1-208ENST00000553278 GOLGB1Q14789 3259 aaKnown RBP-0.76□□□□□ -2.53
SCFD1-208ENST00000553278 DEFB108AA8MXU0 73 aa-0.77□□□□□ -2.53
SCFD1-208ENST00000553278 DEFB108BQ8NET1 73 aa-0.79□□□□□ -2.54
SCFD1-208ENST00000553278 GCC2Q8IWJ2 1684 aa-0.81□□□□□ -2.54
SCFD1-208ENST00000553278 STATHP02808 62 aa-0.84□□□□□ -2.54
Retrieved 78 of 20,778 RNA–protein pairs in 42.4 ms