RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 LCE1EQ5T753 118 aa2.46□□□□□ -2.02
CCDC65-204ENST00000552188 MT1XP80297 61 aa2.45□□□□□ -2.02
CCDC65-204ENST00000552188 KRTAP5-11Q6L8G4 156 aa2.43□□□□□ -2.02
CCDC65-204ENST00000552188 A8MU10 97 aa2.42□□□□□ -2.02
CCDC65-204ENST00000552188 LCE3CQ5T5A8 94 aa2.41□□□□□ -2.02
CCDC65-204ENST00000552188 KRTAP8-1Q8IUC2 63 aa2.41□□□□□ -2.02
CCDC65-204ENST00000552188 MUC12Q9UKN1 5478 aa2.4□□□□□ -2.02
CCDC65-204ENST00000552188 KMT2DO14686 5537 aa2.4□□□□□ -2.02
CCDC65-204ENST00000552188 KRTAP12-2P59991 146 aa2.4□□□□□ -2.03
CCDC65-204ENST00000552188 SPRR2FQ96RM1 72 aa2.4□□□□□ -2.03
CCDC65-204ENST00000552188 A0A0D9SG42 100 aa2.39□□□□□ -2.03
CCDC65-204ENST00000552188 A0A1B0GU69 56 aa2.39□□□□□ -2.03
CCDC65-204ENST00000552188 KRTAP5-9P26371 169 aa2.39□□□□□ -2.03
CCDC65-204ENST00000552188 KRTAP13-4Q3LI77 160 aa2.39□□□□□ -2.03
CCDC65-204ENST00000552188 SPATA8Q6RVD6 105 aa2.37□□□□□ -2.03
CCDC65-204ENST00000552188 SPRR2EP22531 72 aa2.36□□□□□ -2.03
CCDC65-204ENST00000552188 SPRR2BP35325 72 aa2.36□□□□□ -2.03
CCDC65-204ENST00000552188 SPRR2AP35326 72 aa2.36□□□□□ -2.03
CCDC65-204ENST00000552188 PRR15LQ9BU68 103 aa2.36□□□□□ -2.03
CCDC65-204ENST00000552188 KRTAP20-1Q3LI63 56 aa2.34□□□□□ -2.03
CCDC65-204ENST00000552188 MDN1Q9NU22 5596 aa2.34□□□□□ -2.03
CCDC65-204ENST00000552188 NEBP20929 6669 aa2.33□□□□□ -2.04
CCDC65-204ENST00000552188 KRTAP2-3P0C7H8 128 aa2.3□□□□□ -2.04
CCDC65-204ENST00000552188 KRTAP2-4Q9BYR9 128 aa2.3□□□□□ -2.04
CCDC65-204ENST00000552188 KRTAP12-1P59990 96 aa2.29□□□□□ -2.04
CCDC65-204ENST00000552188 LINC01558Q9Y6Z2 57 aa2.28□□□□□ -2.04
CCDC65-204ENST00000552188 SPRR2DP22532 72 aa2.27□□□□□ -2.05
CCDC65-204ENST00000552188 UQCR11O14957 56 aa2.26□□□□□ -2.05
CCDC65-204ENST00000552188 KRTAP5-4Q6L8H1 288 aa2.26□□□□□ -2.05
CCDC65-204ENST00000552188 KRTAP9-6A8MVA2 160 aa2.25□□□□□ -2.05
CCDC65-204ENST00000552188 TNP1P09430 55 aa2.23□□□□□ -2.05
CCDC65-204ENST00000552188 KRTAP5-1Q6L8H4 278 aa2.23□□□□□ -2.05
CCDC65-204ENST00000552188 KRTAP4-4Q9BYR3 166 aa2.22□□□□□ -2.05
CCDC65-204ENST00000552188 KRTAP2-1Q9BYU5 128 aa2.22□□□□□ -2.05
CCDC65-204ENST00000552188 INE1O15225 51 aa2.21□□□□□ -2.06
CCDC65-204ENST00000552188 LCE3EQ5T5B0 92 aa2.21□□□□□ -2.06
CCDC65-204ENST00000552188 KRTAP19-7Q3SYF9 63 aa2.18□□□□□ -2.06
CCDC65-204ENST00000552188 C10orf95Q9H7T3 257 aa2.18□□□□□ -2.06
CCDC65-204ENST00000552188 MT1EP04732 61 aa2.17□□□□□ -2.06
CCDC65-204ENST00000552188 KRTAP19-5Q3LI72 72 aa2.17□□□□□ -2.06
CCDC65-204ENST00000552188 KRTAP19-3Q7Z4W3 81 aa2.17□□□□□ -2.06
CCDC65-204ENST00000552188 LCE3AQ5TA76 89 aa2.16□□□□□ -2.06
CCDC65-204ENST00000552188 PP632Q6XCG6 107 aa2.15□□□□□ -2.07
CCDC65-204ENST00000552188 MT1GP13640 62 aa2.13□□□□□ -2.07
CCDC65-204ENST00000552188 MT1LQ93083 61 aa2.09□□□□□ -2.07
CCDC65-204ENST00000552188 KRTAP12-3P60328 96 aa2.08□□□□□ -2.08
CCDC65-204ENST00000552188 MT1MQ8N339 61 aa2.08□□□□□ -2.08
CCDC65-204ENST00000552188 DSTQ03001 7570 aaKnown RBP2.05□□□□□ -2.08
CCDC65-204ENST00000552188 KRTAP5-2Q701N4 177 aa2.02□□□□□ -2.09
CCDC65-204ENST00000552188 KRTAP4-3Q9BYR4 195 aa2.02□□□□□ -2.09
CCDC65-204ENST00000552188 MT4P47944 62 aa1.99□□□□□ -2.09
CCDC65-204ENST00000552188 SPRR5A0A1B0GTR4 108 aa1.98□□□□□ -2.09
CCDC65-204ENST00000552188 OBSCNQ5VST9 7968 aa1.98□□□□□ -2.09
CCDC65-204ENST00000552188 HMCN1Q96RW7 5635 aa1.9□□□□□ -2.11
CCDC65-204ENST00000552188 KRTAP12-4P60329 112 aa1.88□□□□□ -2.11
CCDC65-204ENST00000552188 KRTAP5-5Q701N2 237 aaPredicted RBP1.86□□□□□ -2.11
CCDC65-204ENST00000552188 GPR98Q8WXG9 6306 aa1.85□□□□□ -2.11
CCDC65-204ENST00000552188 KRTAP20-2Q3LI61 65 aa1.84□□□□□ -2.11
CCDC65-204ENST00000552188 LCE3DQ9BYE3 92 aa1.83□□□□□ -2.12
CCDC65-204ENST00000552188 AHNAK2Q8IVF2 5795 aa1.83□□□□□ -2.12
CCDC65-204ENST00000552188 SYNE1Q8NF91 8797 aaKnown RBP1.81□□□□□ -2.12
CCDC65-204ENST00000552188 MT1AP04731 61 aa1.79□□□□□ -2.12
CCDC65-204ENST00000552188 KRTAP5-10Q6L8G5 202 aa1.78□□□□□ -2.12
CCDC65-204ENST00000552188 KRTAP5-8O75690 187 aa1.77□□□□□ -2.13
CCDC65-204ENST00000552188 KRTAP6-1Q3LI64 71 aa1.77□□□□□ -2.13
CCDC65-204ENST00000552188 KRTAP5-7Q6L8G8 165 aa1.71□□□□□ -2.14
CCDC65-204ENST00000552188 KRTAP6-2Q3LI66 62 aa1.69□□□□□ -2.14
CCDC65-204ENST00000552188 LCE1CQ5T751 118 aa1.64□□□□□ -2.15
CCDC65-204ENST00000552188 LCE1BQ5T7P3 118 aa1.64□□□□□ -2.15
CCDC65-204ENST00000552188 MUC5ACP98088 5654 aa1.5□□□□□ -2.17
CCDC65-204ENST00000552188 AHNAKQ09666 5890 aaKnown RBP1.49□□□□□ -2.17
CCDC65-204ENST00000552188 MUC5BQ9HC84 5762 aaPredicted RBP1.47□□□□□ -2.17
CCDC65-204ENST00000552188 MUC19Q7Z5P9 8384 aa1.37□□□□□ -2.19
CCDC65-204ENST00000552188 KRTAP21-2Q3LI59 83 aa1.17□□□□□ -2.22
CCDC65-204ENST00000552188 PHGR1C9JFL3 82 aa1.08□□□□□ -2.24
CCDC65-204ENST00000552188 PRM1P04553 51 aa1.03□□□□□ -2.24
CCDC65-204ENST00000552188 KRTAP21-1Q3LI58 79 aa0.84□□□□□ -2.27
CCDC65-204ENST00000552188 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 64.4 ms