RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 A8MU10 97 aa2.04□□□□□ -2.08
HOXB3-213ENST00000552000 M0QZ58 72 aa2.04□□□□□ -2.08
HOXB3-213ENST00000552000 K7EP34 96 aa2.03□□□□□ -2.08
HOXB3-213ENST00000552000 KRTAP19-3Q7Z4W3 81 aa2.03□□□□□ -2.08
HOXB3-213ENST00000552000 P0C880 135 aa2.02□□□□□ -2.09
HOXB3-213ENST00000552000 CYP4F30PQ9H0H9 118 aa2.02□□□□□ -2.09
HOXB3-213ENST00000552000 M0R143 59 aa2.01□□□□□ -2.09
HOXB3-213ENST00000552000 GTF2H5Q6ZYL4 71 aa2.01□□□□□ -2.09
HOXB3-213ENST00000552000 CYSTM1Q9H1C7 97 aa2.01□□□□□ -2.09
HOXB3-213ENST00000552000 PRO0461Q9UI25 63 aa2.01□□□□□ -2.09
HOXB3-213ENST00000552000 MT1EP04732 61 aa2□□□□□ -2.09
HOXB3-213ENST00000552000 KRTAP19-7Q3SYF9 63 aa2□□□□□ -2.09
HOXB3-213ENST00000552000 TP53AIP1Q9HCN2 124 aa2□□□□□ -2.09
HOXB3-213ENST00000552000 PYY3Q5JQD4 70 aa1.99□□□□□ -2.09
HOXB3-213ENST00000552000 SERP1Q9Y6X1 66 aa1.99□□□□□ -2.09
HOXB3-213ENST00000552000 C20orf197Q8N268 126 aa1.98□□□□□ -2.09
HOXB3-213ENST00000552000 UQCR10Q9UDW1 63 aa1.97□□□□□ -2.09
HOXB3-213ENST00000552000 TRAV22A0A0B4J277 110 aa1.96□□□□□ -2.1
HOXB3-213ENST00000552000 LOC101927531A0A1B0GV80 90 aa1.96□□□□□ -2.1
HOXB3-213ENST00000552000 ACYP1P07311 99 aa1.96□□□□□ -2.1
HOXB3-213ENST00000552000 AHNAKQ09666 5890 aaKnown RBP1.95□□□□□ -2.1
HOXB3-213ENST00000552000 MT1GP13640 62 aa1.95□□□□□ -2.1
HOXB3-213ENST00000552000 MIR22HGQ0VDD5 57 aa1.95□□□□□ -2.1
HOXB3-213ENST00000552000 COL5A1-AS1Q5SY13 56 aa1.94□□□□□ -2.1
HOXB3-213ENST00000552000 MT-ATP8P03928 68 aa1.93□□□□□ -2.1
HOXB3-213ENST00000552000 Q1T7F1 81 aa1.93□□□□□ -2.1
HOXB3-213ENST00000552000 PP632Q6XCG6 107 aa1.93□□□□□ -2.1
HOXB3-213ENST00000552000 UBL5Q9BZL1 73 aa1.93□□□□□ -2.1
HOXB3-213ENST00000552000 MT1MQ8N339 61 aa1.92□□□□□ -2.1
HOXB3-213ENST00000552000 A0A1W2PPM0 123 aa1.91□□□□□ -2.1
HOXB3-213ENST00000552000 SPCS1Q9Y6A9 102 aa1.91□□□□□ -2.1
HOXB3-213ENST00000552000 MUC5BQ9HC84 5762 aaPredicted RBP1.91□□□□□ -2.1
HOXB3-213ENST00000552000 KRTAP19-5Q3LI72 72 aa1.9□□□□□ -2.11
HOXB3-213ENST00000552000 H0Y9P7 68 aa1.89□□□□□ -2.11
HOXB3-213ENST00000552000 KRTAP20-2Q3LI61 65 aa1.89□□□□□ -2.11
HOXB3-213ENST00000552000 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
HOXB3-213ENST00000552000 COX7CP15954 63 aa1.87□□□□□ -2.11
HOXB3-213ENST00000552000 MT1LQ93083 61 aa1.87□□□□□ -2.11
HOXB3-213ENST00000552000 F8W1H4 67 aa1.86□□□□□ -2.11
HOXB3-213ENST00000552000 ATOX1O00244 68 aa1.86□□□□□ -2.11
HOXB3-213ENST00000552000 MUC5ACP98088 5654 aa1.85□□□□□ -2.11
HOXB3-213ENST00000552000 ATP5EP56381 51 aaPredicted RBP1.85□□□□□ -2.11
HOXB3-213ENST00000552000 SYNE1Q8NF91 8797 aaKnown RBP1.85□□□□□ -2.11
HOXB3-213ENST00000552000 A0A0D9SG42 100 aa1.84□□□□□ -2.11
HOXB3-213ENST00000552000 LINC00208Q96KT6 92 aa1.83□□□□□ -2.12
HOXB3-213ENST00000552000 COA5Q86WW8 74 aa1.81□□□□□ -2.12
HOXB3-213ENST00000552000 DMAC1Q96GE9 116 aa1.81□□□□□ -2.12
HOXB3-213ENST00000552000 CDC42SE1Q9NRR8 79 aa1.81□□□□□ -2.12
HOXB3-213ENST00000552000 KRTAP12-4P60329 112 aa1.8□□□□□ -2.12
HOXB3-213ENST00000552000 SPTSSBQ8NFR3 76 aa1.8□□□□□ -2.12
HOXB3-213ENST00000552000 KRTAP13-4Q3LI77 160 aa1.78□□□□□ -2.12
HOXB3-213ENST00000552000 INE1O15225 51 aa1.75□□□□□ -2.13
HOXB3-213ENST00000552000 ETDBQ3ZM63 59 aa1.75□□□□□ -2.13
HOXB3-213ENST00000552000 C10orf95Q9H7T3 257 aa1.75□□□□□ -2.13
HOXB3-213ENST00000552000 ATP5EP2Q5VTU8 51 aa1.71□□□□□ -2.14
HOXB3-213ENST00000552000 ACYP2P14621 99 aa1.7□□□□□ -2.14
HOXB3-213ENST00000552000 SNURFQ9Y675 71 aa1.69□□□□□ -2.14
HOXB3-213ENST00000552000 CHKB-CPT1BH3BT56 60 aa1.68□□□□□ -2.14
HOXB3-213ENST00000552000 SERP2Q8N6R1 65 aa1.68□□□□□ -2.14
HOXB3-213ENST00000552000 LINC00643Q86TS7 51 aa1.66□□□□□ -2.14
HOXB3-213ENST00000552000 LCE3DQ9BYE3 92 aa1.66□□□□□ -2.14
HOXB3-213ENST00000552000 KRTAP12-3P60328 96 aa1.65□□□□□ -2.15
HOXB3-213ENST00000552000 KRTAP12-1P59990 96 aa1.64□□□□□ -2.15
HOXB3-213ENST00000552000 SPATA8Q6RVD6 105 aa1.64□□□□□ -2.15
HOXB3-213ENST00000552000 H7BZZ5 65 aa1.63□□□□□ -2.15
HOXB3-213ENST00000552000 TNP1P09430 55 aa1.63□□□□□ -2.15
HOXB3-213ENST00000552000 KRTAP6-1Q3LI64 71 aa1.61□□□□□ -2.15
HOXB3-213ENST00000552000 MT1AP04731 61 aa1.58□□□□□ -2.16
HOXB3-213ENST00000552000 KRTAP6-2Q3LI66 62 aa1.58□□□□□ -2.16
HOXB3-213ENST00000552000 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
HOXB3-213ENST00000552000 LINC01558Q9Y6Z2 57 aa1.55□□□□□ -2.16
HOXB3-213ENST00000552000 UQCR11O14957 56 aa1.52□□□□□ -2.17
HOXB3-213ENST00000552000 PRR15LQ9BU68 103 aa1.5□□□□□ -2.17
HOXB3-213ENST00000552000 A0A1B0GU69 56 aa1.41□□□□□ -2.18
HOXB3-213ENST00000552000 PHGR1C9JFL3 82 aa1.25□□□□□ -2.21
HOXB3-213ENST00000552000 KRTAP21-1Q3LI58 79 aa0.94□□□□□ -2.26
HOXB3-213ENST00000552000 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
HOXB3-213ENST00000552000 PRM1P04553 51 aa0.64□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 133.5 ms