RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 LCE5AQ5TCM9 118 aa6.75□□□□□ -1.33
DDX54-209ENST00000551912 ROMO1P60602 79 aa6.73□□□□□ -1.33
DDX54-209ENST00000551912 KRTAP12-3P60328 96 aa6.69□□□□□ -1.34
DDX54-209ENST00000551912 MT1LQ93083 61 aa6.67□□□□□ -1.34
DDX54-209ENST00000551912 KRTAP23-1A1A580 65 aa6.66□□□□□ -1.34
DDX54-209ENST00000551912 MT1GP13640 62 aa6.66□□□□□ -1.34
DDX54-209ENST00000551912 LCE3BQ5TA77 95 aa6.63□□□□□ -1.35
DDX54-209ENST00000551912 PP632Q6XCG6 107 aa6.62□□□□□ -1.35
DDX54-209ENST00000551912 KRTAP2-2Q9BYT5 123 aa6.6□□□□□ -1.35
DDX54-209ENST00000551912 KRTAP2-1Q9BYU5 128 aa6.6□□□□□ -1.35
DDX54-209ENST00000551912 BRK1Q8WUW1 75 aa6.59□□□□□ -1.35
DDX54-209ENST00000551912 MT1MQ8N339 61 aa6.55□□□□□ -1.36
DDX54-209ENST00000551912 DSTQ03001 7570 aaKnown RBP6.45□□□□□ -1.38
DDX54-209ENST00000551912 KRTAP15-1Q3LI76 137 aa6.38□□□□□ -1.39
DDX54-209ENST00000551912 KRTAP4-3Q9BYR4 195 aa6.37□□□□□ -1.39
DDX54-209ENST00000551912 KRTAP4-7Q9BYR0 210 aa6.35□□□□□ -1.39
DDX54-209ENST00000551912 KRTAP19-4Q3LI73 84 aa6.34□□□□□ -1.39
DDX54-209ENST00000551912 PMAIP1Q13794 54 aa6.22□□□□□ -1.41
DDX54-209ENST00000551912 LCE3CQ5T5A8 94 aa6.19□□□□□ -1.42
DDX54-209ENST00000551912 LCE4AQ5TA78 99 aa6.08□□□□□ -1.44
DDX54-209ENST00000551912 KRTAP4-9Q9BYQ8 210 aa6.06□□□□□ -1.44
DDX54-209ENST00000551912 PRO0628Q9UI54 55 aa6.06□□□□□ -1.44
DDX54-209ENST00000551912 KRTAP5-4Q6L8H1 288 aa6.02□□□□□ -1.45
DDX54-209ENST00000551912 LOC100996750A0A140TA64 210 aa6□□□□□ -1.45
DDX54-209ENST00000551912 LCE1DQ5T752 114 aa5.97□□□□□ -1.45
DDX54-209ENST00000551912 KRTAP5-5Q701N2 237 aaPredicted RBP5.97□□□□□ -1.45
DDX54-209ENST00000551912 MT4P47944 62 aa5.96□□□□□ -1.46
DDX54-209ENST00000551912 PRAC1Q96KF2 57 aa5.89□□□□□ -1.47
DDX54-209ENST00000551912 HMCN1Q96RW7 5635 aa5.87□□□□□ -1.47
DDX54-209ENST00000551912 KRTAP4-6Q9BYQ5 205 aa5.82□□□□□ -1.48
DDX54-209ENST00000551912 KRTAP9-6A8MVA2 160 aa5.81□□□□□ -1.48
DDX54-209ENST00000551912 KRTAP12-4P60329 112 aa5.74□□□□□ -1.49
DDX54-209ENST00000551912 KTN1-AS1Q86SY8 53 aa5.72□□□□□ -1.49
DDX54-209ENST00000551912 SPRR5A0A1B0GTR4 108 aa5.68□□□□□ -1.5
DDX54-209ENST00000551912 MT1AP04731 61 aa5.68□□□□□ -1.5
DDX54-209ENST00000551912 KRTAP20-2Q3LI61 65 aa5.67□□□□□ -1.5
DDX54-209ENST00000551912 SYNE1Q8NF91 8797 aaKnown RBP5.66□□□□□ -1.5
DDX54-209ENST00000551912 KRTAP6-1Q3LI64 71 aa5.62□□□□□ -1.51
DDX54-209ENST00000551912 SVIPQ8NHG7 77 aa5.61□□□□□ -1.51
DDX54-209ENST00000551912 GPR98Q8WXG9 6306 aa5.52□□□□□ -1.53
DDX54-209ENST00000551912 AHNAK2Q8IVF2 5795 aa5.5□□□□□ -1.53
DDX54-209ENST00000551912 KRTAP5-3Q6L8H2 238 aa5.48□□□□□ -1.53
DDX54-209ENST00000551912 KRTAP9-4Q9BYQ2 154 aa5.45□□□□□ -1.54
DDX54-209ENST00000551912 KRTAP5-10Q6L8G5 202 aa5.35□□□□□ -1.55
DDX54-209ENST00000551912 KRTAP5-2Q701N4 177 aa5.34□□□□□ -1.55
DDX54-209ENST00000551912 KRTAP6-2Q3LI66 62 aa5.3□□□□□ -1.56
DDX54-209ENST00000551912 MT3P25713 68 aa5.19□□□□□ -1.58
DDX54-209ENST00000551912 KRTAP5-7Q6L8G8 165 aa5.09□□□□□ -1.59
DDX54-209ENST00000551912 KRTAP4-11Q9BYQ6 195 aa5.08□□□□□ -1.6
DDX54-209ENST00000551912 LUZP6Q538Z0 58 aa4.95□□□□□ -1.62
DDX54-209ENST00000551912 OBSCNQ5VST9 7968 aa4.91□□□□□ -1.62
DDX54-209ENST00000551912 KRTAP5-8O75690 187 aa4.9□□□□□ -1.63
DDX54-209ENST00000551912 KRTAP5-1Q6L8H4 278 aa4.72□□□□□ -1.65
DDX54-209ENST00000551912 LCE1EQ5T753 118 aa4.66□□□□□ -1.66
DDX54-209ENST00000551912 KRTAP9-9Q9BYP9 154 aa4.59□□□□□ -1.67
DDX54-209ENST00000551912 MUC5ACP98088 5654 aa4.59□□□□□ -1.68
DDX54-209ENST00000551912 LCE3DQ9BYE3 92 aa4.54□□□□□ -1.68
DDX54-209ENST00000551912 MUC5BQ9HC84 5762 aaPredicted RBP4.46□□□□□ -1.69
DDX54-209ENST00000551912 AHNAKQ09666 5890 aaKnown RBP4.39□□□□□ -1.71
DDX54-209ENST00000551912 LCE1BQ5T7P3 118 aa4.37□□□□□ -1.71
DDX54-209ENST00000551912 KRTAP4-2Q9BYR5 136 aa4.36□□□□□ -1.71
DDX54-209ENST00000551912 LCE3EQ5T5B0 92 aa4.34□□□□□ -1.71
DDX54-209ENST00000551912 LCE1CQ5T751 118 aa4.33□□□□□ -1.72
DDX54-209ENST00000551912 NDUFAF8A1L188 74 aa4.3□□□□□ -1.72
DDX54-209ENST00000551912 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.99□□□□□ -1.77
DDX54-209ENST00000551912 H3BS24 57 aa3.93□□□□□ -1.78
DDX54-209ENST00000551912 KRTAP5-11Q6L8G4 156 aa3.89□□□□□ -1.79
DDX54-209ENST00000551912 KRTAP4-12Q9BQ66 201 aa3.82□□□□□ -1.8
DDX54-209ENST00000551912 LCE1FQ5T754 118 aa3.7□□□□□ -1.82
DDX54-209ENST00000551912 KRTAP21-2Q3LI59 83 aa3.69□□□□□ -1.82
DDX54-209ENST00000551912 A0A0A0MQY5 61 aa3.6□□□□□ -1.83
DDX54-209ENST00000551912 INE1O15225 51 aa3.53□□□□□ -1.84
DDX54-209ENST00000551912 PRM1P04553 51 aa3.46□□□□□ -1.86
DDX54-209ENST00000551912 PHGR1C9JFL3 82 aa3.35□□□□□ -1.87
DDX54-209ENST00000551912 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
DDX54-209ENST00000551912 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
DDX54-209ENST00000551912 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
DDX54-209ENST00000551912 MUC16Q8WXI7 14507 aa2.1□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 98.8 ms