RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 LCE5AQ5TCM9 118 aa3.12□□□□□ -1.91
SMARCD1-210ENST00000551352 KRTAP25-1Q3LHN0 102 aa3.09□□□□□ -1.91
SMARCD1-210ENST00000551352 KRTAP2-3P0C7H8 128 aa3.03□□□□□ -1.92
SMARCD1-210ENST00000551352 MT1XP80297 61 aa3.03□□□□□ -1.92
SMARCD1-210ENST00000551352 KRTAP2-4Q9BYR9 128 aa3.03□□□□□ -1.92
SMARCD1-210ENST00000551352 TNP1P09430 55 aa3.02□□□□□ -1.93
SMARCD1-210ENST00000551352 SPRR2FQ96RM1 72 aa3.01□□□□□ -1.93
SMARCD1-210ENST00000551352 SPRR2EP22531 72 aa2.99□□□□□ -1.93
SMARCD1-210ENST00000551352 SPRR2BP35325 72 aa2.99□□□□□ -1.93
SMARCD1-210ENST00000551352 SPRR2AP35326 72 aa2.99□□□□□ -1.93
SMARCD1-210ENST00000551352 KRTAP19-4Q3LI73 84 aa2.98□□□□□ -1.93
SMARCD1-210ENST00000551352 LCE1AQ5T7P2 110 aa2.98□□□□□ -1.93
SMARCD1-210ENST00000551352 PRO2289Q9P1D8 64 aa2.97□□□□□ -1.93
SMARCD1-210ENST00000551352 PP632Q6XCG6 107 aa2.96□□□□□ -1.94
SMARCD1-210ENST00000551352 KRTAP23-1A1A580 65 aa2.94□□□□□ -1.94
SMARCD1-210ENST00000551352 KRTAP2-2Q9BYT5 123 aa2.93□□□□□ -1.94
SMARCD1-210ENST00000551352 KRTAP2-1Q9BYU5 128 aa2.93□□□□□ -1.94
SMARCD1-210ENST00000551352 KRTAP8-1Q8IUC2 63 aa2.92□□□□□ -1.94
SMARCD1-210ENST00000551352 SPRR2DP22532 72 aa2.9□□□□□ -1.95
SMARCD1-210ENST00000551352 KRTAP10-7P60409 375 aaPredicted RBP2.9□□□□□ -1.95
SMARCD1-210ENST00000551352 LCE3AQ5TA76 89 aa2.89□□□□□ -1.95
SMARCD1-210ENST00000551352 KRTAP10-12P60413 245 aa2.88□□□□□ -1.95
SMARCD1-210ENST00000551352 KRTAP12-3P60328 96 aa2.77□□□□□ -1.97
SMARCD1-210ENST00000551352 KRTAP15-1Q3LI76 137 aa2.75□□□□□ -1.97
SMARCD1-210ENST00000551352 KRTAP19-5Q3LI72 72 aa2.74□□□□□ -1.97
SMARCD1-210ENST00000551352 GPR98Q8WXG9 6306 aa2.72□□□□□ -1.97
SMARCD1-210ENST00000551352 KRTAP19-7Q3SYF9 63 aa2.71□□□□□ -1.98
SMARCD1-210ENST00000551352 DSTQ03001 7570 aaKnown RBP2.7□□□□□ -1.98
SMARCD1-210ENST00000551352 MT1EP04732 61 aa2.67□□□□□ -1.98
SMARCD1-210ENST00000551352 SPRR5A0A1B0GTR4 108 aa2.66□□□□□ -1.98
SMARCD1-210ENST00000551352 KRTAP19-3Q7Z4W3 81 aa2.64□□□□□ -1.99
SMARCD1-210ENST00000551352 HMCN1Q96RW7 5635 aa2.62□□□□□ -1.99
SMARCD1-210ENST00000551352 AHNAK2Q8IVF2 5795 aa2.61□□□□□ -1.99
SMARCD1-210ENST00000551352 MT1LQ93083 61 aa2.6□□□□□ -1.99
SMARCD1-210ENST00000551352 LCE3CQ5T5A8 94 aa2.59□□□□□ -1.99
SMARCD1-210ENST00000551352 H3BS24 57 aa2.58□□□□□ -2
SMARCD1-210ENST00000551352 MT4P47944 62 aa2.56□□□□□ -2
SMARCD1-210ENST00000551352 LUZP6Q538Z0 58 aa2.56□□□□□ -2
SMARCD1-210ENST00000551352 NDUFAF8A1L188 74 aa2.55□□□□□ -2
SMARCD1-210ENST00000551352 MT1MQ8N339 61 aa2.55□□□□□ -2
SMARCD1-210ENST00000551352 KRTAP4-3Q9BYR4 195 aa2.55□□□□□ -2
SMARCD1-210ENST00000551352 MT1GP13640 62 aa2.54□□□□□ -2
SMARCD1-210ENST00000551352 KRTAP5-10Q6L8G5 202 aa2.54□□□□□ -2
SMARCD1-210ENST00000551352 KRTAP5-4Q6L8H1 288 aa2.53□□□□□ -2
SMARCD1-210ENST00000551352 KRTAP9-6A8MVA2 160 aa2.46□□□□□ -2.02
SMARCD1-210ENST00000551352 KRTAP5-7Q6L8G8 165 aa2.43□□□□□ -2.02
SMARCD1-210ENST00000551352 KRTAP20-2Q3LI61 65 aa2.39□□□□□ -2.03
SMARCD1-210ENST00000551352 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.38□□□□□ -2.03
SMARCD1-210ENST00000551352 KRTAP5-5Q701N2 237 aaPredicted RBP2.38□□□□□ -2.03
SMARCD1-210ENST00000551352 SYNE1Q8NF91 8797 aaKnown RBP2.32□□□□□ -2.04
SMARCD1-210ENST00000551352 A0A0A0MQY5 61 aa2.24□□□□□ -2.05
SMARCD1-210ENST00000551352 KRTAP12-4P60329 112 aa2.23□□□□□ -2.05
SMARCD1-210ENST00000551352 KRTAP5-11Q6L8G4 156 aa2.22□□□□□ -2.05
SMARCD1-210ENST00000551352 MT1AP04731 61 aa2.21□□□□□ -2.06
SMARCD1-210ENST00000551352 KRTAP5-2Q701N4 177 aa2.21□□□□□ -2.06
SMARCD1-210ENST00000551352 KRTAP6-1Q3LI64 71 aa2.19□□□□□ -2.06
SMARCD1-210ENST00000551352 KRTAP5-8O75690 187 aa2.17□□□□□ -2.06
SMARCD1-210ENST00000551352 MUC5BQ9HC84 5762 aaPredicted RBP2.15□□□□□ -2.07
SMARCD1-210ENST00000551352 AHNAKQ09666 5890 aaKnown RBP2.14□□□□□ -2.07
SMARCD1-210ENST00000551352 MUC5ACP98088 5654 aa2.13□□□□□ -2.07
SMARCD1-210ENST00000551352 INE1O15225 51 aa2.1□□□□□ -2.07
SMARCD1-210ENST00000551352 KRTAP6-2Q3LI66 62 aa2.07□□□□□ -2.08
SMARCD1-210ENST00000551352 OBSCNQ5VST9 7968 aa2.05□□□□□ -2.08
SMARCD1-210ENST00000551352 KRTAP5-1Q6L8H4 278 aa2.05□□□□□ -2.08
SMARCD1-210ENST00000551352 LCE1EQ5T753 118 aa2.02□□□□□ -2.09
SMARCD1-210ENST00000551352 MT3P25713 68 aa1.99□□□□□ -2.09
SMARCD1-210ENST00000551352 KRTAP4-4Q9BYR3 166 aa1.98□□□□□ -2.09
SMARCD1-210ENST00000551352 LCE3DQ9BYE3 92 aa1.94□□□□□ -2.1
SMARCD1-210ENST00000551352 LCE3EQ5T5B0 92 aa1.9□□□□□ -2.11
SMARCD1-210ENST00000551352 LCE1BQ5T7P3 118 aa1.71□□□□□ -2.14
SMARCD1-210ENST00000551352 PRM1P04553 51 aa1.69□□□□□ -2.14
SMARCD1-210ENST00000551352 LCE1CQ5T751 118 aa1.68□□□□□ -2.14
SMARCD1-210ENST00000551352 LCE1FQ5T754 118 aa1.5□□□□□ -2.17
SMARCD1-210ENST00000551352 PHGR1C9JFL3 82 aa1.44□□□□□ -2.18
SMARCD1-210ENST00000551352 KRTAP21-2Q3LI59 83 aa1.44□□□□□ -2.18
SMARCD1-210ENST00000551352 MUC19Q7Z5P9 8384 aa1.3□□□□□ -2.2
SMARCD1-210ENST00000551352 KRTAP21-1Q3LI58 79 aa1.06□□□□□ -2.24
SMARCD1-210ENST00000551352 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 6.1 ms