RNA–Protein interactions for RNA: ENST00000550831.7

TMEM116-213, Transcript of transmembrane protein 116, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM116, Length 1,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-213ENST00000550831 PP632Q6XCG6 107 aa3.86□□□□□ -1.79
TMEM116-213ENST00000550831 TNP1P09430 55 aa3.84□□□□□ -1.79
TMEM116-213ENST00000550831 KRTAP19-6Q3LI70 58 aa3.79□□□□□ -1.8
TMEM116-213ENST00000550831 KRTAP10-5P60370 271 aa3.78□□□□□ -1.8
TMEM116-213ENST00000550831 MT1XP80297 61 aa3.78□□□□□ -1.8
TMEM116-213ENST00000550831 KRTAP6-3Q3LI67 103 aa3.78□□□□□ -1.8
TMEM116-213ENST00000550831 LUZP6Q538Z0 58 aa3.78□□□□□ -1.8
TMEM116-213ENST00000550831 NEBP20929 6669 aa3.73□□□□□ -1.81
TMEM116-213ENST00000550831 PRO2289Q9P1D8 64 aa3.71□□□□□ -1.82
TMEM116-213ENST00000550831 MUC12Q9UKN1 5478 aa3.64□□□□□ -1.83
TMEM116-213ENST00000550831 KRTAP20-1Q3LI63 56 aa3.63□□□□□ -1.83
TMEM116-213ENST00000550831 LCE3AQ5TA76 89 aa3.63□□□□□ -1.83
TMEM116-213ENST00000550831 KRTAP8-1Q8IUC2 63 aa3.63□□□□□ -1.83
TMEM116-213ENST00000550831 KRTAP10-12P60413 245 aa3.61□□□□□ -1.83
TMEM116-213ENST00000550831 KRTAP10-7P60409 375 aaPredicted RBP3.6□□□□□ -1.83
TMEM116-213ENST00000550831 NDUFAF8A1L188 74 aa3.53□□□□□ -1.84
TMEM116-213ENST00000550831 MDN1Q9NU22 5596 aa3.52□□□□□ -1.85
TMEM116-213ENST00000550831 SPRR5A0A1B0GTR4 108 aa3.51□□□□□ -1.85
TMEM116-213ENST00000550831 KRTAP5-9P26371 169 aa3.51□□□□□ -1.85
TMEM116-213ENST00000550831 KRTAP12-3P60328 96 aa3.5□□□□□ -1.85
TMEM116-213ENST00000550831 KMT2DO14686 5537 aa3.49□□□□□ -1.85
TMEM116-213ENST00000550831 KRTAP2-3P0C7H8 128 aa3.46□□□□□ -1.86
TMEM116-213ENST00000550831 LCE1EQ5T753 118 aa3.46□□□□□ -1.86
TMEM116-213ENST00000550831 KRTAP2-4Q9BYR9 128 aa3.46□□□□□ -1.86
TMEM116-213ENST00000550831 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
TMEM116-213ENST00000550831 KRTAP19-5Q3LI72 72 aa3.41□□□□□ -1.86
TMEM116-213ENST00000550831 KRTAP19-7Q3SYF9 63 aa3.37□□□□□ -1.87
TMEM116-213ENST00000550831 KRTAP5-11Q6L8G4 156 aa3.35□□□□□ -1.87
TMEM116-213ENST00000550831 SPRR2EP22531 72 aa3.34□□□□□ -1.88
TMEM116-213ENST00000550831 SPRR2BP35325 72 aa3.34□□□□□ -1.88
TMEM116-213ENST00000550831 SPRR2AP35326 72 aa3.34□□□□□ -1.88
TMEM116-213ENST00000550831 KRTAP2-1Q9BYU5 128 aa3.34□□□□□ -1.88
TMEM116-213ENST00000550831 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
TMEM116-213ENST00000550831 SPRR2FQ96RM1 72 aa3.32□□□□□ -1.88
TMEM116-213ENST00000550831 MT1EP04732 61 aa3.3□□□□□ -1.88
TMEM116-213ENST00000550831 LCE3CQ5T5A8 94 aa3.29□□□□□ -1.88
TMEM116-213ENST00000550831 MT1LQ93083 61 aa3.26□□□□□ -1.89
TMEM116-213ENST00000550831 GPR98Q8WXG9 6306 aa3.23□□□□□ -1.89
TMEM116-213ENST00000550831 SPRR2DP22532 72 aa3.23□□□□□ -1.89
TMEM116-213ENST00000550831 MT1GP13640 62 aa3.15□□□□□ -1.91
TMEM116-213ENST00000550831 KRTAP19-3Q7Z4W3 81 aa3.15□□□□□ -1.91
TMEM116-213ENST00000550831 DSTQ03001 7570 aaKnown RBP3.11□□□□□ -1.91
TMEM116-213ENST00000550831 KRTAP9-6A8MVA2 160 aa3.1□□□□□ -1.91
TMEM116-213ENST00000550831 MT1MQ8N339 61 aa3.1□□□□□ -1.91
TMEM116-213ENST00000550831 INE1O15225 51 aa2.98□□□□□ -1.93
TMEM116-213ENST00000550831 KRTAP4-3Q9BYR4 195 aa2.98□□□□□ -1.93
TMEM116-213ENST00000550831 LCE3EQ5T5B0 92 aa2.93□□□□□ -1.94
TMEM116-213ENST00000550831 HMCN1Q96RW7 5635 aa2.91□□□□□ -1.94
TMEM116-213ENST00000550831 AHNAK2Q8IVF2 5795 aa2.89□□□□□ -1.95
TMEM116-213ENST00000550831 KRTAP5-1Q6L8H4 278 aa2.87□□□□□ -1.95
TMEM116-213ENST00000550831 KRTAP5-10Q6L8G5 202 aa2.85□□□□□ -1.95
TMEM116-213ENST00000550831 MT4P47944 62 aa2.84□□□□□ -1.96
TMEM116-213ENST00000550831 KRTAP5-5Q701N2 237 aaPredicted RBP2.82□□□□□ -1.96
TMEM116-213ENST00000550831 KRTAP5-4Q6L8H1 288 aa2.79□□□□□ -1.96
TMEM116-213ENST00000550831 MT1AP04731 61 aa2.78□□□□□ -1.96
TMEM116-213ENST00000550831 KRTAP5-7Q6L8G8 165 aa2.78□□□□□ -1.96
TMEM116-213ENST00000550831 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
TMEM116-213ENST00000550831 KRTAP6-1Q3LI64 71 aa2.72□□□□□ -1.97
TMEM116-213ENST00000550831 KRTAP20-2Q3LI61 65 aa2.61□□□□□ -1.99
TMEM116-213ENST00000550831 OBSCNQ5VST9 7968 aa2.54□□□□□ -2
TMEM116-213ENST00000550831 KRTAP12-4P60329 112 aa2.53□□□□□ -2
TMEM116-213ENST00000550831 SYNE1Q8NF91 8797 aaKnown RBP2.53□□□□□ -2.01
TMEM116-213ENST00000550831 LCE3DQ9BYE3 92 aa2.48□□□□□ -2.01
TMEM116-213ENST00000550831 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
TMEM116-213ENST00000550831 KRTAP6-2Q3LI66 62 aa2.47□□□□□ -2.01
TMEM116-213ENST00000550831 MUC5ACP98088 5654 aa2.45□□□□□ -2.02
TMEM116-213ENST00000550831 KRTAP5-2Q701N4 177 aa2.42□□□□□ -2.02
TMEM116-213ENST00000550831 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.03
TMEM116-213ENST00000550831 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
TMEM116-213ENST00000550831 LCE1CQ5T751 118 aa2.29□□□□□ -2.04
TMEM116-213ENST00000550831 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
TMEM116-213ENST00000550831 PRM1P04553 51 aa2.16□□□□□ -2.06
TMEM116-213ENST00000550831 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
TMEM116-213ENST00000550831 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
TMEM116-213ENST00000550831 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
TMEM116-213ENST00000550831 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
TMEM116-213ENST00000550831 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 124 ms