RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 SPRR2DP22532 72 aa5.48□□□□□ -1.53
CACNB3-216ENST00000550391 KRTAP4-8A0A0G2JLE6 195 aa5.46□□□□□ -1.54
CACNB3-216ENST00000550391 LCE1AQ5T7P2 110 aa5.46□□□□□ -1.54
CACNB3-216ENST00000550391 KRTAP4-8Q9BYQ9 185 aa5.46□□□□□ -1.54
CACNB3-216ENST00000550391 KRTAP23-1A1A580 65 aa5.42□□□□□ -1.54
CACNB3-216ENST00000550391 LCE3BQ5TA77 95 aa5.41□□□□□ -1.54
CACNB3-216ENST00000550391 LCE3AQ5TA76 89 aa5.4□□□□□ -1.54
CACNB3-216ENST00000550391 KRTAP8-1Q8IUC2 63 aa5.38□□□□□ -1.55
CACNB3-216ENST00000550391 PP632Q6XCG6 107 aa5.36□□□□□ -1.55
CACNB3-216ENST00000550391 KTN1-AS1Q86SY8 53 aa5.34□□□□□ -1.55
CACNB3-216ENST00000550391 DSTQ03001 7570 aaKnown RBP5.3□□□□□ -1.56
CACNB3-216ENST00000550391 PRAC1Q96KF2 57 aa5.29□□□□□ -1.56
CACNB3-216ENST00000550391 KRTAP19-5Q3LI72 72 aa5.26□□□□□ -1.57
CACNB3-216ENST00000550391 KRTAP19-7Q3SYF9 63 aa5.25□□□□□ -1.57
CACNB3-216ENST00000550391 KRTAP12-3P60328 96 aa5.22□□□□□ -1.57
CACNB3-216ENST00000550391 KRTAP4-9Q9BYQ8 210 aa5.21□□□□□ -1.58
CACNB3-216ENST00000550391 MT1EP04732 61 aa5.17□□□□□ -1.58
CACNB3-216ENST00000550391 KRTAP5-10Q6L8G5 202 aa5.08□□□□□ -1.6
CACNB3-216ENST00000550391 KRTAP15-1Q3LI76 137 aa5.07□□□□□ -1.6
CACNB3-216ENST00000550391 MT1LQ93083 61 aa5.04□□□□□ -1.6
CACNB3-216ENST00000550391 KRTAP5-7Q6L8G8 165 aa5.02□□□□□ -1.61
CACNB3-216ENST00000550391 KRTAP19-3Q7Z4W3 81 aa5.02□□□□□ -1.61
CACNB3-216ENST00000550391 AHNAK2Q8IVF2 5795 aa5.01□□□□□ -1.61
CACNB3-216ENST00000550391 LCE1DQ5T752 114 aa5.01□□□□□ -1.61
CACNB3-216ENST00000550391 HMCN1Q96RW7 5635 aa5□□□□□ -1.61
CACNB3-216ENST00000550391 LCE5AQ5TCM9 118 aa4.97□□□□□ -1.61
CACNB3-216ENST00000550391 MT1GP13640 62 aa4.96□□□□□ -1.62
CACNB3-216ENST00000550391 KRTAP19-4Q3LI73 84 aa4.96□□□□□ -1.62
CACNB3-216ENST00000550391 SPRR5A0A1B0GTR4 108 aa4.91□□□□□ -1.62
CACNB3-216ENST00000550391 MT1MQ8N339 61 aa4.89□□□□□ -1.63
CACNB3-216ENST00000550391 LCE3CQ5T5A8 94 aa4.86□□□□□ -1.63
CACNB3-216ENST00000550391 MT4P47944 62 aa4.84□□□□□ -1.63
CACNB3-216ENST00000550391 LCE4AQ5TA78 99 aa4.83□□□□□ -1.64
CACNB3-216ENST00000550391 KRTAP4-7Q9BYR0 210 aa4.83□□□□□ -1.64
CACNB3-216ENST00000550391 KRTAP5-3Q6L8H2 238 aa4.77□□□□□ -1.65
CACNB3-216ENST00000550391 KRTAP4-3Q9BYR4 195 aa4.77□□□□□ -1.65
CACNB3-216ENST00000550391 LUZP6Q538Z0 58 aa4.66□□□□□ -1.66
CACNB3-216ENST00000550391 KRTAP4-6Q9BYQ5 205 aa4.6□□□□□ -1.67
CACNB3-216ENST00000550391 KRTAP9-6A8MVA2 160 aa4.57□□□□□ -1.68
CACNB3-216ENST00000550391 KRTAP5-4Q6L8H1 288 aa4.56□□□□□ -1.68
CACNB3-216ENST00000550391 LOC100996750A0A140TA64 210 aa4.54□□□□□ -1.68
CACNB3-216ENST00000550391 KRTAP5-5Q701N2 237 aaPredicted RBP4.44□□□□□ -1.7
CACNB3-216ENST00000550391 AHNAKQ09666 5890 aaKnown RBP4.39□□□□□ -1.71
CACNB3-216ENST00000550391 KRTAP20-2Q3LI61 65 aa4.35□□□□□ -1.71
CACNB3-216ENST00000550391 MUC5ACP98088 5654 aa4.32□□□□□ -1.72
CACNB3-216ENST00000550391 MT1AP04731 61 aa4.29□□□□□ -1.72
CACNB3-216ENST00000550391 MUC5BQ9HC84 5762 aaPredicted RBP4.27□□□□□ -1.73
CACNB3-216ENST00000550391 NDUFAF8A1L188 74 aa4.24□□□□□ -1.73
CACNB3-216ENST00000550391 KRTAP6-1Q3LI64 71 aa4.24□□□□□ -1.73
CACNB3-216ENST00000550391 KRTAP12-4P60329 112 aa4.19□□□□□ -1.74
CACNB3-216ENST00000550391 KRTAP4-11Q9BYQ6 195 aa4.19□□□□□ -1.74
CACNB3-216ENST00000550391 SYNE1Q8NF91 8797 aaKnown RBP4.12□□□□□ -1.75
CACNB3-216ENST00000550391 KRTAP5-8O75690 187 aa4.11□□□□□ -1.75
CACNB3-216ENST00000550391 KRTAP9-4Q9BYQ2 154 aa4.1□□□□□ -1.75
CACNB3-216ENST00000550391 KRTAP9-9Q9BYP9 154 aa4.04□□□□□ -1.76
CACNB3-216ENST00000550391 KRTAP6-2Q3LI66 62 aa3.94□□□□□ -1.78
CACNB3-216ENST00000550391 MT3P25713 68 aa3.91□□□□□ -1.78
CACNB3-216ENST00000550391 KRTAP5-2Q701N4 177 aa3.91□□□□□ -1.78
CACNB3-216ENST00000550391 OBSCNQ5VST9 7968 aa3.83□□□□□ -1.8
CACNB3-216ENST00000550391 LCE3DQ9BYE3 92 aa3.62□□□□□ -1.83
CACNB3-216ENST00000550391 INE1O15225 51 aa3.6□□□□□ -1.83
CACNB3-216ENST00000550391 KRTAP5-1Q6L8H4 278 aa3.59□□□□□ -1.83
CACNB3-216ENST00000550391 LCE3EQ5T5B0 92 aa3.5□□□□□ -1.85
CACNB3-216ENST00000550391 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
CACNB3-216ENST00000550391 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
CACNB3-216ENST00000550391 KRTAP4-2Q9BYR5 136 aa3.22□□□□□ -1.89
CACNB3-216ENST00000550391 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
CACNB3-216ENST00000550391 LCE1BQ5T7P3 118 aa3.21□□□□□ -1.9
CACNB3-216ENST00000550391 KRTAP4-12Q9BQ66 201 aa3.02□□□□□ -1.93
CACNB3-216ENST00000550391 PHGR1C9JFL3 82 aa3.01□□□□□ -1.93
CACNB3-216ENST00000550391 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.99□□□□□ -1.93
CACNB3-216ENST00000550391 KRTAP5-11Q6L8G4 156 aa2.95□□□□□ -1.94
CACNB3-216ENST00000550391 PRM1P04553 51 aa2.94□□□□□ -1.94
CACNB3-216ENST00000550391 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
CACNB3-216ENST00000550391 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
CACNB3-216ENST00000550391 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
CACNB3-216ENST00000550391 KRTAP21-1Q3LI58 79 aa2.33□□□□□ -2.04
CACNB3-216ENST00000550391 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 96.5 ms