RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 CSMD2Q7Z408 3487 aa-1.5□□□□□ -2.65
SNRPF-202ENST00000549580 DMXL2Q8TDJ6 3036 aa-1.53□□□□□ -2.66
SNRPF-202ENST00000549580 SMG1Q96Q15 3661 aaKnown RBP-1.56□□□□□ -2.66
SNRPF-202ENST00000549580 KRTAP19-6Q3LI70 58 aa-1.57□□□□□ -2.66
SNRPF-202ENST00000549580 ATP7AQ04656 1500 aa-1.57□□□□□ -2.66
SNRPF-202ENST00000549580 SAMD9LQ8IVG5 1584 aa-1.58□□□□□ -2.66
SNRPF-202ENST00000549580 LINC01590Q5TEZ4 76 aa-1.6□□□□□ -2.67
SNRPF-202ENST00000549580 MT1BP07438 61 aa-1.62□□□□□ -2.67
SNRPF-202ENST00000549580 RPS29P62273 56 aaKnown RBP-1.63□□□□□ -2.67
SNRPF-202ENST00000549580 RPL39P62891 51 aaKnown RBP-1.64□□□□□ -2.67
SNRPF-202ENST00000549580 CEP250Q9BV73 2442 aa-1.67□□□□□ -2.68
SNRPF-202ENST00000549580 DUOX1Q9NRD9 1551 aa-1.68□□□□□ -2.68
SNRPF-202ENST00000549580 CFAP54Q96N23 3096 aa-1.69□□□□□ -2.68
SNRPF-202ENST00000549580 PRUNE2Q8WUY3 3088 aa-1.7□□□□□ -2.68
SNRPF-202ENST00000549580 MYO15AQ9UKN7 3530 aa-1.7□□□□□ -2.68
SNRPF-202ENST00000549580 VPS13CQ709C8 3753 aa-1.71□□□□□ -2.68
SNRPF-202ENST00000549580 ATMQ13315 3056 aa-1.71□□□□□ -2.68
SNRPF-202ENST00000549580 RHPN1-AS1Q9BWJ2 59 aa-1.71□□□□□ -2.68
SNRPF-202ENST00000549580 RPL39LQ96EH5 51 aaKnown RBP-1.76□□□□□ -2.69
SNRPF-202ENST00000549580 TOP2AP11388 1531 aaKnown RBP-1.79□□□□□ -2.7
SNRPF-202ENST00000549580 FREM2Q5SZK8 3169 aa-1.8□□□□□ -2.7
SNRPF-202ENST00000549580 MROH2BQ7Z745 1585 aa-1.81□□□□□ -2.7
SNRPF-202ENST00000549580 FRYLO94915 3013 aa-1.82□□□□□ -2.7
SNRPF-202ENST00000549580 BOD1L1Q8NFC6 3051 aa-1.84□□□□□ -2.7
SNRPF-202ENST00000549580 DEFB133Q30KQ1 61 aa-1.87□□□□□ -2.71
SNRPF-202ENST00000549580 A0A096LNI7 61 aa-1.89□□□□□ -2.71
SNRPF-202ENST00000549580 DMDP11532 3685 aa-1.89□□□□□ -2.71
SNRPF-202ENST00000549580 MT1FP04733 61 aa-1.9□□□□□ -2.71
SNRPF-202ENST00000549580 PCNTO95613 3336 aa-1.91□□□□□ -2.72
SNRPF-202ENST00000549580 HTN1P15515 57 aa-1.94□□□□□ -2.72
SNRPF-202ENST00000549580 CENPEQ02224 2701 aa-1.97□□□□□ -2.73
SNRPF-202ENST00000549580 WDFY3Q8IZQ1 3526 aa-1.98□□□□□ -2.73
SNRPF-202ENST00000549580 CEP350Q5VT06 3117 aa-2□□□□□ -2.73
SNRPF-202ENST00000549580 DEFB104AQ8WTQ1 72 aa-2□□□□□ -2.73
SNRPF-202ENST00000549580 DEFB124Q8NES8 71 aa-2.02□□□□□ -2.73
SNRPF-202ENST00000549580 TTTY10Q9BZA0 68 aa-2.03□□□□□ -2.73
SNRPF-202ENST00000549580 WDFY4Q6ZS81 3184 aa-2.04□□□□□ -2.74
SNRPF-202ENST00000549580 CD52P31358 61 aa-2.05□□□□□ -2.74
SNRPF-202ENST00000549580 SZT2Q5T011 3432 aa-2.06□□□□□ -2.74
SNRPF-202ENST00000549580 DNAH12Q6ZR08 3092 aa-2.1□□□□□ -2.75
SNRPF-202ENST00000549580 SNRPGP62308 76 aaKnown RBP-2.12□□□□□ -2.75
SNRPF-202ENST00000549580 GCC2Q8IWJ2 1684 aa-2.15□□□□□ -2.75
SNRPF-202ENST00000549580 SPEGQ15772 3267 aa-2.16□□□□□ -2.75
SNRPF-202ENST00000549580 MUC3AQ02505 3323 aa-2.17□□□□□ -2.76
SNRPF-202ENST00000549580 H3BUX3 64 aa-2.17□□□□□ -2.76
SNRPF-202ENST00000549580 DCHS1Q96JQ0 3298 aa-2.18□□□□□ -2.76
SNRPF-202ENST00000549580 XIRP2A4UGR9 3374 aa-2.21□□□□□ -2.76
SNRPF-202ENST00000549580 K7EIM0 57 aa-2.21□□□□□ -2.76
SNRPF-202ENST00000549580 MKI67P46013 3256 aaKnown RBP-2.23□□□□□ -2.77
SNRPF-202ENST00000549580 EP400Q96L91 3159 aa-2.26□□□□□ -2.77
SNRPF-202ENST00000549580 ARHGAP5-AS1Q96IT6 56 aa-2.3□□□□□ -2.78
SNRPF-202ENST00000549580 PRCDQ00LT1 54 aa-2.33□□□□□ -2.78
SNRPF-202ENST00000549580 LOC400499M0QZD8 3231 aa-2.34□□□□□ -2.78
SNRPF-202ENST00000549580 LINC01556Q5JQF7 62 aa-2.42□□□□□ -2.8
SNRPF-202ENST00000549580 USP34Q70CQ2 3546 aa-2.43□□□□□ -2.8
SNRPF-202ENST00000549580 UNC80Q8N2C7 3258 aa-2.47□□□□□ -2.81
SNRPF-202ENST00000549580 VCANP13611 3396 aa-2.47□□□□□ -2.81
SNRPF-202ENST00000549580 KRTAP19-2Q3LHN2 52 aa-2.49□□□□□ -2.81
SNRPF-202ENST00000549580 CFAP47Q6ZTR5 3102 aa-2.5□□□□□ -2.81
SNRPF-202ENST00000549580 ASPMQ8IZT6 3477 aa-2.54□□□□□ -2.82
SNRPF-202ENST00000549580 TMEM167AQ8TBQ9 72 aa-2.54□□□□□ -2.82
SNRPF-202ENST00000549580 DNAH14Q0VDD8 3507 aa-2.55□□□□□ -2.82
SNRPF-202ENST00000549580 H3BSH0 61 aa-2.67□□□□□ -2.84
SNRPF-202ENST00000549580 BRCA2P51587 3418 aa-2.67□□□□□ -2.84
SNRPF-202ENST00000549580 A0A096LPF7 62 aa-2.68□□□□□ -2.84
SNRPF-202ENST00000549580 APELAP0DMC3 54 aa-2.68□□□□□ -2.84
SNRPF-202ENST00000549580 RPL39P5Q59GN2 51 aa-2.72□□□□□ -2.84
SNRPF-202ENST00000549580 CENPFP49454 3210 aa-2.76□□□□□ -2.85
SNRPF-202ENST00000549580 DEFB108AA8MXU0 73 aa-2.81□□□□□ -2.86
SNRPF-202ENST00000549580 CDH23Q9H251 3354 aa-2.93□□□□□ -2.88
SNRPF-202ENST00000549580 Q9Y3F1 56 aa-2.97□□□□□ -2.88
SNRPF-202ENST00000549580 HTN3P15516 51 aa-2.99□□□□□ -2.89
SNRPF-202ENST00000549580 VPS13AQ96RL7 3174 aa-2.99□□□□□ -2.89
SNRPF-202ENST00000549580 UTRNP46939 3433 aa-3.12□□□□□ -2.91
SNRPF-202ENST00000549580 GOLGB1Q14789 3259 aaKnown RBP-3.31□□□□□ -2.94
SNRPF-202ENST00000549580 COX14Q96I36 57 aa-3.35□□□□□ -2.95
SNRPF-202ENST00000549580 DEFB108BQ8NET1 73 aa-3.37□□□□□ -2.95
SNRPF-202ENST00000549580 STATHP02808 62 aa-3.86□□□□□ -3.03
Retrieved 78 of 20,778 RNA–protein pairs in 143.3 ms