RNA–Protein interactions for RNA: ENST00000548498.5

SLC48A1-206, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 618 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-206ENST00000548498 CDC42SE1Q9NRR8 79 aa3.91□□□□□ -1.78
SLC48A1-206ENST00000548498 KRTAP10-12P60413 245 aa3.9□□□□□ -1.79
SLC48A1-206ENST00000548498 A6NED7 52 aa3.89□□□□□ -1.79
SLC48A1-206ENST00000548498 LINC01554Q52M75 96 aa3.89□□□□□ -1.79
SLC48A1-206ENST00000548498 A0A1B0GU33 70 aa3.87□□□□□ -1.79
SLC48A1-206ENST00000548498 KRTAP10-7P60409 375 aaPredicted RBP3.87□□□□□ -1.79
SLC48A1-206ENST00000548498 SPATA8Q6RVD6 105 aa3.87□□□□□ -1.79
SLC48A1-206ENST00000548498 PRO0628Q9UI54 55 aa3.85□□□□□ -1.79
SLC48A1-206ENST00000548498 MIR22HGQ0VDD5 57 aa3.84□□□□□ -1.79
SLC48A1-206ENST00000548498 BRK1Q8WUW1 75 aa3.84□□□□□ -1.79
SLC48A1-206ENST00000548498 KRTAP13-4Q3LI77 160 aa3.83□□□□□ -1.8
SLC48A1-206ENST00000548498 KRTAP5-3Q6L8H2 238 aa3.83□□□□□ -1.8
SLC48A1-206ENST00000548498 AHNAK2Q8IVF2 5795 aa3.79□□□□□ -1.8
SLC48A1-206ENST00000548498 HMCN1Q96RW7 5635 aa3.79□□□□□ -1.8
SLC48A1-206ENST00000548498 K7ERS5 55 aa3.75□□□□□ -1.81
SLC48A1-206ENST00000548498 KRTAP5-10Q6L8G5 202 aa3.69□□□□□ -1.82
SLC48A1-206ENST00000548498 CAMK2N1Q7Z7J9 78 aa3.69□□□□□ -1.82
SLC48A1-206ENST00000548498 MT4P47944 62 aa3.68□□□□□ -1.82
SLC48A1-206ENST00000548498 KRTAP19-7Q3SYF9 63 aa3.67□□□□□ -1.82
SLC48A1-206ENST00000548498 A8MU10 97 aa3.66□□□□□ -1.82
SLC48A1-206ENST00000548498 KRTAP12-1P59990 96 aa3.65□□□□□ -1.83
SLC48A1-206ENST00000548498 PMAIP1Q13794 54 aa3.65□□□□□ -1.83
SLC48A1-206ENST00000548498 KRTAP19-3Q7Z4W3 81 aa3.64□□□□□ -1.83
SLC48A1-206ENST00000548498 MT1EP04732 61 aa3.63□□□□□ -1.83
SLC48A1-206ENST00000548498 MT3P25713 68 aa3.63□□□□□ -1.83
SLC48A1-206ENST00000548498 A0A0D9SG42 100 aa3.62□□□□□ -1.83
SLC48A1-206ENST00000548498 PRAC1Q96KF2 57 aa3.6□□□□□ -1.83
SLC48A1-206ENST00000548498 KRTAP5-7Q6L8G8 165 aa3.58□□□□□ -1.84
SLC48A1-206ENST00000548498 KTN1-AS1Q86SY8 53 aa3.58□□□□□ -1.84
SLC48A1-206ENST00000548498 SPINT4Q6UDR6 99 aa3.56□□□□□ -1.84
SLC48A1-206ENST00000548498 ROMO1P60602 79 aa3.54□□□□□ -1.84
SLC48A1-206ENST00000548498 KRTAP19-5Q3LI72 72 aa3.52□□□□□ -1.85
SLC48A1-206ENST00000548498 KRTAP5-4Q6L8H1 288 aa3.52□□□□□ -1.85
SLC48A1-206ENST00000548498 MT1GP13640 62 aa3.51□□□□□ -1.85
SLC48A1-206ENST00000548498 NDUFAF8A1L188 74 aa3.48□□□□□ -1.85
SLC48A1-206ENST00000548498 C10orf95Q9H7T3 257 aa3.48□□□□□ -1.85
SLC48A1-206ENST00000548498 MT1MQ8N339 61 aa3.47□□□□□ -1.85
SLC48A1-206ENST00000548498 MT1LQ93083 61 aa3.46□□□□□ -1.86
SLC48A1-206ENST00000548498 SPRR5A0A1B0GTR4 108 aa3.45□□□□□ -1.86
SLC48A1-206ENST00000548498 TNP1P09430 55 aa3.45□□□□□ -1.86
SLC48A1-206ENST00000548498 KRTAP25-1Q3LHN0 102 aa3.45□□□□□ -1.86
SLC48A1-206ENST00000548498 PP632Q6XCG6 107 aa3.45□□□□□ -1.86
SLC48A1-206ENST00000548498 KRTAP4-3Q9BYR4 195 aa3.44□□□□□ -1.86
SLC48A1-206ENST00000548498 LCE3AQ5TA76 89 aa3.43□□□□□ -1.86
SLC48A1-206ENST00000548498 KRTAP20-2Q3LI61 65 aa3.35□□□□□ -1.87
SLC48A1-206ENST00000548498 KRTAP12-3P60328 96 aa3.32□□□□□ -1.88
SLC48A1-206ENST00000548498 KRTAP5-5Q701N2 237 aaPredicted RBP3.23□□□□□ -1.89
SLC48A1-206ENST00000548498 AHNAKQ09666 5890 aaKnown RBP3.23□□□□□ -1.89
SLC48A1-206ENST00000548498 SYNE1Q8NF91 8797 aaKnown RBP3.19□□□□□ -1.9
SLC48A1-206ENST00000548498 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
SLC48A1-206ENST00000548498 MUC5ACP98088 5654 aa3.19□□□□□ -1.9
SLC48A1-206ENST00000548498 KRTAP12-4P60329 112 aa3.17□□□□□ -1.9
SLC48A1-206ENST00000548498 MUC5BQ9HC84 5762 aaPredicted RBP3.12□□□□□ -1.91
SLC48A1-206ENST00000548498 KRTAP5-8O75690 187 aa3.07□□□□□ -1.92
SLC48A1-206ENST00000548498 LCE3CQ5T5A8 94 aa3.06□□□□□ -1.92
SLC48A1-206ENST00000548498 LCE1EQ5T753 118 aa3.04□□□□□ -1.92
SLC48A1-206ENST00000548498 KRTAP5-2Q701N4 177 aa3.03□□□□□ -1.92
SLC48A1-206ENST00000548498 OBSCNQ5VST9 7968 aa2.99□□□□□ -1.93
SLC48A1-206ENST00000548498 MT1AP04731 61 aa2.95□□□□□ -1.94
SLC48A1-206ENST00000548498 KRTAP9-6A8MVA2 160 aa2.91□□□□□ -1.94
SLC48A1-206ENST00000548498 KRTAP6-1Q3LI64 71 aa2.9□□□□□ -1.95
SLC48A1-206ENST00000548498 KRTAP5-11Q6L8G4 156 aa2.88□□□□□ -1.95
SLC48A1-206ENST00000548498 LUZP6Q538Z0 58 aa2.85□□□□□ -1.95
SLC48A1-206ENST00000548498 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.85□□□□□ -1.95
SLC48A1-206ENST00000548498 KRTAP6-2Q3LI66 62 aa2.83□□□□□ -1.96
SLC48A1-206ENST00000548498 KRTAP5-1Q6L8H4 278 aa2.78□□□□□ -1.96
SLC48A1-206ENST00000548498 LCE3EQ5T5B0 92 aa2.7□□□□□ -1.98
SLC48A1-206ENST00000548498 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
SLC48A1-206ENST00000548498 LCE1BQ5T7P3 118 aa2.4□□□□□ -2.03
SLC48A1-206ENST00000548498 INE1O15225 51 aa2.39□□□□□ -2.03
SLC48A1-206ENST00000548498 LCE1CQ5T751 118 aa2.34□□□□□ -2.03
SLC48A1-206ENST00000548498 LCE3DQ9BYE3 92 aa2.28□□□□□ -2.04
SLC48A1-206ENST00000548498 PHGR1C9JFL3 82 aa2.16□□□□□ -2.06
SLC48A1-206ENST00000548498 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
SLC48A1-206ENST00000548498 MUC19Q7Z5P9 8384 aa1.87□□□□□ -2.11
SLC48A1-206ENST00000548498 PRM1P04553 51 aa1.78□□□□□ -2.12
SLC48A1-206ENST00000548498 KRTAP21-1Q3LI58 79 aa1.62□□□□□ -2.15
SLC48A1-206ENST00000548498 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 21.6 ms