RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 LCE3AQ5TA76 89 aa4.57□□□□□ -1.68
HDAC7-226ENST00000547259 GPR98Q8WXG9 6306 aa4.54□□□□□ -1.68
HDAC7-226ENST00000547259 DSTQ03001 7570 aaKnown RBP4.52□□□□□ -1.69
HDAC7-226ENST00000547259 PRO0628Q9UI54 55 aa4.52□□□□□ -1.69
HDAC7-226ENST00000547259 PMAIP1Q13794 54 aa4.51□□□□□ -1.69
HDAC7-226ENST00000547259 KRTAP19-5Q3LI72 72 aa4.48□□□□□ -1.69
HDAC7-226ENST00000547259 KRTAP23-1A1A580 65 aa4.46□□□□□ -1.7
HDAC7-226ENST00000547259 KRTAP19-7Q3SYF9 63 aa4.46□□□□□ -1.7
HDAC7-226ENST00000547259 LCE5AQ5TCM9 118 aa4.45□□□□□ -1.7
HDAC7-226ENST00000547259 MT1EP04732 61 aa4.42□□□□□ -1.7
HDAC7-226ENST00000547259 PP632Q6XCG6 107 aa4.42□□□□□ -1.7
HDAC7-226ENST00000547259 KRTAP19-3Q7Z4W3 81 aa4.41□□□□□ -1.7
HDAC7-226ENST00000547259 KRTAP4-9Q9BYQ8 210 aa4.41□□□□□ -1.7
HDAC7-226ENST00000547259 KRTAP12-3P60328 96 aa4.39□□□□□ -1.71
HDAC7-226ENST00000547259 MT1GP13640 62 aa4.32□□□□□ -1.72
HDAC7-226ENST00000547259 LCE1DQ5T752 114 aa4.31□□□□□ -1.72
HDAC7-226ENST00000547259 LCE4AQ5TA78 99 aa4.31□□□□□ -1.72
HDAC7-226ENST00000547259 MT1LQ93083 61 aa4.29□□□□□ -1.72
HDAC7-226ENST00000547259 PRAC1Q96KF2 57 aa4.26□□□□□ -1.73
HDAC7-226ENST00000547259 HMCN1Q96RW7 5635 aa4.25□□□□□ -1.73
HDAC7-226ENST00000547259 KTN1-AS1Q86SY8 53 aa4.24□□□□□ -1.73
HDAC7-226ENST00000547259 MT4P47944 62 aa4.22□□□□□ -1.73
HDAC7-226ENST00000547259 KRTAP15-1Q3LI76 137 aa4.22□□□□□ -1.73
HDAC7-226ENST00000547259 MT1MQ8N339 61 aa4.19□□□□□ -1.74
HDAC7-226ENST00000547259 AHNAK2Q8IVF2 5795 aa4.16□□□□□ -1.74
HDAC7-226ENST00000547259 KRTAP19-4Q3LI73 84 aa4.13□□□□□ -1.75
HDAC7-226ENST00000547259 KRTAP5-4Q6L8H1 288 aa4.13□□□□□ -1.75
HDAC7-226ENST00000547259 KRTAP5-10Q6L8G5 202 aa4.12□□□□□ -1.75
HDAC7-226ENST00000547259 KRTAP4-7Q9BYR0 210 aa4.1□□□□□ -1.75
HDAC7-226ENST00000547259 LCE3CQ5T5A8 94 aa4.07□□□□□ -1.76
HDAC7-226ENST00000547259 KRTAP4-3Q9BYR4 195 aa4.07□□□□□ -1.76
HDAC7-226ENST00000547259 SVIPQ8NHG7 77 aa4.05□□□□□ -1.76
HDAC7-226ENST00000547259 KRTAP4-6Q9BYQ5 205 aa4.05□□□□□ -1.76
HDAC7-226ENST00000547259 KRTAP5-7Q6L8G8 165 aa4.03□□□□□ -1.76
HDAC7-226ENST00000547259 KRTAP5-3Q6L8H2 238 aa3.99□□□□□ -1.77
HDAC7-226ENST00000547259 SPRR5A0A1B0GTR4 108 aa3.92□□□□□ -1.78
HDAC7-226ENST00000547259 KRTAP20-2Q3LI61 65 aa3.91□□□□□ -1.78
HDAC7-226ENST00000547259 KRTAP12-4P60329 112 aa3.9□□□□□ -1.79
HDAC7-226ENST00000547259 LOC100996750A0A140TA64 210 aa3.86□□□□□ -1.79
HDAC7-226ENST00000547259 KRTAP5-5Q701N2 237 aaPredicted RBP3.84□□□□□ -1.79
HDAC7-226ENST00000547259 KRTAP9-6A8MVA2 160 aa3.82□□□□□ -1.8
HDAC7-226ENST00000547259 SYNE1Q8NF91 8797 aaKnown RBP3.72□□□□□ -1.81
HDAC7-226ENST00000547259 MT1AP04731 61 aa3.66□□□□□ -1.82
HDAC7-226ENST00000547259 KRTAP4-11Q9BYQ6 195 aa3.65□□□□□ -1.83
HDAC7-226ENST00000547259 KRTAP6-1Q3LI64 71 aa3.61□□□□□ -1.83
HDAC7-226ENST00000547259 KRTAP5-2Q701N4 177 aa3.57□□□□□ -1.84
HDAC7-226ENST00000547259 LUZP6Q538Z0 58 aa3.54□□□□□ -1.84
HDAC7-226ENST00000547259 AHNAKQ09666 5890 aaKnown RBP3.51□□□□□ -1.85
HDAC7-226ENST00000547259 KRTAP5-8O75690 187 aa3.5□□□□□ -1.85
HDAC7-226ENST00000547259 KRTAP9-4Q9BYQ2 154 aa3.49□□□□□ -1.85
HDAC7-226ENST00000547259 MUC5BQ9HC84 5762 aaPredicted RBP3.49□□□□□ -1.85
HDAC7-226ENST00000547259 MUC5ACP98088 5654 aa3.48□□□□□ -1.85
HDAC7-226ENST00000547259 KRTAP9-9Q9BYP9 154 aa3.44□□□□□ -1.86
HDAC7-226ENST00000547259 OBSCNQ5VST9 7968 aa3.42□□□□□ -1.86
HDAC7-226ENST00000547259 KRTAP6-2Q3LI66 62 aa3.39□□□□□ -1.87
HDAC7-226ENST00000547259 MT3P25713 68 aa3.32□□□□□ -1.88
HDAC7-226ENST00000547259 NDUFAF8A1L188 74 aa3.23□□□□□ -1.89
HDAC7-226ENST00000547259 KRTAP5-1Q6L8H4 278 aa3.23□□□□□ -1.89
HDAC7-226ENST00000547259 LCE1EQ5T753 118 aa3.09□□□□□ -1.91
HDAC7-226ENST00000547259 LCE3DQ9BYE3 92 aa3.02□□□□□ -1.93
HDAC7-226ENST00000547259 LCE3EQ5T5B0 92 aa2.9□□□□□ -1.95
HDAC7-226ENST00000547259 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
HDAC7-226ENST00000547259 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
HDAC7-226ENST00000547259 KRTAP4-2Q9BYR5 136 aa2.85□□□□□ -1.95
HDAC7-226ENST00000547259 A0A0A0MQY5 61 aa2.78□□□□□ -1.96
HDAC7-226ENST00000547259 INE1O15225 51 aa2.66□□□□□ -1.98
HDAC7-226ENST00000547259 KRTAP4-12Q9BQ66 201 aa2.66□□□□□ -1.98
HDAC7-226ENST00000547259 LCE1FQ5T754 118 aa2.63□□□□□ -1.99
HDAC7-226ENST00000547259 KRTAP5-11Q6L8G4 156 aa2.59□□□□□ -1.99
HDAC7-226ENST00000547259 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.56□□□□□ -2
HDAC7-226ENST00000547259 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
HDAC7-226ENST00000547259 PRM1P04553 51 aa2.41□□□□□ -2.02
HDAC7-226ENST00000547259 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
HDAC7-226ENST00000547259 H3BS24 57 aa2.32□□□□□ -2.04
HDAC7-226ENST00000547259 KRTAP4-4Q9BYR3 166 aa2.13□□□□□ -2.07
HDAC7-226ENST00000547259 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
HDAC7-226ENST00000547259 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
HDAC7-226ENST00000547259 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 333.4 ms