RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 LCE4AQ5TA78 99 aa3.55□□□□□ -1.84
SSH1-205ENST00000546812 KRTAP5-7Q6L8G8 165 aa3.54□□□□□ -1.84
SSH1-205ENST00000546812 MIR22HGQ0VDD5 57 aa3.53□□□□□ -1.84
SSH1-205ENST00000546812 KRTAP19-3Q7Z4W3 81 aa3.51□□□□□ -1.85
SSH1-205ENST00000546812 A6NED7 52 aa3.49□□□□□ -1.85
SSH1-205ENST00000546812 KRTAP19-7Q3SYF9 63 aa3.46□□□□□ -1.86
SSH1-205ENST00000546812 MT1EP04732 61 aa3.45□□□□□ -1.86
SSH1-205ENST00000546812 KRTAP5-3Q6L8H2 238 aa3.43□□□□□ -1.86
SSH1-205ENST00000546812 KRTAP4-6Q9BYQ5 205 aa3.43□□□□□ -1.86
SSH1-205ENST00000546812 K7ERS5 55 aa3.41□□□□□ -1.86
SSH1-205ENST00000546812 KRTAP5-4Q6L8H1 288 aa3.41□□□□□ -1.86
SSH1-205ENST00000546812 C10orf95Q9H7T3 257 aa3.41□□□□□ -1.86
SSH1-205ENST00000546812 SPRR5A0A1B0GTR4 108 aa3.4□□□□□ -1.87
SSH1-205ENST00000546812 MT1GP13640 62 aa3.39□□□□□ -1.87
SSH1-205ENST00000546812 CDC42SE1Q9NRR8 79 aa3.37□□□□□ -1.87
SSH1-205ENST00000546812 PP632Q6XCG6 107 aa3.36□□□□□ -1.87
SSH1-205ENST00000546812 TNP1P09430 55 aa3.35□□□□□ -1.87
SSH1-205ENST00000546812 MT1MQ8N339 61 aa3.31□□□□□ -1.88
SSH1-205ENST00000546812 LCE3AQ5TA76 89 aa3.3□□□□□ -1.88
SSH1-205ENST00000546812 KRTAP25-1Q3LHN0 102 aa3.26□□□□□ -1.89
SSH1-205ENST00000546812 KRTAP19-5Q3LI72 72 aa3.26□□□□□ -1.89
SSH1-205ENST00000546812 BRK1Q8WUW1 75 aa3.26□□□□□ -1.89
SSH1-205ENST00000546812 KRTAP4-3Q9BYR4 195 aa3.25□□□□□ -1.89
SSH1-205ENST00000546812 ROMO1P60602 79 aa3.24□□□□□ -1.89
SSH1-205ENST00000546812 KRTAP20-2Q3LI61 65 aa3.24□□□□□ -1.89
SSH1-205ENST00000546812 MT1LQ93083 61 aa3.23□□□□□ -1.89
SSH1-205ENST00000546812 AHNAKQ09666 5890 aaKnown RBP3.21□□□□□ -1.9
SSH1-205ENST00000546812 KRTAP12-3P60328 96 aa3.15□□□□□ -1.91
SSH1-205ENST00000546812 MUC5BQ9HC84 5762 aaPredicted RBP3.14□□□□□ -1.91
SSH1-205ENST00000546812 MUC5ACP98088 5654 aa3.13□□□□□ -1.91
SSH1-205ENST00000546812 KRTAP23-1A1A580 65 aa3.12□□□□□ -1.91
SSH1-205ENST00000546812 KRTAP12-4P60329 112 aa3.11□□□□□ -1.91
SSH1-205ENST00000546812 PRO0628Q9UI54 55 aa3.11□□□□□ -1.91
SSH1-205ENST00000546812 KRTAP5-5Q701N2 237 aaPredicted RBP3.09□□□□□ -1.91
SSH1-205ENST00000546812 KRTAP4-11Q9BYQ6 195 aa3.07□□□□□ -1.92
SSH1-205ENST00000546812 KRTAP4-7Q9BYR0 210 aa3.05□□□□□ -1.92
SSH1-205ENST00000546812 PMAIP1Q13794 54 aa3.04□□□□□ -1.92
SSH1-205ENST00000546812 SYNE1Q8NF91 8797 aaKnown RBP3.04□□□□□ -1.92
SSH1-205ENST00000546812 KRTAP15-1Q3LI76 137 aa3□□□□□ -1.93
SSH1-205ENST00000546812 KRTAP5-8O75690 187 aa2.99□□□□□ -1.93
SSH1-205ENST00000546812 PRAC1Q96KF2 57 aa2.93□□□□□ -1.94
SSH1-205ENST00000546812 LCE3CQ5T5A8 94 aa2.92□□□□□ -1.94
SSH1-205ENST00000546812 LOC100996750A0A140TA64 210 aa2.91□□□□□ -1.94
SSH1-205ENST00000546812 KRTAP5-2Q701N4 177 aa2.91□□□□□ -1.94
SSH1-205ENST00000546812 KRTAP19-4Q3LI73 84 aa2.9□□□□□ -1.95
SSH1-205ENST00000546812 KRTAP9-9Q9BYP9 154 aa2.89□□□□□ -1.95
SSH1-205ENST00000546812 KTN1-AS1Q86SY8 53 aa2.88□□□□□ -1.95
SSH1-205ENST00000546812 OBSCNQ5VST9 7968 aa2.84□□□□□ -1.95
SSH1-205ENST00000546812 SVIPQ8NHG7 77 aa2.78□□□□□ -1.96
SSH1-205ENST00000546812 KRTAP9-6A8MVA2 160 aa2.76□□□□□ -1.97
SSH1-205ENST00000546812 KRTAP6-1Q3LI64 71 aa2.75□□□□□ -1.97
SSH1-205ENST00000546812 MT1AP04731 61 aa2.74□□□□□ -1.97
SSH1-205ENST00000546812 KRTAP6-2Q3LI66 62 aa2.71□□□□□ -1.98
SSH1-205ENST00000546812 KRTAP9-4Q9BYQ2 154 aa2.71□□□□□ -1.98
SSH1-205ENST00000546812 KRTAP5-1Q6L8H4 278 aa2.69□□□□□ -1.98
SSH1-205ENST00000546812 MT3P25713 68 aa2.53□□□□□ -2
SSH1-205ENST00000546812 LCE1EQ5T753 118 aa2.43□□□□□ -2.02
SSH1-205ENST00000546812 LUZP6Q538Z0 58 aa2.39□□□□□ -2.03
SSH1-205ENST00000546812 KRTAP4-2Q9BYR5 136 aa2.33□□□□□ -2.04
SSH1-205ENST00000546812 LCE1BQ5T7P3 118 aa2.31□□□□□ -2.04
SSH1-205ENST00000546812 LCE1CQ5T751 118 aa2.26□□□□□ -2.05
SSH1-205ENST00000546812 KRTAP4-12Q9BQ66 201 aa2.26□□□□□ -2.05
SSH1-205ENST00000546812 NDUFAF8A1L188 74 aa2.23□□□□□ -2.05
SSH1-205ENST00000546812 KRTAP5-11Q6L8G4 156 aa2.16□□□□□ -2.06
SSH1-205ENST00000546812 LCE3DQ9BYE3 92 aa2.13□□□□□ -2.07
SSH1-205ENST00000546812 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
SSH1-205ENST00000546812 LCE1FQ5T754 118 aa2.12□□□□□ -2.07
SSH1-205ENST00000546812 LCE3EQ5T5B0 92 aa2.04□□□□□ -2.08
SSH1-205ENST00000546812 KRTAP5-6Q6L8G9 129 aaPredicted RBP2□□□□□ -2.09
SSH1-205ENST00000546812 A0A0A0MQY5 61 aa1.92□□□□□ -2.1
SSH1-205ENST00000546812 H3BS24 57 aa1.89□□□□□ -2.11
SSH1-205ENST00000546812 INE1O15225 51 aa1.83□□□□□ -2.12
SSH1-205ENST00000546812 KRTAP21-2Q3LI59 83 aa1.82□□□□□ -2.12
SSH1-205ENST00000546812 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
SSH1-205ENST00000546812 KRTAP4-4Q9BYR3 166 aa1.73□□□□□ -2.13
SSH1-205ENST00000546812 PRM1P04553 51 aa1.69□□□□□ -2.14
SSH1-205ENST00000546812 KRTAP21-1Q3LI58 79 aa1.62□□□□□ -2.15
SSH1-205ENST00000546812 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 100.5 ms