RNA–Protein interactions for RNA: ENST00000546618.2

SVOP-201, Transcript of SV2 related protein, humanhuman

TSL 4

Gene SVOP, Length 639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-201ENST00000546618 KRTAP19-5Q3LI72 72 aa6.25□□□□□ -1.41
SVOP-201ENST00000546618 KRTAP19-7Q3SYF9 63 aa6.25□□□□□ -1.41
SVOP-201ENST00000546618 LCE1AQ5T7P2 110 aa6.25□□□□□ -1.41
SVOP-201ENST00000546618 KRTAP2-2Q9BYT5 123 aa6.24□□□□□ -1.41
SVOP-201ENST00000546618 KRTAP2-1Q9BYU5 128 aa6.24□□□□□ -1.41
SVOP-201ENST00000546618 MT1EP04732 61 aa6.17□□□□□ -1.42
SVOP-201ENST00000546618 KRTAP12-3P60328 96 aa6.17□□□□□ -1.42
SVOP-201ENST00000546618 SPRR2DP22532 72 aa6.15□□□□□ -1.42
SVOP-201ENST00000546618 KTN1-AS1Q86SY8 53 aa6.06□□□□□ -1.44
SVOP-201ENST00000546618 PRAC1Q96KF2 57 aa6.02□□□□□ -1.45
SVOP-201ENST00000546618 LCE3BQ5TA77 95 aa6.01□□□□□ -1.45
SVOP-201ENST00000546618 KRTAP19-3Q7Z4W3 81 aa6.01□□□□□ -1.45
SVOP-201ENST00000546618 MT1LQ93083 61 aa6□□□□□ -1.45
SVOP-201ENST00000546618 KRTAP15-1Q3LI76 137 aa5.97□□□□□ -1.45
SVOP-201ENST00000546618 GPR98Q8WXG9 6306 aa5.97□□□□□ -1.45
SVOP-201ENST00000546618 MT1GP13640 62 aa5.96□□□□□ -1.46
SVOP-201ENST00000546618 LCE5AQ5TCM9 118 aa5.95□□□□□ -1.46
SVOP-201ENST00000546618 KRTAP19-4Q3LI73 84 aa5.92□□□□□ -1.46
SVOP-201ENST00000546618 DSTQ03001 7570 aaKnown RBP5.86□□□□□ -1.47
SVOP-201ENST00000546618 MT1MQ8N339 61 aa5.83□□□□□ -1.48
SVOP-201ENST00000546618 LCE3CQ5T5A8 94 aa5.74□□□□□ -1.49
SVOP-201ENST00000546618 SVIPQ8NHG7 77 aa5.71□□□□□ -1.5
SVOP-201ENST00000546618 KRTAP4-7Q9BYR0 210 aa5.71□□□□□ -1.5
SVOP-201ENST00000546618 KRTAP4-3Q9BYR4 195 aa5.65□□□□□ -1.5
SVOP-201ENST00000546618 KRTAP4-9Q9BYQ8 210 aa5.63□□□□□ -1.51
SVOP-201ENST00000546618 HMCN1Q96RW7 5635 aa5.55□□□□□ -1.52
SVOP-201ENST00000546618 LCE1DQ5T752 114 aa5.5□□□□□ -1.53
SVOP-201ENST00000546618 AHNAK2Q8IVF2 5795 aa5.46□□□□□ -1.54
SVOP-201ENST00000546618 LCE4AQ5TA78 99 aa5.45□□□□□ -1.54
SVOP-201ENST00000546618 LOC100996750A0A140TA64 210 aa5.38□□□□□ -1.55
SVOP-201ENST00000546618 SPRR5A0A1B0GTR4 108 aa5.38□□□□□ -1.55
SVOP-201ENST00000546618 KRTAP9-6A8MVA2 160 aa5.37□□□□□ -1.55
SVOP-201ENST00000546618 MT4P47944 62 aa5.37□□□□□ -1.55
SVOP-201ENST00000546618 KRTAP5-4Q6L8H1 288 aa5.3□□□□□ -1.56
SVOP-201ENST00000546618 KRTAP5-5Q701N2 237 aaPredicted RBP5.3□□□□□ -1.56
SVOP-201ENST00000546618 KRTAP5-10Q6L8G5 202 aa5.27□□□□□ -1.57
SVOP-201ENST00000546618 KRTAP4-6Q9BYQ5 205 aa5.2□□□□□ -1.58
SVOP-201ENST00000546618 KRTAP5-7Q6L8G8 165 aa5.12□□□□□ -1.59
SVOP-201ENST00000546618 MT1AP04731 61 aa5.11□□□□□ -1.59
SVOP-201ENST00000546618 KRTAP5-3Q6L8H2 238 aa5.08□□□□□ -1.6
SVOP-201ENST00000546618 LUZP6Q538Z0 58 aa5.05□□□□□ -1.6
SVOP-201ENST00000546618 KRTAP12-4P60329 112 aa5.04□□□□□ -1.6
SVOP-201ENST00000546618 KRTAP6-1Q3LI64 71 aa5.03□□□□□ -1.6
SVOP-201ENST00000546618 SYNE1Q8NF91 8797 aaKnown RBP5□□□□□ -1.61
SVOP-201ENST00000546618 KRTAP20-2Q3LI61 65 aa5□□□□□ -1.61
SVOP-201ENST00000546618 KRTAP9-4Q9BYQ2 154 aa4.9□□□□□ -1.63
SVOP-201ENST00000546618 KRTAP6-2Q3LI66 62 aa4.71□□□□□ -1.66
SVOP-201ENST00000546618 KRTAP5-2Q701N4 177 aa4.68□□□□□ -1.66
SVOP-201ENST00000546618 MT3P25713 68 aa4.67□□□□□ -1.66
SVOP-201ENST00000546618 KRTAP4-11Q9BYQ6 195 aa4.64□□□□□ -1.67
SVOP-201ENST00000546618 NDUFAF8A1L188 74 aa4.61□□□□□ -1.67
SVOP-201ENST00000546618 AHNAKQ09666 5890 aaKnown RBP4.6□□□□□ -1.67
SVOP-201ENST00000546618 MUC5BQ9HC84 5762 aaPredicted RBP4.56□□□□□ -1.68
SVOP-201ENST00000546618 MUC5ACP98088 5654 aa4.53□□□□□ -1.68
SVOP-201ENST00000546618 KRTAP5-8O75690 187 aa4.48□□□□□ -1.69
SVOP-201ENST00000546618 OBSCNQ5VST9 7968 aa4.45□□□□□ -1.7
SVOP-201ENST00000546618 KRTAP9-9Q9BYP9 154 aa4.31□□□□□ -1.72
SVOP-201ENST00000546618 LCE3DQ9BYE3 92 aa4.26□□□□□ -1.73
SVOP-201ENST00000546618 LCE1EQ5T753 118 aa4.16□□□□□ -1.74
SVOP-201ENST00000546618 KRTAP5-1Q6L8H4 278 aa4.16□□□□□ -1.74
SVOP-201ENST00000546618 LCE3EQ5T5B0 92 aa4.11□□□□□ -1.75
SVOP-201ENST00000546618 A0A0A0MQY5 61 aa4.01□□□□□ -1.77
SVOP-201ENST00000546618 INE1O15225 51 aa3.86□□□□□ -1.79
SVOP-201ENST00000546618 LCE1CQ5T751 118 aa3.86□□□□□ -1.79
SVOP-201ENST00000546618 LCE1BQ5T7P3 118 aa3.86□□□□□ -1.79
SVOP-201ENST00000546618 KRTAP4-2Q9BYR5 136 aa3.84□□□□□ -1.79
SVOP-201ENST00000546618 H3BS24 57 aa3.66□□□□□ -1.82
SVOP-201ENST00000546618 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
SVOP-201ENST00000546618 KRTAP5-11Q6L8G4 156 aa3.43□□□□□ -1.86
SVOP-201ENST00000546618 PRM1P04553 51 aa3.39□□□□□ -1.87
SVOP-201ENST00000546618 KRTAP4-12Q9BQ66 201 aa3.39□□□□□ -1.87
SVOP-201ENST00000546618 KRTAP21-2Q3LI59 83 aa3.32□□□□□ -1.88
SVOP-201ENST00000546618 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
SVOP-201ENST00000546618 PHGR1C9JFL3 82 aa3.07□□□□□ -1.92
SVOP-201ENST00000546618 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
SVOP-201ENST00000546618 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
SVOP-201ENST00000546618 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
SVOP-201ENST00000546618 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 56.3 ms