RNA–Protein interactions for RNA: ENST00000545459.5

LPCAT3-212, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-212ENST00000545459 SERP1Q9Y6X1 66 aa1.42□□□□□ -2.18
LPCAT3-212ENST00000545459 ATP5EP56381 51 aaPredicted RBP1.41□□□□□ -2.18
LPCAT3-212ENST00000545459 ATP5EP2Q5VTU8 51 aa1.41□□□□□ -2.18
LPCAT3-212ENST00000545459 DMAC1Q96GE9 116 aa1.39□□□□□ -2.19
LPCAT3-212ENST00000545459 COX7CP15954 63 aa1.38□□□□□ -2.19
LPCAT3-212ENST00000545459 GPR98Q8WXG9 6306 aa1.37□□□□□ -2.19
LPCAT3-212ENST00000545459 KRTAP5-4Q6L8H1 288 aa1.37□□□□□ -2.19
LPCAT3-212ENST00000545459 SERP2Q8N6R1 65 aa1.37□□□□□ -2.19
LPCAT3-212ENST00000545459 TRAV7A0A075B6U4 112 aa1.36□□□□□ -2.19
LPCAT3-212ENST00000545459 H3BPC8 53 aa1.36□□□□□ -2.19
LPCAT3-212ENST00000545459 KRTAP19-7Q3SYF9 63 aa1.36□□□□□ -2.19
LPCAT3-212ENST00000545459 KRTAP19-3Q7Z4W3 81 aa1.36□□□□□ -2.19
LPCAT3-212ENST00000545459 SPANXA2-OT1Q8N9U9 137 aa1.36□□□□□ -2.19
LPCAT3-212ENST00000545459 CYSTM1Q9H1C7 97 aa1.36□□□□□ -2.19
LPCAT3-212ENST00000545459 MT1EP04732 61 aa1.35□□□□□ -2.19
LPCAT3-212ENST00000545459 SPINT4Q6UDR6 99 aa1.35□□□□□ -2.19
LPCAT3-212ENST00000545459 SPTSSBQ8NFR3 76 aa1.34□□□□□ -2.19
LPCAT3-212ENST00000545459 ACYP2P14621 99 aa1.33□□□□□ -2.2
LPCAT3-212ENST00000545459 Q1T7F1 81 aa1.33□□□□□ -2.2
LPCAT3-212ENST00000545459 DSTQ03001 7570 aaKnown RBP1.32□□□□□ -2.2
LPCAT3-212ENST00000545459 SPRR5A0A1B0GTR4 108 aa1.32□□□□□ -2.2
LPCAT3-212ENST00000545459 H7BZZ5 65 aa1.32□□□□□ -2.2
LPCAT3-212ENST00000545459 MT1GP13640 62 aa1.32□□□□□ -2.2
LPCAT3-212ENST00000545459 MT4P47944 62 aa1.32□□□□□ -2.2
LPCAT3-212ENST00000545459 KRTAP13-4Q3LI77 160 aa1.32□□□□□ -2.2
LPCAT3-212ENST00000545459 CHKB-CPT1BH3BT56 60 aa1.31□□□□□ -2.2
LPCAT3-212ENST00000545459 ROMO1P60602 79 aa1.31□□□□□ -2.2
LPCAT3-212ENST00000545459 KRTAP19-5Q3LI72 72 aa1.31□□□□□ -2.2
LPCAT3-212ENST00000545459 PP632Q6XCG6 107 aa1.31□□□□□ -2.2
LPCAT3-212ENST00000545459 A0A0D9SG42 100 aa1.3□□□□□ -2.2
LPCAT3-212ENST00000545459 A0A1B0GU33 70 aa1.3□□□□□ -2.2
LPCAT3-212ENST00000545459 LCE3AQ5TA76 89 aa1.3□□□□□ -2.2
LPCAT3-212ENST00000545459 KRTAP5-10Q6L8G5 202 aa1.3□□□□□ -2.2
LPCAT3-212ENST00000545459 MT1MQ8N339 61 aa1.3□□□□□ -2.2
LPCAT3-212ENST00000545459 SNURFQ9Y675 71 aa1.3□□□□□ -2.2
LPCAT3-212ENST00000545459 KRTAP5-1Q6L8H4 278 aa1.29□□□□□ -2.2
LPCAT3-212ENST00000545459 KRTAP4-4Q9BYR3 166 aa1.29□□□□□ -2.2
LPCAT3-212ENST00000545459 HMCN1Q96RW7 5635 aa1.28□□□□□ -2.2
LPCAT3-212ENST00000545459 MT1LQ93083 61 aa1.28□□□□□ -2.2
LPCAT3-212ENST00000545459 KRTAP4-3Q9BYR4 195 aa1.27□□□□□ -2.21
LPCAT3-212ENST00000545459 CDC42SE1Q9NRR8 79 aa1.27□□□□□ -2.21
LPCAT3-212ENST00000545459 KRTAP25-1Q3LHN0 102 aa1.26□□□□□ -2.21
LPCAT3-212ENST00000545459 KRTAP5-7Q6L8G8 165 aa1.26□□□□□ -2.21
LPCAT3-212ENST00000545459 AHNAK2Q8IVF2 5795 aa1.25□□□□□ -2.21
LPCAT3-212ENST00000545459 MIR22HGQ0VDD5 57 aa1.25□□□□□ -2.21
LPCAT3-212ENST00000545459 KRTAP12-1P59990 96 aa1.24□□□□□ -2.21
LPCAT3-212ENST00000545459 SPATA8Q6RVD6 105 aa1.24□□□□□ -2.21
LPCAT3-212ENST00000545459 LCE3DQ9BYE3 92 aa1.24□□□□□ -2.21
LPCAT3-212ENST00000545459 KRTAP5-2Q701N4 177 aa1.23□□□□□ -2.21
LPCAT3-212ENST00000545459 C10orf95Q9H7T3 257 aa1.23□□□□□ -2.21
LPCAT3-212ENST00000545459 KRTAP20-2Q3LI61 65 aa1.22□□□□□ -2.21
LPCAT3-212ENST00000545459 COA5Q86WW8 74 aa1.22□□□□□ -2.21
LPCAT3-212ENST00000545459 TNP1P09430 55 aa1.2□□□□□ -2.22
LPCAT3-212ENST00000545459 KRTAP5-5Q701N2 237 aaPredicted RBP1.2□□□□□ -2.22
LPCAT3-212ENST00000545459 KRTAP12-3P60328 96 aa1.19□□□□□ -2.22
LPCAT3-212ENST00000545459 KRTAP12-4P60329 112 aa1.19□□□□□ -2.22
LPCAT3-212ENST00000545459 PRR15LQ9BU68 103 aa1.19□□□□□ -2.22
LPCAT3-212ENST00000545459 LINC01558Q9Y6Z2 57 aa1.19□□□□□ -2.22
LPCAT3-212ENST00000545459 A0A1B0GU69 56 aa1.16□□□□□ -2.22
LPCAT3-212ENST00000545459 UQCR11O14957 56 aa1.16□□□□□ -2.22
LPCAT3-212ENST00000545459 OBSCNQ5VST9 7968 aa1.13□□□□□ -2.23
LPCAT3-212ENST00000545459 INE1O15225 51 aa1.13□□□□□ -2.23
LPCAT3-212ENST00000545459 KRTAP5-8O75690 187 aa1.12□□□□□ -2.23
LPCAT3-212ENST00000545459 LCE1CQ5T751 118 aa1.12□□□□□ -2.23
LPCAT3-212ENST00000545459 LCE1BQ5T7P3 118 aa1.12□□□□□ -2.23
LPCAT3-212ENST00000545459 MT1AP04731 61 aa1.09□□□□□ -2.23
LPCAT3-212ENST00000545459 KRTAP6-1Q3LI64 71 aa1.09□□□□□ -2.23
LPCAT3-212ENST00000545459 MUC5ACP98088 5654 aa1.08□□□□□ -2.24
LPCAT3-212ENST00000545459 SYNE1Q8NF91 8797 aaKnown RBP1.07□□□□□ -2.24
LPCAT3-212ENST00000545459 KRTAP6-2Q3LI66 62 aa1.06□□□□□ -2.24
LPCAT3-212ENST00000545459 AHNAKQ09666 5890 aaKnown RBP1.06□□□□□ -2.24
LPCAT3-212ENST00000545459 MUC5BQ9HC84 5762 aaPredicted RBP1.04□□□□□ -2.24
LPCAT3-212ENST00000545459 MUC19Q7Z5P9 8384 aa0.85□□□□□ -2.27
LPCAT3-212ENST00000545459 PHGR1C9JFL3 82 aa0.77□□□□□ -2.29
LPCAT3-212ENST00000545459 KRTAP21-2Q3LI59 83 aa0.77□□□□□ -2.29
LPCAT3-212ENST00000545459 KRTAP21-1Q3LI58 79 aa0.58□□□□□ -2.32
LPCAT3-212ENST00000545459 PRM1P04553 51 aa0.54□□□□□ -2.32
LPCAT3-212ENST00000545459 MUC16Q8WXI7 14507 aa0.44□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 31.3 ms