RNA–Protein interactions for RNA: ENST00000545228.2

TSEN54-203, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-203ENST00000545228 KRTAP4-8Q9BYQ9 185 aa5.34□□□□□ -1.55
TSEN54-203ENST00000545228 ROMO1P60602 79 aa5.27□□□□□ -1.57
TSEN54-203ENST00000545228 LCE3BQ5TA77 95 aa5.25□□□□□ -1.57
TSEN54-203ENST00000545228 KTN1-AS1Q86SY8 53 aa5.22□□□□□ -1.57
TSEN54-203ENST00000545228 KRTAP23-1A1A580 65 aa5.19□□□□□ -1.58
TSEN54-203ENST00000545228 LCE3AQ5TA76 89 aa5.19□□□□□ -1.58
TSEN54-203ENST00000545228 KRTAP19-7Q3SYF9 63 aa5.13□□□□□ -1.59
TSEN54-203ENST00000545228 PP632Q6XCG6 107 aa5.12□□□□□ -1.59
TSEN54-203ENST00000545228 H3BS24 57 aa5.11□□□□□ -1.59
TSEN54-203ENST00000545228 KRTAP19-5Q3LI72 72 aa5.11□□□□□ -1.59
TSEN54-203ENST00000545228 MT1EP04732 61 aa5.1□□□□□ -1.59
TSEN54-203ENST00000545228 KRTAP12-3P60328 96 aa5.05□□□□□ -1.6
TSEN54-203ENST00000545228 KRTAP19-3Q7Z4W3 81 aa5.02□□□□□ -1.61
TSEN54-203ENST00000545228 PRAC1Q96KF2 57 aa5.01□□□□□ -1.61
TSEN54-203ENST00000545228 DSTQ03001 7570 aaKnown RBP4.97□□□□□ -1.61
TSEN54-203ENST00000545228 MT1GP13640 62 aa4.97□□□□□ -1.61
TSEN54-203ENST00000545228 GPR98Q8WXG9 6306 aa4.96□□□□□ -1.62
TSEN54-203ENST00000545228 LCE5AQ5TCM9 118 aa4.96□□□□□ -1.62
TSEN54-203ENST00000545228 KRTAP19-4Q3LI73 84 aa4.94□□□□□ -1.62
TSEN54-203ENST00000545228 KRTAP4-9Q9BYQ8 210 aa4.94□□□□□ -1.62
TSEN54-203ENST00000545228 A0A0A0MQY5 61 aa4.93□□□□□ -1.62
TSEN54-203ENST00000545228 MT1LQ93083 61 aa4.93□□□□□ -1.62
TSEN54-203ENST00000545228 KRTAP15-1Q3LI76 137 aa4.85□□□□□ -1.63
TSEN54-203ENST00000545228 MT1MQ8N339 61 aa4.83□□□□□ -1.64
TSEN54-203ENST00000545228 LCE1DQ5T752 114 aa4.79□□□□□ -1.64
TSEN54-203ENST00000545228 LCE4AQ5TA78 99 aa4.73□□□□□ -1.65
TSEN54-203ENST00000545228 MT4P47944 62 aa4.72□□□□□ -1.65
TSEN54-203ENST00000545228 LCE3CQ5T5A8 94 aa4.67□□□□□ -1.66
TSEN54-203ENST00000545228 KRTAP4-7Q9BYR0 210 aa4.6□□□□□ -1.67
TSEN54-203ENST00000545228 KRTAP4-3Q9BYR4 195 aa4.6□□□□□ -1.67
TSEN54-203ENST00000545228 KRTAP5-10Q6L8G5 202 aa4.59□□□□□ -1.67
TSEN54-203ENST00000545228 HMCN1Q96RW7 5635 aa4.59□□□□□ -1.67
TSEN54-203ENST00000545228 KRTAP5-4Q6L8H1 288 aa4.58□□□□□ -1.68
TSEN54-203ENST00000545228 KRTAP4-6Q9BYQ5 205 aa4.55□□□□□ -1.68
TSEN54-203ENST00000545228 AHNAK2Q8IVF2 5795 aa4.5□□□□□ -1.69
TSEN54-203ENST00000545228 KRTAP5-7Q6L8G8 165 aa4.44□□□□□ -1.7
TSEN54-203ENST00000545228 KRTAP5-3Q6L8H2 238 aa4.43□□□□□ -1.7
TSEN54-203ENST00000545228 KRTAP5-5Q701N2 237 aaPredicted RBP4.37□□□□□ -1.71
TSEN54-203ENST00000545228 LOC100996750A0A140TA64 210 aa4.35□□□□□ -1.71
TSEN54-203ENST00000545228 KRTAP20-2Q3LI61 65 aa4.35□□□□□ -1.71
TSEN54-203ENST00000545228 SPRR5A0A1B0GTR4 108 aa4.3□□□□□ -1.72
TSEN54-203ENST00000545228 KRTAP12-4P60329 112 aa4.3□□□□□ -1.72
TSEN54-203ENST00000545228 KRTAP9-6A8MVA2 160 aa4.27□□□□□ -1.73
TSEN54-203ENST00000545228 MT1AP04731 61 aa4.24□□□□□ -1.73
TSEN54-203ENST00000545228 LUZP6Q538Z0 58 aa4.21□□□□□ -1.74
TSEN54-203ENST00000545228 SYNE1Q8NF91 8797 aaKnown RBP4.17□□□□□ -1.74
TSEN54-203ENST00000545228 KRTAP6-1Q3LI64 71 aa4.12□□□□□ -1.75
TSEN54-203ENST00000545228 KRTAP9-4Q9BYQ2 154 aa4.04□□□□□ -1.76
TSEN54-203ENST00000545228 KRTAP4-11Q9BYQ6 195 aa4.03□□□□□ -1.76
TSEN54-203ENST00000545228 NDUFAF8A1L188 74 aa4.01□□□□□ -1.77
TSEN54-203ENST00000545228 KRTAP5-2Q701N4 177 aa3.96□□□□□ -1.78
TSEN54-203ENST00000545228 MT3P25713 68 aa3.91□□□□□ -1.78
TSEN54-203ENST00000545228 KRTAP5-8O75690 187 aa3.9□□□□□ -1.79
TSEN54-203ENST00000545228 KRTAP6-2Q3LI66 62 aa3.89□□□□□ -1.79
TSEN54-203ENST00000545228 MUC5ACP98088 5654 aa3.79□□□□□ -1.8
TSEN54-203ENST00000545228 KRTAP9-9Q9BYP9 154 aa3.76□□□□□ -1.81
TSEN54-203ENST00000545228 AHNAKQ09666 5890 aaKnown RBP3.75□□□□□ -1.81
TSEN54-203ENST00000545228 OBSCNQ5VST9 7968 aa3.73□□□□□ -1.81
TSEN54-203ENST00000545228 MUC5BQ9HC84 5762 aaPredicted RBP3.72□□□□□ -1.81
TSEN54-203ENST00000545228 KRTAP5-1Q6L8H4 278 aa3.6□□□□□ -1.83
TSEN54-203ENST00000545228 LCE1EQ5T753 118 aa3.5□□□□□ -1.85
TSEN54-203ENST00000545228 INE1O15225 51 aa3.48□□□□□ -1.85
TSEN54-203ENST00000545228 LCE3DQ9BYE3 92 aa3.47□□□□□ -1.85
TSEN54-203ENST00000545228 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
TSEN54-203ENST00000545228 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
TSEN54-203ENST00000545228 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
TSEN54-203ENST00000545228 KRTAP4-2Q9BYR5 136 aa3.2□□□□□ -1.9
TSEN54-203ENST00000545228 KRTAP4-12Q9BQ66 201 aa2.99□□□□□ -1.93
TSEN54-203ENST00000545228 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.98□□□□□ -1.93
TSEN54-203ENST00000545228 KRTAP5-11Q6L8G4 156 aa2.9□□□□□ -1.95
TSEN54-203ENST00000545228 LCE1FQ5T754 118 aa2.84□□□□□ -1.95
TSEN54-203ENST00000545228 KRTAP21-2Q3LI59 83 aa2.71□□□□□ -1.98
TSEN54-203ENST00000545228 PHGR1C9JFL3 82 aa2.7□□□□□ -1.98
TSEN54-203ENST00000545228 PRM1P04553 51 aa2.67□□□□□ -1.98
TSEN54-203ENST00000545228 KRTAP4-4Q9BYR3 166 aa2.4□□□□□ -2.03
TSEN54-203ENST00000545228 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
TSEN54-203ENST00000545228 KRTAP21-1Q3LI58 79 aa2.05□□□□□ -2.08
TSEN54-203ENST00000545228 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 79.9 ms