RNA–Protein interactions for RNA: ENST00000545223.1

PRKAB1-208, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 2

Gene PRKAB1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-208ENST00000545223 PRO2289Q9P1D8 64 aa2.95□□□□□ -1.94
PRKAB1-208ENST00000545223 A6NED7 52 aa2.94□□□□□ -1.94
PRKAB1-208ENST00000545223 KRTAP2-2Q9BYT5 123 aa2.94□□□□□ -1.94
PRKAB1-208ENST00000545223 KRTAP2-1Q9BYU5 128 aa2.94□□□□□ -1.94
PRKAB1-208ENST00000545223 KRTAP10-7P60409 375 aaPredicted RBP2.93□□□□□ -1.94
PRKAB1-208ENST00000545223 C10orf95Q9H7T3 257 aa2.89□□□□□ -1.95
PRKAB1-208ENST00000545223 KRTAP10-12P60413 245 aa2.87□□□□□ -1.95
PRKAB1-208ENST00000545223 CDC42SE1Q9NRR8 79 aa2.85□□□□□ -1.95
PRKAB1-208ENST00000545223 K7ERS5 55 aa2.82□□□□□ -1.96
PRKAB1-208ENST00000545223 KRTAP8-1Q8IUC2 63 aa2.79□□□□□ -1.96
PRKAB1-208ENST00000545223 TNP1P09430 55 aa2.78□□□□□ -1.96
PRKAB1-208ENST00000545223 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.78□□□□□ -1.96
PRKAB1-208ENST00000545223 BRK1Q8WUW1 75 aa2.77□□□□□ -1.97
PRKAB1-208ENST00000545223 SPRR2FQ96RM1 72 aa2.75□□□□□ -1.97
PRKAB1-208ENST00000545223 AHNAK2Q8IVF2 5795 aa2.74□□□□□ -1.97
PRKAB1-208ENST00000545223 LCE3AQ5TA76 89 aa2.74□□□□□ -1.97
PRKAB1-208ENST00000545223 DSTQ03001 7570 aaKnown RBP2.74□□□□□ -1.97
PRKAB1-208ENST00000545223 SPRR2EP22531 72 aa2.72□□□□□ -1.97
PRKAB1-208ENST00000545223 SPRR2BP35325 72 aa2.72□□□□□ -1.97
PRKAB1-208ENST00000545223 SPRR2AP35326 72 aa2.72□□□□□ -1.97
PRKAB1-208ENST00000545223 ROMO1P60602 79 aa2.72□□□□□ -1.97
PRKAB1-208ENST00000545223 KRTAP19-7Q3SYF9 63 aa2.72□□□□□ -1.97
PRKAB1-208ENST00000545223 KRTAP25-1Q3LHN0 102 aa2.7□□□□□ -1.98
PRKAB1-208ENST00000545223 KRTAP19-5Q3LI72 72 aa2.7□□□□□ -1.98
PRKAB1-208ENST00000545223 HMCN1Q96RW7 5635 aa2.69□□□□□ -1.98
PRKAB1-208ENST00000545223 MT1EP04732 61 aa2.67□□□□□ -1.98
PRKAB1-208ENST00000545223 LCE1AQ5T7P2 110 aa2.67□□□□□ -1.98
PRKAB1-208ENST00000545223 KRTAP5-11Q6L8G4 156 aa2.66□□□□□ -1.98
PRKAB1-208ENST00000545223 KRTAP5-10Q6L8G5 202 aa2.66□□□□□ -1.98
PRKAB1-208ENST00000545223 SPRR2DP22532 72 aa2.65□□□□□ -1.99
PRKAB1-208ENST00000545223 KRTAP5-7Q6L8G8 165 aa2.64□□□□□ -1.99
PRKAB1-208ENST00000545223 KRTAP12-3P60328 96 aa2.61□□□□□ -1.99
PRKAB1-208ENST00000545223 PMAIP1Q13794 54 aa2.61□□□□□ -1.99
PRKAB1-208ENST00000545223 KRTAP19-3Q7Z4W3 81 aa2.59□□□□□ -1.99
PRKAB1-208ENST00000545223 MT1LQ93083 61 aa2.59□□□□□ -1.99
PRKAB1-208ENST00000545223 PRO0628Q9UI54 55 aa2.58□□□□□ -2
PRKAB1-208ENST00000545223 MT1GP13640 62 aa2.55□□□□□ -2
PRKAB1-208ENST00000545223 PP632Q6XCG6 107 aa2.54□□□□□ -2
PRKAB1-208ENST00000545223 AHNAKQ09666 5890 aaKnown RBP2.54□□□□□ -2
PRKAB1-208ENST00000545223 MT1MQ8N339 61 aa2.53□□□□□ -2
PRKAB1-208ENST00000545223 PRAC1Q96KF2 57 aa2.53□□□□□ -2
PRKAB1-208ENST00000545223 KRTAP4-3Q9BYR4 195 aa2.52□□□□□ -2.01
PRKAB1-208ENST00000545223 MT3P25713 68 aa2.49□□□□□ -2.01
PRKAB1-208ENST00000545223 SPRR5A0A1B0GTR4 108 aa2.46□□□□□ -2.02
PRKAB1-208ENST00000545223 LCE3CQ5T5A8 94 aa2.43□□□□□ -2.02
PRKAB1-208ENST00000545223 NDUFAF8A1L188 74 aa2.42□□□□□ -2.02
PRKAB1-208ENST00000545223 LCE1EQ5T753 118 aa2.42□□□□□ -2.02
PRKAB1-208ENST00000545223 KTN1-AS1Q86SY8 53 aa2.42□□□□□ -2.02
PRKAB1-208ENST00000545223 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.03
PRKAB1-208ENST00000545223 MUC5ACP98088 5654 aa2.39□□□□□ -2.03
PRKAB1-208ENST00000545223 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
PRKAB1-208ENST00000545223 KRTAP9-6A8MVA2 160 aa2.34□□□□□ -2.03
PRKAB1-208ENST00000545223 KRTAP5-4Q6L8H1 288 aa2.34□□□□□ -2.03
PRKAB1-208ENST00000545223 KRTAP4-4Q9BYR3 166 aa2.32□□□□□ -2.04
PRKAB1-208ENST00000545223 MT4P47944 62 aa2.31□□□□□ -2.04
PRKAB1-208ENST00000545223 SYNE1Q8NF91 8797 aaKnown RBP2.29□□□□□ -2.04
PRKAB1-208ENST00000545223 KRTAP5-5Q701N2 237 aaPredicted RBP2.29□□□□□ -2.04
PRKAB1-208ENST00000545223 LCE1FQ5T754 118 aa2.21□□□□□ -2.06
PRKAB1-208ENST00000545223 KRTAP6-1Q3LI64 71 aa2.2□□□□□ -2.06
PRKAB1-208ENST00000545223 MT1AP04731 61 aa2.19□□□□□ -2.06
PRKAB1-208ENST00000545223 KRTAP12-4P60329 112 aa2.14□□□□□ -2.07
PRKAB1-208ENST00000545223 KRTAP20-2Q3LI61 65 aa2.14□□□□□ -2.07
PRKAB1-208ENST00000545223 OBSCNQ5VST9 7968 aa2.1□□□□□ -2.07
PRKAB1-208ENST00000545223 KRTAP5-8O75690 187 aa2.05□□□□□ -2.08
PRKAB1-208ENST00000545223 KRTAP6-2Q3LI66 62 aa2.05□□□□□ -2.08
PRKAB1-208ENST00000545223 KRTAP5-2Q701N4 177 aa2.03□□□□□ -2.08
PRKAB1-208ENST00000545223 LUZP6Q538Z0 58 aa1.99□□□□□ -2.09
PRKAB1-208ENST00000545223 LCE3EQ5T5B0 92 aa1.85□□□□□ -2.11
PRKAB1-208ENST00000545223 LCE3DQ9BYE3 92 aa1.78□□□□□ -2.12
PRKAB1-208ENST00000545223 LCE1BQ5T7P3 118 aa1.69□□□□□ -2.14
PRKAB1-208ENST00000545223 LCE1CQ5T751 118 aa1.64□□□□□ -2.15
PRKAB1-208ENST00000545223 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
PRKAB1-208ENST00000545223 INE1O15225 51 aa1.48□□□□□ -2.17
PRKAB1-208ENST00000545223 KRTAP21-2Q3LI59 83 aa1.45□□□□□ -2.18
PRKAB1-208ENST00000545223 PRM1P04553 51 aa1.43□□□□□ -2.18
PRKAB1-208ENST00000545223 MUC19Q7Z5P9 8384 aa1.4□□□□□ -2.19
PRKAB1-208ENST00000545223 KRTAP21-1Q3LI58 79 aa1.21□□□□□ -2.22
PRKAB1-208ENST00000545223 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 140.5 ms