RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	AGL	P35573	1532 aa		-1.71	□□□□□ -2.68
RAP1B-231	ENST00000544639		H0YGX0	51 aa		-1.72	□□□□□ -2.68
RAP1B-231	ENST00000544639	LOC400499	M0QZD8	3231 aa		-1.73	□□□□□ -2.69
RAP1B-231	ENST00000544639	CCDC18	Q5T9S5	1454 aa		-1.73	□□□□□ -2.69
RAP1B-231	ENST00000544639	KRTAP19-2	Q3LHN2	52 aa		-1.73	□□□□□ -2.69
RAP1B-231	ENST00000544639	GNG2	P59768	71 aa		-1.74	□□□□□ -2.69
RAP1B-231	ENST00000544639	TFF3	Q07654	80 aa		-1.74	□□□□□ -2.69
RAP1B-231	ENST00000544639	ASPM	Q8IZT6	3477 aa		-1.76	□□□□□ -2.69
RAP1B-231	ENST00000544639	TRPM2	O94759	1503 aa		-1.76	□□□□□ -2.69
RAP1B-231	ENST00000544639	IQGAP3	Q86VI3	1631 aa		-1.77	□□□□□ -2.69
RAP1B-231	ENST00000544639	SMIM2	Q9BVW6	85 aa		-1.77	□□□□□ -2.69
RAP1B-231	ENST00000544639	RB1CC1	Q8TDY2	1594 aa		-1.77	□□□□□ -2.69
RAP1B-231	ENST00000544639	ABCA5	Q8WWZ7	1642 aa		-1.78	□□□□□ -2.69
RAP1B-231	ENST00000544639	UGGT2	Q9NYU1	1516 aa		-1.79	□□□□□ -2.7
RAP1B-231	ENST00000544639	DEFB133	Q30KQ1	61 aa		-1.79	□□□□□ -2.7
RAP1B-231	ENST00000544639	CLTCL1	P53675	1640 aa		-1.8	□□□□□ -2.7
RAP1B-231	ENST00000544639	BRCA2	P51587	3418 aa		-1.8	□□□□□ -2.7
RAP1B-231	ENST00000544639	RHPN1-AS1	Q9BWJ2	59 aa		-1.8	□□□□□ -2.7
RAP1B-231	ENST00000544639	PLN	P26678	52 aa		-1.81	□□□□□ -2.7
RAP1B-231	ENST00000544639	CPS1	P31327	1500 aa		-1.81	□□□□□ -2.7
RAP1B-231	ENST00000544639	PRX	Q9BXM0	1461 aa		-1.82	□□□□□ -2.7
RAP1B-231	ENST00000544639	VCAN	P13611	3396 aa		-1.82	□□□□□ -2.7
RAP1B-231	ENST00000544639	CD52	P31358	61 aa		-1.83	□□□□□ -2.7
RAP1B-231	ENST00000544639	CENPF	P49454	3210 aa		-1.84	□□□□□ -2.7
RAP1B-231	ENST00000544639	ABCA10	Q8WWZ4	1543 aa		-1.84	□□□□□ -2.7
RAP1B-231	ENST00000544639	PDCD5	O14737	125 aa		-1.84	□□□□□ -2.7
RAP1B-231	ENST00000544639	LINC01590	Q5TEZ4	76 aa		-1.84	□□□□□ -2.7
RAP1B-231	ENST00000544639	SMCO4	Q9NRQ5	59 aa		-1.84	□□□□□ -2.7
RAP1B-231	ENST00000544639	DDX60	Q8IY21	1712 aa	Known RBP	-1.85	□□□□□ -2.71
RAP1B-231	ENST00000544639	CDH23	Q9H251	3354 aa		-1.85	□□□□□ -2.71
RAP1B-231	ENST00000544639	ADCY10	Q96PN6	1610 aa		-1.87	□□□□□ -2.71
RAP1B-231	ENST00000544639	IQGAP1	P46940	1657 aa		-1.87	□□□□□ -2.71
RAP1B-231	ENST00000544639	EFCAB5	A4FU69	1503 aa		-1.87	□□□□□ -2.71
RAP1B-231	ENST00000544639	VPS13A	Q96RL7	3174 aa		-1.88	□□□□□ -2.71
RAP1B-231	ENST00000544639	HTN1	P15515	57 aa		-1.88	□□□□□ -2.71
RAP1B-231	ENST00000544639	TOMM7	Q9P0U1	55 aa		-1.88	□□□□□ -2.71
RAP1B-231	ENST00000544639	NFAT5	O94916	1531 aa		-1.88	□□□□□ -2.71
RAP1B-231	ENST00000544639		A0A096LNI7	61 aa		-1.89	□□□□□ -2.71
RAP1B-231	ENST00000544639	NDUFA1	O15239	70 aa		-1.91	□□□□□ -2.72
RAP1B-231	ENST00000544639	DEFB124	Q8NES8	71 aa		-1.91	□□□□□ -2.72
RAP1B-231	ENST00000544639	FANCD2	Q9BXW9	1451 aa		-1.93	□□□□□ -2.72
RAP1B-231	ENST00000544639		A0A087WWC5	75 aa		-1.94	□□□□□ -2.72
RAP1B-231	ENST00000544639	ABCC8	Q09428	1581 aa		-1.94	□□□□□ -2.72
RAP1B-231	ENST00000544639	DUOX1	Q9NRD9	1551 aa		-1.97	□□□□□ -2.72
RAP1B-231	ENST00000544639	SMIM5	Q71RC9	77 aa		-1.97	□□□□□ -2.72
RAP1B-231	ENST00000544639	CMC2	Q9NRP2	79 aa		-1.99	□□□□□ -2.73
RAP1B-231	ENST00000544639	TOP2A	P11388	1531 aa	Known RBP	-2.01	□□□□□ -2.73
RAP1B-231	ENST00000544639	ERICH3	Q5RHP9	1530 aa		-2.01	□□□□□ -2.73
RAP1B-231	ENST00000544639	SAMD9L	Q8IVG5	1584 aa		-2.02	□□□□□ -2.73
RAP1B-231	ENST00000544639	UTRN	P46939	3433 aa		-2.03	□□□□□ -2.73
RAP1B-231	ENST00000544639	ATP7A	Q04656	1500 aa		-2.08	□□□□□ -2.74
RAP1B-231	ENST00000544639	LINC01556	Q5JQF7	62 aa		-2.09	□□□□□ -2.74
RAP1B-231	ENST00000544639	RPL39	P62891	51 aa	Known RBP	-2.1	□□□□□ -2.75
RAP1B-231	ENST00000544639		H3BUX3	64 aa		-2.11	□□□□□ -2.75
RAP1B-231	ENST00000544639	MROH2B	Q7Z745	1585 aa		-2.11	□□□□□ -2.75
RAP1B-231	ENST00000544639	RPL39L	Q96EH5	51 aa	Known RBP	-2.16	□□□□□ -2.76
RAP1B-231	ENST00000544639	DEFB104A	Q8WTQ1	72 aa		-2.17	□□□□□ -2.76
RAP1B-231	ENST00000544639	GOLGB1	Q14789	3259 aa	Known RBP	-2.26	□□□□□ -2.77
RAP1B-231	ENST00000544639	IQGAP2	Q13576	1575 aa		-2.28	□□□□□ -2.77
RAP1B-231	ENST00000544639	SNRPGP15	A8MWD9	76 aa		-2.29	□□□□□ -2.78
RAP1B-231	ENST00000544639		K7EIM0	57 aa		-2.29	□□□□□ -2.78
RAP1B-231	ENST00000544639		A0A096LPF7	62 aa		-2.31	□□□□□ -2.78
RAP1B-231	ENST00000544639	SMIM31	A0A1B0GVY4	71 aa		-2.32	□□□□□ -2.78
RAP1B-231	ENST00000544639	APELA	P0DMC3	54 aa		-2.33	□□□□□ -2.78
RAP1B-231	ENST00000544639	PRCD	Q00LT1	54 aa		-2.38	□□□□□ -2.79
RAP1B-231	ENST00000544639	ARHGAP5-AS1	Q96IT6	56 aa		-2.4	□□□□□ -2.79
RAP1B-231	ENST00000544639	TOMM5	Q8N4H5	51 aa		-2.42	□□□□□ -2.8
RAP1B-231	ENST00000544639	TMEM167A	Q8TBQ9	72 aa		-2.42	□□□□□ -2.8
RAP1B-231	ENST00000544639	HTN3	P15516	51 aa		-2.44	□□□□□ -2.8
RAP1B-231	ENST00000544639		Q9Y3F1	56 aa		-2.46	□□□□□ -2.8
RAP1B-231	ENST00000544639	GCC2	Q8IWJ2	1684 aa		-2.57	□□□□□ -2.82
RAP1B-231	ENST00000544639	SNRPG	P62308	76 aa	Known RBP	-2.59	□□□□□ -2.82
RAP1B-231	ENST00000544639		H3BSH0	61 aa		-2.62	□□□□□ -2.83
RAP1B-231	ENST00000544639	RPL39P5	Q59GN2	51 aa		-2.63	□□□□□ -2.83
RAP1B-231	ENST00000544639	COX14	Q96I36	57 aa		-2.63	□□□□□ -2.83
RAP1B-231	ENST00000544639	DEFB108A	A8MXU0	73 aa		-2.68	□□□□□ -2.84
RAP1B-231	ENST00000544639	DEFB108B	Q8NET1	73 aa		-2.81	□□□□□ -2.86
RAP1B-231	ENST00000544639	STATH	P02808	62 aa		-3.02	□□□□□ -2.89

Retrieved 78 of 20,778 RNA–protein pairs in 118 ms