RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 UQCR11O14957 56 aa5.63□□□□□ -1.51
CD4-212ENST00000544344 MT1GP13640 62 aa5.63□□□□□ -1.51
CD4-212ENST00000544344 SPATA8Q6RVD6 105 aa5.63□□□□□ -1.51
CD4-212ENST00000544344 KRTAP5-4Q6L8H1 288 aa5.6□□□□□ -1.51
CD4-212ENST00000544344 KRTAP4-6Q9BYQ5 205 aa5.58□□□□□ -1.52
CD4-212ENST00000544344 KRTAP5-7Q6L8G8 165 aa5.57□□□□□ -1.52
CD4-212ENST00000544344 MT1MQ8N339 61 aa5.56□□□□□ -1.52
CD4-212ENST00000544344 MIR22HGQ0VDD5 57 aa5.55□□□□□ -1.52
CD4-212ENST00000544344 A8MU10 97 aa5.54□□□□□ -1.52
CD4-212ENST00000544344 KRTAP19-5Q3LI72 72 aa5.54□□□□□ -1.52
CD4-212ENST00000544344 PP632Q6XCG6 107 aa5.54□□□□□ -1.52
CD4-212ENST00000544344 CAMK2N1Q7Z7J9 78 aa5.53□□□□□ -1.52
CD4-212ENST00000544344 KRTAP13-4Q3LI77 160 aa5.52□□□□□ -1.53
CD4-212ENST00000544344 A0A1B0GU33 70 aa5.5□□□□□ -1.53
CD4-212ENST00000544344 PMAIP1Q13794 54 aa5.5□□□□□ -1.53
CD4-212ENST00000544344 KRTAP5-3Q6L8H2 238 aa5.49□□□□□ -1.53
CD4-212ENST00000544344 KRTAP4-3Q9BYR4 195 aa5.47□□□□□ -1.53
CD4-212ENST00000544344 A0A0D9SG42 100 aa5.46□□□□□ -1.54
CD4-212ENST00000544344 MT1LQ93083 61 aa5.46□□□□□ -1.54
CD4-212ENST00000544344 KTN1-AS1Q86SY8 53 aa5.39□□□□□ -1.55
CD4-212ENST00000544344 K7ERS5 55 aa5.31□□□□□ -1.56
CD4-212ENST00000544344 KRTAP20-2Q3LI61 65 aa5.3□□□□□ -1.56
CD4-212ENST00000544344 H3BS24 57 aa5.28□□□□□ -1.56
CD4-212ENST00000544344 SPRR5A0A1B0GTR4 108 aa5.27□□□□□ -1.57
CD4-212ENST00000544344 KRTAP4-7Q9BYR0 210 aa5.21□□□□□ -1.58
CD4-212ENST00000544344 C10orf95Q9H7T3 257 aa5.21□□□□□ -1.58
CD4-212ENST00000544344 KRTAP5-5Q701N2 237 aaPredicted RBP5.18□□□□□ -1.58
CD4-212ENST00000544344 LCE3AQ5TA76 89 aa5.17□□□□□ -1.58
CD4-212ENST00000544344 SPINT4Q6UDR6 99 aa5.16□□□□□ -1.58
CD4-212ENST00000544344 KRTAP12-1P59990 96 aa5.15□□□□□ -1.59
CD4-212ENST00000544344 ROMO1P60602 79 aa5.11□□□□□ -1.59
CD4-212ENST00000544344 LOC100996750A0A140TA64 210 aa5.08□□□□□ -1.6
CD4-212ENST00000544344 KRTAP12-4P60329 112 aa5.07□□□□□ -1.6
CD4-212ENST00000544344 PRAC1Q96KF2 57 aa5.05□□□□□ -1.6
CD4-212ENST00000544344 SYNE1Q8NF91 8797 aaKnown RBP5.02□□□□□ -1.61
CD4-212ENST00000544344 KRTAP25-1Q3LHN0 102 aa5□□□□□ -1.61
CD4-212ENST00000544344 TNP1P09430 55 aa4.97□□□□□ -1.61
CD4-212ENST00000544344 KRTAP12-3P60328 96 aa4.96□□□□□ -1.62
CD4-212ENST00000544344 KRTAP4-11Q9BYQ6 195 aa4.95□□□□□ -1.62
CD4-212ENST00000544344 MUC5ACP98088 5654 aa4.86□□□□□ -1.63
CD4-212ENST00000544344 AHNAKQ09666 5890 aaKnown RBP4.84□□□□□ -1.63
CD4-212ENST00000544344 KRTAP19-4Q3LI73 84 aa4.84□□□□□ -1.63
CD4-212ENST00000544344 KRTAP5-2Q701N4 177 aa4.83□□□□□ -1.64
CD4-212ENST00000544344 KRTAP5-8O75690 187 aa4.82□□□□□ -1.64
CD4-212ENST00000544344 MUC5BQ9HC84 5762 aaPredicted RBP4.78□□□□□ -1.64
CD4-212ENST00000544344 KRTAP23-1A1A580 65 aa4.74□□□□□ -1.65
CD4-212ENST00000544344 KRTAP4-12Q9BQ66 201 aa4.69□□□□□ -1.66
CD4-212ENST00000544344 KRTAP6-1Q3LI64 71 aa4.66□□□□□ -1.66
CD4-212ENST00000544344 MT1AP04731 61 aa4.63□□□□□ -1.67
CD4-212ENST00000544344 KRTAP9-9Q9BYP9 154 aa4.59□□□□□ -1.67
CD4-212ENST00000544344 OBSCNQ5VST9 7968 aa4.59□□□□□ -1.68
CD4-212ENST00000544344 KRTAP6-2Q3LI66 62 aa4.53□□□□□ -1.68
CD4-212ENST00000544344 LCE3CQ5T5A8 94 aa4.53□□□□□ -1.68
CD4-212ENST00000544344 KRTAP9-4Q9BYQ2 154 aa4.53□□□□□ -1.68
CD4-212ENST00000544344 KRTAP15-1Q3LI76 137 aa4.48□□□□□ -1.69
CD4-212ENST00000544344 KRTAP5-1Q6L8H4 278 aa4.42□□□□□ -1.7
CD4-212ENST00000544344 KRTAP9-6A8MVA2 160 aa4.35□□□□□ -1.71
CD4-212ENST00000544344 MT3P25713 68 aa4.23□□□□□ -1.73
CD4-212ENST00000544344 LUZP6Q538Z0 58 aa4.17□□□□□ -1.74
CD4-212ENST00000544344 NDUFAF8A1L188 74 aa4.15□□□□□ -1.75
CD4-212ENST00000544344 LCE1EQ5T753 118 aa4.02□□□□□ -1.77
CD4-212ENST00000544344 KRTAP4-2Q9BYR5 136 aa3.94□□□□□ -1.78
CD4-212ENST00000544344 LCE1BQ5T7P3 118 aa3.8□□□□□ -1.8
CD4-212ENST00000544344 A0A0A0MQY5 61 aa3.79□□□□□ -1.8
CD4-212ENST00000544344 LCE1CQ5T751 118 aa3.74□□□□□ -1.81
CD4-212ENST00000544344 INE1O15225 51 aa3.58□□□□□ -1.84
CD4-212ENST00000544344 KRTAP5-11Q6L8G4 156 aa3.51□□□□□ -1.85
CD4-212ENST00000544344 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
CD4-212ENST00000544344 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.36□□□□□ -1.87
CD4-212ENST00000544344 PHGR1C9JFL3 82 aa3.33□□□□□ -1.88
CD4-212ENST00000544344 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
CD4-212ENST00000544344 KRTAP21-2Q3LI59 83 aa3.09□□□□□ -1.91
CD4-212ENST00000544344 LCE3EQ5T5B0 92 aa2.97□□□□□ -1.93
CD4-212ENST00000544344 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
CD4-212ENST00000544344 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
CD4-212ENST00000544344 PRM1P04553 51 aa2.62□□□□□ -1.99
CD4-212ENST00000544344 KRTAP21-1Q3LI58 79 aa2.53□□□□□ -2
CD4-212ENST00000544344 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 35.2 ms