RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 KRTAP2-1Q9BYU5 128 aa6.5□□□□□ -1.37
TSFM-208ENST00000543727 LCE3BQ5TA77 95 aa6.47□□□□□ -1.37
TSFM-208ENST00000543727 MT1GP13640 62 aa6.45□□□□□ -1.38
TSFM-208ENST00000543727 PP632Q6XCG6 107 aa6.43□□□□□ -1.38
TSFM-208ENST00000543727 CDC42SE1Q9NRR8 79 aa6.42□□□□□ -1.38
TSFM-208ENST00000543727 MT1LQ93083 61 aa6.39□□□□□ -1.39
TSFM-208ENST00000543727 KRTAP23-1A1A580 65 aa6.36□□□□□ -1.39
TSFM-208ENST00000543727 KRTAP12-3P60328 96 aa6.36□□□□□ -1.39
TSFM-208ENST00000543727 MT1MQ8N339 61 aa6.3□□□□□ -1.4
TSFM-208ENST00000543727 ROMO1P60602 79 aa6.27□□□□□ -1.41
TSFM-208ENST00000543727 DSTQ03001 7570 aaKnown RBP6.2□□□□□ -1.42
TSFM-208ENST00000543727 KRTAP19-4Q3LI73 84 aa6.18□□□□□ -1.42
TSFM-208ENST00000543727 KRTAP15-1Q3LI76 137 aa6.04□□□□□ -1.44
TSFM-208ENST00000543727 KRTAP4-3Q9BYR4 195 aa6.04□□□□□ -1.44
TSFM-208ENST00000543727 KRTAP4-7Q9BYR0 210 aa5.99□□□□□ -1.45
TSFM-208ENST00000543727 LCE4AQ5TA78 99 aa5.97□□□□□ -1.45
TSFM-208ENST00000543727 BRK1Q8WUW1 75 aa5.97□□□□□ -1.45
TSFM-208ENST00000543727 KRTAP5-4Q6L8H1 288 aa5.89□□□□□ -1.47
TSFM-208ENST00000543727 LCE3CQ5T5A8 94 aa5.88□□□□□ -1.47
TSFM-208ENST00000543727 KRTAP4-9Q9BYQ8 210 aa5.86□□□□□ -1.47
TSFM-208ENST00000543727 LCE1DQ5T752 114 aa5.82□□□□□ -1.48
TSFM-208ENST00000543727 KRTAP5-5Q701N2 237 aaPredicted RBP5.77□□□□□ -1.49
TSFM-208ENST00000543727 MT4P47944 62 aa5.76□□□□□ -1.49
TSFM-208ENST00000543727 LOC100996750A0A140TA64 210 aa5.66□□□□□ -1.5
TSFM-208ENST00000543727 PMAIP1Q13794 54 aa5.64□□□□□ -1.51
TSFM-208ENST00000543727 KRTAP4-6Q9BYQ5 205 aa5.62□□□□□ -1.51
TSFM-208ENST00000543727 HMCN1Q96RW7 5635 aa5.61□□□□□ -1.51
TSFM-208ENST00000543727 KRTAP12-4P60329 112 aa5.59□□□□□ -1.51
TSFM-208ENST00000543727 SPRR5A0A1B0GTR4 108 aa5.58□□□□□ -1.52
TSFM-208ENST00000543727 KRTAP20-2Q3LI61 65 aa5.51□□□□□ -1.53
TSFM-208ENST00000543727 KRTAP9-6A8MVA2 160 aa5.48□□□□□ -1.53
TSFM-208ENST00000543727 MT1AP04731 61 aa5.46□□□□□ -1.54
TSFM-208ENST00000543727 PRO0628Q9UI54 55 aa5.46□□□□□ -1.54
TSFM-208ENST00000543727 GPR98Q8WXG9 6306 aa5.38□□□□□ -1.55
TSFM-208ENST00000543727 KRTAP6-1Q3LI64 71 aa5.36□□□□□ -1.55
TSFM-208ENST00000543727 SYNE1Q8NF91 8797 aaKnown RBP5.35□□□□□ -1.55
TSFM-208ENST00000543727 KRTAP5-3Q6L8H2 238 aa5.34□□□□□ -1.55
TSFM-208ENST00000543727 KRTAP5-10Q6L8G5 202 aa5.29□□□□□ -1.56
TSFM-208ENST00000543727 PRAC1Q96KF2 57 aa5.28□□□□□ -1.56
TSFM-208ENST00000543727 AHNAK2Q8IVF2 5795 aa5.27□□□□□ -1.57
TSFM-208ENST00000543727 KRTAP9-4Q9BYQ2 154 aa5.23□□□□□ -1.57
TSFM-208ENST00000543727 KRTAP5-2Q701N4 177 aa5.21□□□□□ -1.58
TSFM-208ENST00000543727 KTN1-AS1Q86SY8 53 aa5.17□□□□□ -1.58
TSFM-208ENST00000543727 KRTAP6-2Q3LI66 62 aa5.08□□□□□ -1.6
TSFM-208ENST00000543727 KRTAP5-7Q6L8G8 165 aa5.08□□□□□ -1.6
TSFM-208ENST00000543727 MT3P25713 68 aa5□□□□□ -1.61
TSFM-208ENST00000543727 KRTAP4-11Q9BYQ6 195 aa4.97□□□□□ -1.61
TSFM-208ENST00000543727 KRTAP4-12Q9BQ66 201 aa4.91□□□□□ -1.62
TSFM-208ENST00000543727 SVIPQ8NHG7 77 aa4.89□□□□□ -1.63
TSFM-208ENST00000543727 H3BS24 57 aa4.79□□□□□ -1.64
TSFM-208ENST00000543727 KRTAP5-8O75690 187 aa4.79□□□□□ -1.64
TSFM-208ENST00000543727 KRTAP9-9Q9BYP9 154 aa4.71□□□□□ -1.66
TSFM-208ENST00000543727 OBSCNQ5VST9 7968 aa4.69□□□□□ -1.66
TSFM-208ENST00000543727 KRTAP5-1Q6L8H4 278 aa4.6□□□□□ -1.67
TSFM-208ENST00000543727 LUZP6Q538Z0 58 aa4.57□□□□□ -1.68
TSFM-208ENST00000543727 LCE1EQ5T753 118 aa4.57□□□□□ -1.68
TSFM-208ENST00000543727 MUC5ACP98088 5654 aa4.32□□□□□ -1.72
TSFM-208ENST00000543727 LCE3DQ9BYE3 92 aa4.3□□□□□ -1.72
TSFM-208ENST00000543727 MUC5BQ9HC84 5762 aaPredicted RBP4.28□□□□□ -1.72
TSFM-208ENST00000543727 KRTAP4-2Q9BYR5 136 aa4.24□□□□□ -1.73
TSFM-208ENST00000543727 LCE1CQ5T751 118 aa4.22□□□□□ -1.73
TSFM-208ENST00000543727 LCE1BQ5T7P3 118 aa4.22□□□□□ -1.73
TSFM-208ENST00000543727 AHNAKQ09666 5890 aaKnown RBP4.2□□□□□ -1.74
TSFM-208ENST00000543727 LCE3EQ5T5B0 92 aa4.1□□□□□ -1.75
TSFM-208ENST00000543727 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.9□□□□□ -1.79
TSFM-208ENST00000543727 KRTAP5-11Q6L8G4 156 aa3.81□□□□□ -1.8
TSFM-208ENST00000543727 NDUFAF8A1L188 74 aa3.8□□□□□ -1.8
TSFM-208ENST00000543727 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
TSFM-208ENST00000543727 KRTAP21-2Q3LI59 83 aa3.54□□□□□ -1.84
TSFM-208ENST00000543727 PHGR1C9JFL3 82 aa3.26□□□□□ -1.89
TSFM-208ENST00000543727 A0A0A0MQY5 61 aa3.2□□□□□ -1.9
TSFM-208ENST00000543727 INE1O15225 51 aa3.2□□□□□ -1.9
TSFM-208ENST00000543727 PRM1P04553 51 aa3.18□□□□□ -1.9
TSFM-208ENST00000543727 KRTAP4-4Q9BYR3 166 aa3.12□□□□□ -1.91
TSFM-208ENST00000543727 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
TSFM-208ENST00000543727 KRTAP21-1Q3LI58 79 aa2.37□□□□□ -2.03
TSFM-208ENST00000543727 MUC16Q8WXI7 14507 aa2.16□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 138.9 ms