RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 KRTAP2-2Q9BYT5 123 aa6.66□□□□□ -1.34
COPS7A-216ENST00000543170 KRTAP2-1Q9BYU5 128 aa6.66□□□□□ -1.34
COPS7A-216ENST00000543170 LCE3BQ5TA77 95 aa6.64□□□□□ -1.35
COPS7A-216ENST00000543170 CDC42SE1Q9NRR8 79 aa6.62□□□□□ -1.35
COPS7A-216ENST00000543170 MT1GP13640 62 aa6.6□□□□□ -1.35
COPS7A-216ENST00000543170 MT1LQ93083 61 aa6.57□□□□□ -1.36
COPS7A-216ENST00000543170 PP632Q6XCG6 107 aa6.55□□□□□ -1.36
COPS7A-216ENST00000543170 KRTAP12-3P60328 96 aa6.52□□□□□ -1.37
COPS7A-216ENST00000543170 KRTAP23-1A1A580 65 aa6.49□□□□□ -1.37
COPS7A-216ENST00000543170 DSTQ03001 7570 aaKnown RBP6.49□□□□□ -1.37
COPS7A-216ENST00000543170 MT1MQ8N339 61 aa6.48□□□□□ -1.37
COPS7A-216ENST00000543170 ROMO1P60602 79 aa6.42□□□□□ -1.38
COPS7A-216ENST00000543170 KRTAP19-4Q3LI73 84 aa6.26□□□□□ -1.41
COPS7A-216ENST00000543170 KRTAP4-3Q9BYR4 195 aa6.26□□□□□ -1.41
COPS7A-216ENST00000543170 BRK1Q8WUW1 75 aa6.24□□□□□ -1.41
COPS7A-216ENST00000543170 KRTAP4-7Q9BYR0 210 aa6.21□□□□□ -1.42
COPS7A-216ENST00000543170 KRTAP15-1Q3LI76 137 aa6.19□□□□□ -1.42
COPS7A-216ENST00000543170 LCE4AQ5TA78 99 aa6.1□□□□□ -1.43
COPS7A-216ENST00000543170 KRTAP5-4Q6L8H1 288 aa6.05□□□□□ -1.44
COPS7A-216ENST00000543170 KRTAP4-9Q9BYQ8 210 aa6.05□□□□□ -1.44
COPS7A-216ENST00000543170 LCE3CQ5T5A8 94 aa6.03□□□□□ -1.44
COPS7A-216ENST00000543170 LCE1DQ5T752 114 aa5.99□□□□□ -1.45
COPS7A-216ENST00000543170 KRTAP5-5Q701N2 237 aaPredicted RBP5.95□□□□□ -1.46
COPS7A-216ENST00000543170 HMCN1Q96RW7 5635 aa5.94□□□□□ -1.46
COPS7A-216ENST00000543170 MT4P47944 62 aa5.93□□□□□ -1.46
COPS7A-216ENST00000543170 PMAIP1Q13794 54 aa5.88□□□□□ -1.47
COPS7A-216ENST00000543170 LOC100996750A0A140TA64 210 aa5.87□□□□□ -1.47
COPS7A-216ENST00000543170 KRTAP4-6Q9BYQ5 205 aa5.8□□□□□ -1.48
COPS7A-216ENST00000543170 PRO0628Q9UI54 55 aa5.74□□□□□ -1.49
COPS7A-216ENST00000543170 SPRR5A0A1B0GTR4 108 aa5.7□□□□□ -1.5
COPS7A-216ENST00000543170 KRTAP12-4P60329 112 aa5.7□□□□□ -1.5
COPS7A-216ENST00000543170 GPR98Q8WXG9 6306 aa5.69□□□□□ -1.5
COPS7A-216ENST00000543170 SYNE1Q8NF91 8797 aaKnown RBP5.68□□□□□ -1.5
COPS7A-216ENST00000543170 KRTAP9-6A8MVA2 160 aa5.67□□□□□ -1.5
COPS7A-216ENST00000543170 KRTAP20-2Q3LI61 65 aa5.67□□□□□ -1.5
COPS7A-216ENST00000543170 AHNAK2Q8IVF2 5795 aa5.62□□□□□ -1.51
COPS7A-216ENST00000543170 MT1AP04731 61 aa5.62□□□□□ -1.51
COPS7A-216ENST00000543170 PRAC1Q96KF2 57 aa5.56□□□□□ -1.52
COPS7A-216ENST00000543170 KRTAP6-1Q3LI64 71 aa5.53□□□□□ -1.52
COPS7A-216ENST00000543170 KRTAP5-3Q6L8H2 238 aa5.5□□□□□ -1.53
COPS7A-216ENST00000543170 KRTAP5-10Q6L8G5 202 aa5.45□□□□□ -1.54
COPS7A-216ENST00000543170 KTN1-AS1Q86SY8 53 aa5.42□□□□□ -1.54
COPS7A-216ENST00000543170 KRTAP9-4Q9BYQ2 154 aa5.38□□□□□ -1.55
COPS7A-216ENST00000543170 KRTAP5-2Q701N4 177 aa5.36□□□□□ -1.55
COPS7A-216ENST00000543170 KRTAP6-2Q3LI66 62 aa5.22□□□□□ -1.57
COPS7A-216ENST00000543170 KRTAP5-7Q6L8G8 165 aa5.21□□□□□ -1.58
COPS7A-216ENST00000543170 SVIPQ8NHG7 77 aa5.15□□□□□ -1.59
COPS7A-216ENST00000543170 MT3P25713 68 aa5.12□□□□□ -1.59
COPS7A-216ENST00000543170 KRTAP4-11Q9BYQ6 195 aa5.1□□□□□ -1.59
COPS7A-216ENST00000543170 OBSCNQ5VST9 7968 aa4.94□□□□□ -1.62
COPS7A-216ENST00000543170 KRTAP5-8O75690 187 aa4.93□□□□□ -1.62
COPS7A-216ENST00000543170 KRTAP5-1Q6L8H4 278 aa4.73□□□□□ -1.65
COPS7A-216ENST00000543170 LUZP6Q538Z0 58 aa4.71□□□□□ -1.66
COPS7A-216ENST00000543170 MUC5ACP98088 5654 aa4.68□□□□□ -1.66
COPS7A-216ENST00000543170 LCE1EQ5T753 118 aa4.66□□□□□ -1.66
COPS7A-216ENST00000543170 KRTAP9-9Q9BYP9 154 aa4.62□□□□□ -1.67
COPS7A-216ENST00000543170 MUC5BQ9HC84 5762 aaPredicted RBP4.61□□□□□ -1.67
COPS7A-216ENST00000543170 AHNAKQ09666 5890 aaKnown RBP4.53□□□□□ -1.68
COPS7A-216ENST00000543170 LCE3DQ9BYE3 92 aa4.4□□□□□ -1.71
COPS7A-216ENST00000543170 KRTAP4-2Q9BYR5 136 aa4.35□□□□□ -1.71
COPS7A-216ENST00000543170 LCE1CQ5T751 118 aa4.32□□□□□ -1.72
COPS7A-216ENST00000543170 LCE1BQ5T7P3 118 aa4.32□□□□□ -1.72
COPS7A-216ENST00000543170 LCE3EQ5T5B0 92 aa4.19□□□□□ -1.74
COPS7A-216ENST00000543170 NDUFAF8A1L188 74 aa4.04□□□□□ -1.76
COPS7A-216ENST00000543170 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.99□□□□□ -1.77
COPS7A-216ENST00000543170 KRTAP5-11Q6L8G4 156 aa3.9□□□□□ -1.79
COPS7A-216ENST00000543170 KRTAP4-12Q9BQ66 201 aa3.77□□□□□ -1.81
COPS7A-216ENST00000543170 LCE1FQ5T754 118 aa3.74□□□□□ -1.81
COPS7A-216ENST00000543170 KRTAP21-2Q3LI59 83 aa3.65□□□□□ -1.83
COPS7A-216ENST00000543170 A0A0A0MQY5 61 aa3.4□□□□□ -1.87
COPS7A-216ENST00000543170 INE1O15225 51 aa3.35□□□□□ -1.87
COPS7A-216ENST00000543170 PHGR1C9JFL3 82 aa3.34□□□□□ -1.87
COPS7A-216ENST00000543170 PRM1P04553 51 aa3.29□□□□□ -1.88
COPS7A-216ENST00000543170 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
COPS7A-216ENST00000543170 H3BS24 57 aa3.23□□□□□ -1.89
COPS7A-216ENST00000543170 MUC19Q7Z5P9 8384 aa3□□□□□ -1.93
COPS7A-216ENST00000543170 KRTAP21-1Q3LI58 79 aa2.41□□□□□ -2.02
COPS7A-216ENST00000543170 MUC16Q8WXI7 14507 aa2.22□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms