RNA–Protein interactions for RNA: ENST00000543058.1

MRPL48-211, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 3

Gene MRPL48, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-211ENST00000543058 M0R2T5 61 aa0.81□□□□□ -2.28
MRPL48-211ENST00000543058 MUC2Q02817 5179 aa0.81□□□□□ -2.28
MRPL48-211ENST00000543058 DNAH5Q8TE73 4624 aa0.81□□□□□ -2.28
MRPL48-211ENST00000543058 PKD1P98161 4303 aa0.8□□□□□ -2.28
MRPL48-211ENST00000543058 DNAH17Q9UFH2 4485 aa0.8□□□□□ -2.28
MRPL48-211ENST00000543058 C9orf92A6NGG3 77 aa0.8□□□□□ -2.28
MRPL48-211ENST00000543058 SPART-AS1P0CW21 52 aa0.8□□□□□ -2.28
MRPL48-211ENST00000543058 DMBT1Q9UGM3 2413 aaPredicted RBP0.8□□□□□ -2.28
MRPL48-211ENST00000543058 PKHD1P08F94 4074 aa0.8□□□□□ -2.28
MRPL48-211ENST00000543058 LRP2P98164 4655 aa0.78□□□□□ -2.28
MRPL48-211ENST00000543058 FAT4Q6V0I7 4981 aa0.78□□□□□ -2.28
MRPL48-211ENST00000543058 KRTAP5-10Q6L8G5 202 aa0.78□□□□□ -2.28
MRPL48-211ENST00000543058 SMR3BP02814 79 aaPredicted RBP0.77□□□□□ -2.29
MRPL48-211ENST00000543058 LRP1Q07954 4544 aaKnown RBP0.77□□□□□ -2.29
MRPL48-211ENST00000543058 DNAH6Q9C0G6 4158 aa0.76□□□□□ -2.29
MRPL48-211ENST00000543058 A0A096LPF7 62 aa0.76□□□□□ -2.29
MRPL48-211ENST00000543058 H3BNG1 76 aa0.76□□□□□ -2.29
MRPL48-211ENST00000543058 LINC01556Q5JQF7 62 aa0.76□□□□□ -2.29
MRPL48-211ENST00000543058 SRRM2Q9UQ35 2752 aaKnown RBP0.76□□□□□ -2.29
MRPL48-211ENST00000543058 FAT3Q8TDW7 4589 aa0.75□□□□□ -2.29
MRPL48-211ENST00000543058 MACF1Q9UPN3 7388 aaKnown RBP0.75□□□□□ -2.29
MRPL48-211ENST00000543058 KRTAP8-1Q8IUC2 63 aa0.74□□□□□ -2.29
MRPL48-211ENST00000543058 LPAP08519 4548 aa0.74□□□□□ -2.29
MRPL48-211ENST00000543058 VPS13BQ7Z7G8 4022 aa0.73□□□□□ -2.29
MRPL48-211ENST00000543058 AHNAKQ09666 5890 aaKnown RBP0.73□□□□□ -2.29
MRPL48-211ENST00000543058 SYNE2Q8WXH0 6885 aaKnown RBP0.73□□□□□ -2.29
MRPL48-211ENST00000543058 PKHD1L1Q86WI1 4243 aa0.72□□□□□ -2.29
MRPL48-211ENST00000543058 DEFB4AO15263 64 aa0.72□□□□□ -2.29
MRPL48-211ENST00000543058 MT1HL1P0DM35 61 aa0.72□□□□□ -2.29
MRPL48-211ENST00000543058 RPS29P62273 56 aaKnown RBP0.72□□□□□ -2.29
MRPL48-211ENST00000543058 PRM1P04553 51 aa0.71□□□□□ -2.3
MRPL48-211ENST00000543058 NEBP20929 6669 aa0.71□□□□□ -2.3
MRPL48-211ENST00000543058 MUC5BQ9HC84 5762 aaPredicted RBP0.71□□□□□ -2.3
MRPL48-211ENST00000543058 DNAH8Q96JB1 4490 aa0.7□□□□□ -2.3
MRPL48-211ENST00000543058 TNXBP22105 4242 aa0.7□□□□□ -2.3
MRPL48-211ENST00000543058 AHNAK2Q8IVF2 5795 aa0.7□□□□□ -2.3
MRPL48-211ENST00000543058 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
MRPL48-211ENST00000543058 GPR98Q8WXG9 6306 aa0.69□□□□□ -2.3
MRPL48-211ENST00000543058 USH2AO75445 5202 aa0.69□□□□□ -2.3
MRPL48-211ENST00000543058 HTN3P15516 51 aa0.68□□□□□ -2.3
MRPL48-211ENST00000543058 SSPOA2VEC9 5147 aa0.68□□□□□ -2.3
MRPL48-211ENST00000543058 KRTAP20-1Q3LI63 56 aa0.67□□□□□ -2.3
MRPL48-211ENST00000543058 KRTAP19-3Q7Z4W3 81 aa0.66□□□□□ -2.3
MRPL48-211ENST00000543058 MUC17Q685J3 4493 aa0.66□□□□□ -2.3
MRPL48-211ENST00000543058 MUC12Q9UKN1 5478 aa0.65□□□□□ -2.31
MRPL48-211ENST00000543058 KMT2DO14686 5537 aa0.64□□□□□ -2.31
MRPL48-211ENST00000543058 MT1HP80294 61 aa0.62□□□□□ -2.31
MRPL48-211ENST00000543058 KRTAP19-5Q3LI72 72 aa0.62□□□□□ -2.31
MRPL48-211ENST00000543058 DSTQ03001 7570 aaKnown RBP0.61□□□□□ -2.31
MRPL48-211ENST00000543058 MT1AP04731 61 aa0.61□□□□□ -2.31
MRPL48-211ENST00000543058 KRTAP19-2Q3LHN2 52 aa0.61□□□□□ -2.31
MRPL48-211ENST00000543058 MDN1Q9NU22 5596 aa0.59□□□□□ -2.31
MRPL48-211ENST00000543058 SPRR2DP22532 72 aa0.59□□□□□ -2.31
MRPL48-211ENST00000543058 FLGP20930 4061 aaPredicted RBP0.59□□□□□ -2.32
MRPL48-211ENST00000543058 SPRR2BP35325 72 aa0.58□□□□□ -2.32
MRPL48-211ENST00000543058 KRTAP19-6Q3LI70 58 aa0.58□□□□□ -2.32
MRPL48-211ENST00000543058 SPRR2AP35326 72 aa0.56□□□□□ -2.32
MRPL48-211ENST00000543058 KRTAP6-2Q3LI66 62 aa0.56□□□□□ -2.32
MRPL48-211ENST00000543058 MT2AP02795 61 aa0.55□□□□□ -2.32
MRPL48-211ENST00000543058 MT1FP04733 61 aa0.55□□□□□ -2.32
MRPL48-211ENST00000543058 KRTAP21-1Q3LI58 79 aa0.55□□□□□ -2.32
MRPL48-211ENST00000543058 SPRR2EP22531 72 aa0.54□□□□□ -2.32
MRPL48-211ENST00000543058 MUC5ACP98088 5654 aa0.53□□□□□ -2.32
MRPL48-211ENST00000543058 SPRR2FQ96RM1 72 aa0.53□□□□□ -2.32
MRPL48-211ENST00000543058 SYNE1Q8NF91 8797 aaKnown RBP0.5□□□□□ -2.33
MRPL48-211ENST00000543058 MT1EP04732 61 aa0.48□□□□□ -2.33
MRPL48-211ENST00000543058 MT4P47944 62 aa0.48□□□□□ -2.33
MRPL48-211ENST00000543058 MT1BP07438 61 aa0.46□□□□□ -2.34
MRPL48-211ENST00000543058 SPRR2GQ9BYE4 73 aa0.46□□□□□ -2.34
MRPL48-211ENST00000543058 MT1LQ93083 61 aa0.45□□□□□ -2.34
MRPL48-211ENST00000543058 KRTAP19-8Q3LI54 63 aa0.42□□□□□ -2.34
MRPL48-211ENST00000543058 MT1XP80297 61 aa0.4□□□□□ -2.35
MRPL48-211ENST00000543058 KRTAP20-2Q3LI61 65 aa0.4□□□□□ -2.35
MRPL48-211ENST00000543058 PHGR1C9JFL3 82 aa0.36□□□□□ -2.35
MRPL48-211ENST00000543058 KRTAP19-7Q3SYF9 63 aa0.36□□□□□ -2.35
MRPL48-211ENST00000543058 MT1GP13640 62 aa0.35□□□□□ -2.35
MRPL48-211ENST00000543058 MT1MQ8N339 61 aa0.35□□□□□ -2.35
MRPL48-211ENST00000543058 KRTAP6-1Q3LI64 71 aa0.3□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 10.8 ms