RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 KRTAP8-1Q8IUC2 63 aa3.94□□□□□ -1.78
TNFRSF1A-214ENST00000543048 SPRR2FQ96RM1 72 aa3.94□□□□□ -1.78
TNFRSF1A-214ENST00000543048 KRTAP20-1Q3LI63 56 aa3.93□□□□□ -1.78
TNFRSF1A-214ENST00000543048 BRK1Q8WUW1 75 aa3.93□□□□□ -1.78
TNFRSF1A-214ENST00000543048 PRO0628Q9UI54 55 aa3.92□□□□□ -1.78
TNFRSF1A-214ENST00000543048 KRTAP12-1P59990 96 aa3.9□□□□□ -1.79
TNFRSF1A-214ENST00000543048 K7ERS5 55 aa3.89□□□□□ -1.79
TNFRSF1A-214ENST00000543048 KRTAP10-12P60413 245 aa3.89□□□□□ -1.79
TNFRSF1A-214ENST00000543048 KRTAP5-11Q6L8G4 156 aa3.89□□□□□ -1.79
TNFRSF1A-214ENST00000543048 SPRR2EP22531 72 aa3.88□□□□□ -1.79
TNFRSF1A-214ENST00000543048 SPRR2BP35325 72 aa3.88□□□□□ -1.79
TNFRSF1A-214ENST00000543048 SPRR2AP35326 72 aa3.88□□□□□ -1.79
TNFRSF1A-214ENST00000543048 SPINT4Q6UDR6 99 aa3.87□□□□□ -1.79
TNFRSF1A-214ENST00000543048 KRTAP2-3P0C7H8 128 aa3.86□□□□□ -1.79
TNFRSF1A-214ENST00000543048 LCE1EQ5T753 118 aa3.86□□□□□ -1.79
TNFRSF1A-214ENST00000543048 KRTAP2-4Q9BYR9 128 aa3.86□□□□□ -1.79
TNFRSF1A-214ENST00000543048 CAMK2N1Q7Z7J9 78 aa3.83□□□□□ -1.8
TNFRSF1A-214ENST00000543048 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.77□□□□□ -1.81
TNFRSF1A-214ENST00000543048 SPRR2DP22532 72 aa3.75□□□□□ -1.81
TNFRSF1A-214ENST00000543048 KRTAP2-1Q9BYU5 128 aa3.74□□□□□ -1.81
TNFRSF1A-214ENST00000543048 PMAIP1Q13794 54 aa3.71□□□□□ -1.82
TNFRSF1A-214ENST00000543048 ROMO1P60602 79 aa3.68□□□□□ -1.82
TNFRSF1A-214ENST00000543048 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
TNFRSF1A-214ENST00000543048 C10orf95Q9H7T3 257 aa3.68□□□□□ -1.82
TNFRSF1A-214ENST00000543048 KRTAP19-7Q3SYF9 63 aa3.64□□□□□ -1.83
TNFRSF1A-214ENST00000543048 MT1EP04732 61 aa3.61□□□□□ -1.83
TNFRSF1A-214ENST00000543048 TNP1P09430 55 aa3.61□□□□□ -1.83
TNFRSF1A-214ENST00000543048 KRTAP25-1Q3LHN0 102 aa3.6□□□□□ -1.83
TNFRSF1A-214ENST00000543048 KRTAP19-3Q7Z4W3 81 aa3.58□□□□□ -1.84
TNFRSF1A-214ENST00000543048 KTN1-AS1Q86SY8 53 aa3.58□□□□□ -1.84
TNFRSF1A-214ENST00000543048 KRTAP19-5Q3LI72 72 aa3.57□□□□□ -1.84
TNFRSF1A-214ENST00000543048 MT1GP13640 62 aa3.53□□□□□ -1.84
TNFRSF1A-214ENST00000543048 NDUFAF8A1L188 74 aa3.51□□□□□ -1.85
TNFRSF1A-214ENST00000543048 PRAC1Q96KF2 57 aa3.5□□□□□ -1.85
TNFRSF1A-214ENST00000543048 LCE3AQ5TA76 89 aa3.49□□□□□ -1.85
TNFRSF1A-214ENST00000543048 PP632Q6XCG6 107 aa3.49□□□□□ -1.85
TNFRSF1A-214ENST00000543048 LCE3CQ5T5A8 94 aa3.48□□□□□ -1.85
TNFRSF1A-214ENST00000543048 DSTQ03001 7570 aaKnown RBP3.48□□□□□ -1.85
TNFRSF1A-214ENST00000543048 MT1LQ93083 61 aa3.45□□□□□ -1.86
TNFRSF1A-214ENST00000543048 KRTAP9-6A8MVA2 160 aa3.44□□□□□ -1.86
TNFRSF1A-214ENST00000543048 MT1MQ8N339 61 aa3.44□□□□□ -1.86
TNFRSF1A-214ENST00000543048 KRTAP12-3P60328 96 aa3.37□□□□□ -1.87
TNFRSF1A-214ENST00000543048 KRTAP4-3Q9BYR4 195 aa3.35□□□□□ -1.87
TNFRSF1A-214ENST00000543048 KRTAP5-1Q6L8H4 278 aa3.32□□□□□ -1.88
TNFRSF1A-214ENST00000543048 MT4P47944 62 aa3.28□□□□□ -1.88
TNFRSF1A-214ENST00000543048 KRTAP5-4Q6L8H1 288 aa3.26□□□□□ -1.89
TNFRSF1A-214ENST00000543048 HMCN1Q96RW7 5635 aa3.25□□□□□ -1.89
TNFRSF1A-214ENST00000543048 GPR98Q8WXG9 6306 aa3.24□□□□□ -1.89
TNFRSF1A-214ENST00000543048 LCE3EQ5T5B0 92 aa3.17□□□□□ -1.9
TNFRSF1A-214ENST00000543048 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
TNFRSF1A-214ENST00000543048 KRTAP5-5Q701N2 237 aaPredicted RBP3.14□□□□□ -1.91
TNFRSF1A-214ENST00000543048 AHNAK2Q8IVF2 5795 aa3.14□□□□□ -1.91
TNFRSF1A-214ENST00000543048 SPRR5A0A1B0GTR4 108 aa3.09□□□□□ -1.91
TNFRSF1A-214ENST00000543048 KRTAP12-4P60329 112 aa3.09□□□□□ -1.91
TNFRSF1A-214ENST00000543048 KRTAP20-2Q3LI61 65 aa3.08□□□□□ -1.92
TNFRSF1A-214ENST00000543048 KRTAP5-10Q6L8G5 202 aa3.06□□□□□ -1.92
TNFRSF1A-214ENST00000543048 OBSCNQ5VST9 7968 aa3.04□□□□□ -1.92
TNFRSF1A-214ENST00000543048 SYNE1Q8NF91 8797 aaKnown RBP3.01□□□□□ -1.93
TNFRSF1A-214ENST00000543048 KRTAP5-7Q6L8G8 165 aa2.95□□□□□ -1.94
TNFRSF1A-214ENST00000543048 MT1AP04731 61 aa2.94□□□□□ -1.94
TNFRSF1A-214ENST00000543048 KRTAP6-1Q3LI64 71 aa2.92□□□□□ -1.94
TNFRSF1A-214ENST00000543048 LUZP6Q538Z0 58 aa2.89□□□□□ -1.95
TNFRSF1A-214ENST00000543048 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
TNFRSF1A-214ENST00000543048 KRTAP6-2Q3LI66 62 aa2.79□□□□□ -1.96
TNFRSF1A-214ENST00000543048 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
TNFRSF1A-214ENST00000543048 MUC5BQ9HC84 5762 aaPredicted RBP2.59□□□□□ -2
TNFRSF1A-214ENST00000543048 LCE3DQ9BYE3 92 aa2.58□□□□□ -2
TNFRSF1A-214ENST00000543048 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
TNFRSF1A-214ENST00000543048 LCE1CQ5T751 118 aa2.55□□□□□ -2
TNFRSF1A-214ENST00000543048 LCE1BQ5T7P3 118 aa2.55□□□□□ -2
TNFRSF1A-214ENST00000543048 MUC5ACP98088 5654 aa2.54□□□□□ -2
TNFRSF1A-214ENST00000543048 INE1O15225 51 aa2.46□□□□□ -2.02
TNFRSF1A-214ENST00000543048 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
TNFRSF1A-214ENST00000543048 KRTAP21-2Q3LI59 83 aa1.93□□□□□ -2.1
TNFRSF1A-214ENST00000543048 PRM1P04553 51 aa1.91□□□□□ -2.1
TNFRSF1A-214ENST00000543048 PHGR1C9JFL3 82 aa1.78□□□□□ -2.12
TNFRSF1A-214ENST00000543048 KRTAP21-1Q3LI58 79 aa1.36□□□□□ -2.19
TNFRSF1A-214ENST00000543048 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 110.6 ms