RNA–Protein interactions for RNA: ENST00000541897.5

MSRB3-211, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 489 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-211ENST00000541897 KRTAP19-7Q3SYF9 63 aa7.85□□□□□ -1.15
MSRB3-211ENST00000541897 KRTAP23-1A1A580 65 aa7.81□□□□□ -1.16
MSRB3-211ENST00000541897 KRTAP19-5Q3LI72 72 aa7.78□□□□□ -1.16
MSRB3-211ENST00000541897 MT1EP04732 61 aa7.75□□□□□ -1.17
MSRB3-211ENST00000541897 LCE3BQ5TA77 95 aa7.74□□□□□ -1.17
MSRB3-211ENST00000541897 PP632Q6XCG6 107 aa7.63□□□□□ -1.19
MSRB3-211ENST00000541897 KRTAP12-3P60328 96 aa7.62□□□□□ -1.19
MSRB3-211ENST00000541897 KRTAP19-3Q7Z4W3 81 aa7.57□□□□□ -1.2
MSRB3-211ENST00000541897 PMAIP1Q13794 54 aa7.55□□□□□ -1.2
MSRB3-211ENST00000541897 PRO0628Q9UI54 55 aa7.54□□□□□ -1.2
MSRB3-211ENST00000541897 LCE5AQ5TCM9 118 aa7.53□□□□□ -1.2
MSRB3-211ENST00000541897 GPR98Q8WXG9 6306 aa7.52□□□□□ -1.21
MSRB3-211ENST00000541897 MT1LQ93083 61 aa7.51□□□□□ -1.21
MSRB3-211ENST00000541897 MT1GP13640 62 aa7.48□□□□□ -1.21
MSRB3-211ENST00000541897 DSTQ03001 7570 aaKnown RBP7.39□□□□□ -1.23
MSRB3-211ENST00000541897 KRTAP19-4Q3LI73 84 aa7.36□□□□□ -1.23
MSRB3-211ENST00000541897 KRTAP15-1Q3LI76 137 aa7.33□□□□□ -1.24
MSRB3-211ENST00000541897 MT1MQ8N339 61 aa7.33□□□□□ -1.24
MSRB3-211ENST00000541897 KRTAP4-9Q9BYQ8 210 aa7.32□□□□□ -1.24
MSRB3-211ENST00000541897 LCE1DQ5T752 114 aa7.12□□□□□ -1.27
MSRB3-211ENST00000541897 KRTAP4-7Q9BYR0 210 aa7.1□□□□□ -1.27
MSRB3-211ENST00000541897 LCE3CQ5T5A8 94 aa7.08□□□□□ -1.28
MSRB3-211ENST00000541897 KTN1-AS1Q86SY8 53 aa7.07□□□□□ -1.28
MSRB3-211ENST00000541897 PRAC1Q96KF2 57 aa7.07□□□□□ -1.28
MSRB3-211ENST00000541897 KRTAP4-3Q9BYR4 195 aa7.07□□□□□ -1.28
MSRB3-211ENST00000541897 MT4P47944 62 aa6.98□□□□□ -1.29
MSRB3-211ENST00000541897 HMCN1Q96RW7 5635 aa6.97□□□□□ -1.29
MSRB3-211ENST00000541897 LCE4AQ5TA78 99 aa6.96□□□□□ -1.3
MSRB3-211ENST00000541897 AHNAK2Q8IVF2 5795 aa6.89□□□□□ -1.31
MSRB3-211ENST00000541897 KRTAP5-10Q6L8G5 202 aa6.89□□□□□ -1.31
MSRB3-211ENST00000541897 KRTAP5-4Q6L8H1 288 aa6.78□□□□□ -1.32
MSRB3-211ENST00000541897 KRTAP4-6Q9BYQ5 205 aa6.76□□□□□ -1.33
MSRB3-211ENST00000541897 KRTAP5-7Q6L8G8 165 aa6.71□□□□□ -1.34
MSRB3-211ENST00000541897 LOC100996750A0A140TA64 210 aa6.7□□□□□ -1.34
MSRB3-211ENST00000541897 KRTAP5-5Q701N2 237 aaPredicted RBP6.7□□□□□ -1.34
MSRB3-211ENST00000541897 KRTAP9-6A8MVA2 160 aa6.63□□□□□ -1.35
MSRB3-211ENST00000541897 SVIPQ8NHG7 77 aa6.62□□□□□ -1.35
MSRB3-211ENST00000541897 KRTAP5-3Q6L8H2 238 aa6.6□□□□□ -1.35
MSRB3-211ENST00000541897 SPRR5A0A1B0GTR4 108 aa6.5□□□□□ -1.37
MSRB3-211ENST00000541897 KRTAP20-2Q3LI61 65 aa6.44□□□□□ -1.38
MSRB3-211ENST00000541897 MT1AP04731 61 aa6.41□□□□□ -1.38
MSRB3-211ENST00000541897 KRTAP12-4P60329 112 aa6.37□□□□□ -1.39
MSRB3-211ENST00000541897 KRTAP6-1Q3LI64 71 aa6.3□□□□□ -1.4
MSRB3-211ENST00000541897 SYNE1Q8NF91 8797 aaKnown RBP6.29□□□□□ -1.4
MSRB3-211ENST00000541897 KRTAP9-4Q9BYQ2 154 aa6.13□□□□□ -1.43
MSRB3-211ENST00000541897 KRTAP5-2Q701N4 177 aa5.97□□□□□ -1.45
MSRB3-211ENST00000541897 LUZP6Q538Z0 58 aa5.95□□□□□ -1.46
MSRB3-211ENST00000541897 KRTAP4-11Q9BYQ6 195 aa5.95□□□□□ -1.46
MSRB3-211ENST00000541897 KRTAP6-2Q3LI66 62 aa5.9□□□□□ -1.46
MSRB3-211ENST00000541897 MT3P25713 68 aa5.84□□□□□ -1.47
MSRB3-211ENST00000541897 MUC5ACP98088 5654 aa5.79□□□□□ -1.48
MSRB3-211ENST00000541897 AHNAKQ09666 5890 aaKnown RBP5.78□□□□□ -1.48
MSRB3-211ENST00000541897 KRTAP5-8O75690 187 aa5.77□□□□□ -1.49
MSRB3-211ENST00000541897 MUC5BQ9HC84 5762 aaPredicted RBP5.69□□□□□ -1.5
MSRB3-211ENST00000541897 OBSCNQ5VST9 7968 aa5.65□□□□□ -1.51
MSRB3-211ENST00000541897 KRTAP9-9Q9BYP9 154 aa5.57□□□□□ -1.52
MSRB3-211ENST00000541897 KRTAP5-1Q6L8H4 278 aa5.35□□□□□ -1.55
MSRB3-211ENST00000541897 NDUFAF8A1L188 74 aa5.31□□□□□ -1.56
MSRB3-211ENST00000541897 LCE1EQ5T753 118 aa5.27□□□□□ -1.57
MSRB3-211ENST00000541897 LCE3DQ9BYE3 92 aa5.22□□□□□ -1.57
MSRB3-211ENST00000541897 LCE3EQ5T5B0 92 aa5.01□□□□□ -1.61
MSRB3-211ENST00000541897 LCE1CQ5T751 118 aa4.88□□□□□ -1.63
MSRB3-211ENST00000541897 LCE1BQ5T7P3 118 aa4.88□□□□□ -1.63
MSRB3-211ENST00000541897 KRTAP4-2Q9BYR5 136 aa4.87□□□□□ -1.63
MSRB3-211ENST00000541897 A0A0A0MQY5 61 aa4.56□□□□□ -1.68
MSRB3-211ENST00000541897 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.54□□□□□ -1.68
MSRB3-211ENST00000541897 KRTAP4-12Q9BQ66 201 aa4.49□□□□□ -1.69
MSRB3-211ENST00000541897 INE1O15225 51 aa4.45□□□□□ -1.7
MSRB3-211ENST00000541897 KRTAP5-11Q6L8G4 156 aa4.36□□□□□ -1.71
MSRB3-211ENST00000541897 KRTAP21-2Q3LI59 83 aa4.17□□□□□ -1.74
MSRB3-211ENST00000541897 LCE1FQ5T754 118 aa4.15□□□□□ -1.75
MSRB3-211ENST00000541897 PRM1P04553 51 aa4.05□□□□□ -1.76
MSRB3-211ENST00000541897 PHGR1C9JFL3 82 aa4.04□□□□□ -1.76
MSRB3-211ENST00000541897 H3BS24 57 aa3.73□□□□□ -1.81
MSRB3-211ENST00000541897 KRTAP4-4Q9BYR3 166 aa3.64□□□□□ -1.83
MSRB3-211ENST00000541897 MUC19Q7Z5P9 8384 aa3.52□□□□□ -1.85
MSRB3-211ENST00000541897 KRTAP21-1Q3LI58 79 aa3.07□□□□□ -1.92
MSRB3-211ENST00000541897 MUC16Q8WXI7 14507 aa2.44□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 68.5 ms