RNA–Protein interactions for RNA: ENST00000541600.5

EPHA4-214, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 558 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-214ENST00000541600 KRTAP6-3Q3LI67 103 aa3.07□□□□□ -1.92
EPHA4-214ENST00000541600 KMT2DO14686 5537 aa3.06□□□□□ -1.92
EPHA4-214ENST00000541600 KRTAP20-1Q3LI63 56 aa3.06□□□□□ -1.92
EPHA4-214ENST00000541600 MDN1Q9NU22 5596 aa3.04□□□□□ -1.92
EPHA4-214ENST00000541600 C10orf95Q9H7T3 257 aa3.02□□□□□ -1.93
EPHA4-214ENST00000541600 PRO2289Q9P1D8 64 aa3□□□□□ -1.93
EPHA4-214ENST00000541600 PP632Q6XCG6 107 aa2.98□□□□□ -1.93
EPHA4-214ENST00000541600 SPRR2GQ9BYE4 73 aa2.92□□□□□ -1.94
EPHA4-214ENST00000541600 KRTAP19-6Q3LI70 58 aa2.88□□□□□ -1.95
EPHA4-214ENST00000541600 PLAC4Q8WY50 150 aa2.88□□□□□ -1.95
EPHA4-214ENST00000541600 TNP1P09430 55 aa2.86□□□□□ -1.95
EPHA4-214ENST00000541600 M0R2T5 61 aa2.84□□□□□ -1.95
EPHA4-214ENST00000541600 KRTAP2-3P0C7H8 128 aa2.84□□□□□ -1.95
EPHA4-214ENST00000541600 KRTAP10-5P60370 271 aa2.84□□□□□ -1.95
EPHA4-214ENST00000541600 KRTAP2-4Q9BYR9 128 aa2.84□□□□□ -1.95
EPHA4-214ENST00000541600 KRTAP19-8Q3LI54 63 aa2.82□□□□□ -1.96
EPHA4-214ENST00000541600 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
EPHA4-214ENST00000541600 MT2AP02795 61 aa2.8□□□□□ -1.96
EPHA4-214ENST00000541600 MT1FP04733 61 aa2.79□□□□□ -1.96
EPHA4-214ENST00000541600 SPRR5A0A1B0GTR4 108 aa2.78□□□□□ -1.96
EPHA4-214ENST00000541600 KRTAP10-7P60409 375 aaPredicted RBP2.78□□□□□ -1.96
EPHA4-214ENST00000541600 INE1O15225 51 aa2.77□□□□□ -1.97
EPHA4-214ENST00000541600 KRTAP10-10P60014 251 aa2.74□□□□□ -1.97
EPHA4-214ENST00000541600 KRTAP5-9P26371 169 aa2.73□□□□□ -1.97
EPHA4-214ENST00000541600 KRTAP2-1Q9BYU5 128 aa2.72□□□□□ -1.97
EPHA4-214ENST00000541600 MT1BP07438 61 aa2.71□□□□□ -1.98
EPHA4-214ENST00000541600 KRTAP8-1Q8IUC2 63 aa2.71□□□□□ -1.98
EPHA4-214ENST00000541600 LCE1EQ5T753 118 aa2.68□□□□□ -1.98
EPHA4-214ENST00000541600 DSTQ03001 7570 aaKnown RBP2.67□□□□□ -1.98
EPHA4-214ENST00000541600 MT1XP80297 61 aa2.67□□□□□ -1.98
EPHA4-214ENST00000541600 LCE3AQ5TA76 89 aa2.66□□□□□ -1.98
EPHA4-214ENST00000541600 KRTAP5-11Q6L8G4 156 aa2.65□□□□□ -1.99
EPHA4-214ENST00000541600 AHNAK2Q8IVF2 5795 aa2.62□□□□□ -1.99
EPHA4-214ENST00000541600 HMCN1Q96RW7 5635 aa2.6□□□□□ -1.99
EPHA4-214ENST00000541600 KRTAP12-3P60328 96 aa2.57□□□□□ -2
EPHA4-214ENST00000541600 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.57□□□□□ -2
EPHA4-214ENST00000541600 SPRR2EP22531 72 aa2.55□□□□□ -2
EPHA4-214ENST00000541600 SPRR2BP35325 72 aa2.55□□□□□ -2
EPHA4-214ENST00000541600 SPRR2AP35326 72 aa2.55□□□□□ -2
EPHA4-214ENST00000541600 KRTAP9-6A8MVA2 160 aa2.53□□□□□ -2
EPHA4-214ENST00000541600 KRTAP5-10Q6L8G5 202 aa2.5□□□□□ -2.01
EPHA4-214ENST00000541600 SPRR2FQ96RM1 72 aa2.47□□□□□ -2.01
EPHA4-214ENST00000541600 SPRR2DP22532 72 aa2.46□□□□□ -2.02
EPHA4-214ENST00000541600 LCE3DQ9BYE3 92 aa2.46□□□□□ -2.02
EPHA4-214ENST00000541600 KRTAP19-5Q3LI72 72 aa2.45□□□□□ -2.02
EPHA4-214ENST00000541600 KRTAP5-7Q6L8G8 165 aa2.44□□□□□ -2.02
EPHA4-214ENST00000541600 KRTAP19-7Q3SYF9 63 aa2.39□□□□□ -2.03
EPHA4-214ENST00000541600 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.03
EPHA4-214ENST00000541600 MT1EP04732 61 aa2.33□□□□□ -2.04
EPHA4-214ENST00000541600 MT1LQ93083 61 aa2.32□□□□□ -2.04
EPHA4-214ENST00000541600 KRTAP5-1Q6L8H4 278 aa2.26□□□□□ -2.05
EPHA4-214ENST00000541600 MT4P47944 62 aa2.25□□□□□ -2.05
EPHA4-214ENST00000541600 MUC5BQ9HC84 5762 aaPredicted RBP2.24□□□□□ -2.05
EPHA4-214ENST00000541600 MUC5ACP98088 5654 aa2.22□□□□□ -2.05
EPHA4-214ENST00000541600 MT1GP13640 62 aa2.22□□□□□ -2.05
EPHA4-214ENST00000541600 KRTAP19-3Q7Z4W3 81 aa2.19□□□□□ -2.06
EPHA4-214ENST00000541600 MT1MQ8N339 61 aa2.17□□□□□ -2.06
EPHA4-214ENST00000541600 KRTAP5-4Q6L8H1 288 aa2.14□□□□□ -2.07
EPHA4-214ENST00000541600 KRTAP4-4Q9BYR3 166 aa2.14□□□□□ -2.07
EPHA4-214ENST00000541600 KRTAP4-3Q9BYR4 195 aa2.08□□□□□ -2.08
EPHA4-214ENST00000541600 MT1AP04731 61 aa2.02□□□□□ -2.09
EPHA4-214ENST00000541600 KRTAP5-5Q701N2 237 aaPredicted RBP2.02□□□□□ -2.09
EPHA4-214ENST00000541600 KRTAP20-2Q3LI61 65 aa1.99□□□□□ -2.09
EPHA4-214ENST00000541600 KRTAP5-8O75690 187 aa1.98□□□□□ -2.09
EPHA4-214ENST00000541600 SYNE1Q8NF91 8797 aaKnown RBP1.97□□□□□ -2.09
EPHA4-214ENST00000541600 KRTAP12-4P60329 112 aa1.97□□□□□ -2.09
EPHA4-214ENST00000541600 OBSCNQ5VST9 7968 aa1.95□□□□□ -2.1
EPHA4-214ENST00000541600 KRTAP6-1Q3LI64 71 aa1.93□□□□□ -2.1
EPHA4-214ENST00000541600 KRTAP5-2Q701N4 177 aa1.84□□□□□ -2.11
EPHA4-214ENST00000541600 LCE1CQ5T751 118 aa1.83□□□□□ -2.12
EPHA4-214ENST00000541600 LCE1BQ5T7P3 118 aa1.83□□□□□ -2.12
EPHA4-214ENST00000541600 KRTAP6-2Q3LI66 62 aa1.72□□□□□ -2.13
EPHA4-214ENST00000541600 PRM1P04553 51 aa1.7□□□□□ -2.14
EPHA4-214ENST00000541600 PHGR1C9JFL3 82 aa1.42□□□□□ -2.18
EPHA4-214ENST00000541600 MUC19Q7Z5P9 8384 aa1.35□□□□□ -2.19
EPHA4-214ENST00000541600 KRTAP21-2Q3LI59 83 aa1.29□□□□□ -2.2
EPHA4-214ENST00000541600 KRTAP21-1Q3LI58 79 aa1.2□□□□□ -2.22
EPHA4-214ENST00000541600 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 41.3 ms