RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 MT4P47944 62 aa3.84□□□□□ -1.79
YBX3-211ENST00000541351 AHNAK2Q8IVF2 5795 aa3.84□□□□□ -1.8
YBX3-211ENST00000541351 Q5W150 140 aa3.8□□□□□ -1.8
YBX3-211ENST00000541351 KRTAP5-3Q6L8H2 238 aa3.76□□□□□ -1.81
YBX3-211ENST00000541351 KRTAP25-1Q3LHN0 102 aa3.75□□□□□ -1.81
YBX3-211ENST00000541351 KRTAP10-12P60413 245 aa3.73□□□□□ -1.81
YBX3-211ENST00000541351 ROMO1P60602 79 aa3.73□□□□□ -1.81
YBX3-211ENST00000541351 LCE5AQ5TCM9 118 aa3.72□□□□□ -1.81
YBX3-211ENST00000541351 H0YAA0 97 aa3.68□□□□□ -1.82
YBX3-211ENST00000541351 KRTAP10-7P60409 375 aaPredicted RBP3.68□□□□□ -1.82
YBX3-211ENST00000541351 K7ERS5 55 aa3.66□□□□□ -1.82
YBX3-211ENST00000541351 KRTAP19-3Q7Z4W3 81 aa3.65□□□□□ -1.83
YBX3-211ENST00000541351 A0A1B0GU33 70 aa3.62□□□□□ -1.83
YBX3-211ENST00000541351 KRTAP4-6Q9BYQ5 205 aa3.61□□□□□ -1.83
YBX3-211ENST00000541351 R4GN34 69 aa3.61□□□□□ -1.83
YBX3-211ENST00000541351 KRTAP5-4Q6L8H1 288 aa3.59□□□□□ -1.83
YBX3-211ENST00000541351 PP632Q6XCG6 107 aa3.59□□□□□ -1.83
YBX3-211ENST00000541351 P0C880 135 aa3.56□□□□□ -1.84
YBX3-211ENST00000541351 MT1GP13640 62 aa3.53□□□□□ -1.84
YBX3-211ENST00000541351 KRTAP15-1Q3LI76 137 aa3.52□□□□□ -1.85
YBX3-211ENST00000541351 MT1EP04732 61 aa3.51□□□□□ -1.85
YBX3-211ENST00000541351 M0QZ58 72 aa3.5□□□□□ -1.85
YBX3-211ENST00000541351 SPINT4Q6UDR6 99 aa3.5□□□□□ -1.85
YBX3-211ENST00000541351 KRTAP19-7Q3SYF9 63 aa3.47□□□□□ -1.85
YBX3-211ENST00000541351 KRTAP20-2Q3LI61 65 aa3.44□□□□□ -1.86
YBX3-211ENST00000541351 NDUFAF8A1L188 74 aa3.42□□□□□ -1.86
YBX3-211ENST00000541351 CAMK2N1Q7Z7J9 78 aa3.41□□□□□ -1.86
YBX3-211ENST00000541351 AHNAKQ09666 5890 aaKnown RBP3.41□□□□□ -1.86
YBX3-211ENST00000541351 MT1MQ8N339 61 aa3.39□□□□□ -1.87
YBX3-211ENST00000541351 KRTAP12-4P60329 112 aa3.36□□□□□ -1.87
YBX3-211ENST00000541351 MUC5ACP98088 5654 aa3.35□□□□□ -1.87
YBX3-211ENST00000541351 KRTAP4-11Q9BYQ6 195 aa3.32□□□□□ -1.88
YBX3-211ENST00000541351 KRTAP13-4Q3LI77 160 aa3.31□□□□□ -1.88
YBX3-211ENST00000541351 C10orf95Q9H7T3 257 aa3.31□□□□□ -1.88
YBX3-211ENST00000541351 A0A0D9SG42 100 aa3.3□□□□□ -1.88
YBX3-211ENST00000541351 LUZP6Q538Z0 58 aa3.28□□□□□ -1.88
YBX3-211ENST00000541351 KRTAP4-7Q9BYR0 210 aa3.28□□□□□ -1.88
YBX3-211ENST00000541351 MUC5BQ9HC84 5762 aaPredicted RBP3.27□□□□□ -1.89
YBX3-211ENST00000541351 KRTAP12-1P59990 96 aa3.25□□□□□ -1.89
YBX3-211ENST00000541351 KRTAP19-5Q3LI72 72 aa3.25□□□□□ -1.89
YBX3-211ENST00000541351 MT1LQ93083 61 aa3.25□□□□□ -1.89
YBX3-211ENST00000541351 KRTAP5-8O75690 187 aa3.23□□□□□ -1.89
YBX3-211ENST00000541351 KRTAP9-9Q9BYP9 154 aa3.23□□□□□ -1.89
YBX3-211ENST00000541351 KRTAP4-3Q9BYR4 195 aa3.23□□□□□ -1.89
YBX3-211ENST00000541351 KRTAP9-4Q9BYQ2 154 aa3.15□□□□□ -1.91
YBX3-211ENST00000541351 KRTAP5-5Q701N2 237 aaPredicted RBP3.14□□□□□ -1.91
YBX3-211ENST00000541351 SYNE1Q8NF91 8797 aaKnown RBP3.05□□□□□ -1.92
YBX3-211ENST00000541351 KRTAP5-2Q701N4 177 aa3.05□□□□□ -1.92
YBX3-211ENST00000541351 LOC100996750A0A140TA64 210 aa3.04□□□□□ -1.92
YBX3-211ENST00000541351 MT3P25713 68 aa3.02□□□□□ -1.93
YBX3-211ENST00000541351 KRTAP4-12Q9BQ66 201 aa2.96□□□□□ -1.94
YBX3-211ENST00000541351 OBSCNQ5VST9 7968 aa2.93□□□□□ -1.94
YBX3-211ENST00000541351 INE1O15225 51 aa2.92□□□□□ -1.94
YBX3-211ENST00000541351 LCE3AQ5TA76 89 aa2.9□□□□□ -1.95
YBX3-211ENST00000541351 TNP1P09430 55 aa2.89□□□□□ -1.95
YBX3-211ENST00000541351 KRTAP12-3P60328 96 aa2.82□□□□□ -1.96
YBX3-211ENST00000541351 KRTAP5-1Q6L8H4 278 aa2.82□□□□□ -1.96
YBX3-211ENST00000541351 MT1AP04731 61 aa2.78□□□□□ -1.96
YBX3-211ENST00000541351 KRTAP6-2Q3LI66 62 aa2.77□□□□□ -1.97
YBX3-211ENST00000541351 KRTAP6-1Q3LI64 71 aa2.75□□□□□ -1.97
YBX3-211ENST00000541351 LCE1EQ5T753 118 aa2.56□□□□□ -2
YBX3-211ENST00000541351 LCE1FQ5T754 118 aa2.54□□□□□ -2
YBX3-211ENST00000541351 LCE3CQ5T5A8 94 aa2.52□□□□□ -2.01
YBX3-211ENST00000541351 KRTAP4-2Q9BYR5 136 aa2.44□□□□□ -2.02
YBX3-211ENST00000541351 LCE1BQ5T7P3 118 aa2.43□□□□□ -2.02
YBX3-211ENST00000541351 PHGR1C9JFL3 82 aa2.39□□□□□ -2.03
YBX3-211ENST00000541351 LCE1CQ5T751 118 aa2.36□□□□□ -2.03
YBX3-211ENST00000541351 KRTAP5-11Q6L8G4 156 aa2.32□□□□□ -2.04
YBX3-211ENST00000541351 KRTAP9-6A8MVA2 160 aa2.27□□□□□ -2.05
YBX3-211ENST00000541351 LCE3EQ5T5B0 92 aa2.15□□□□□ -2.07
YBX3-211ENST00000541351 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.06□□□□□ -2.08
YBX3-211ENST00000541351 LCE3DQ9BYE3 92 aa1.93□□□□□ -2.1
YBX3-211ENST00000541351 PRM1P04553 51 aa1.88□□□□□ -2.11
YBX3-211ENST00000541351 MUC19Q7Z5P9 8384 aa1.87□□□□□ -2.11
YBX3-211ENST00000541351 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
YBX3-211ENST00000541351 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
YBX3-211ENST00000541351 KRTAP4-4Q9BYR3 166 aa1.72□□□□□ -2.13
YBX3-211ENST00000541351 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 152.8 ms