RNA–Protein interactions for RNA: ENST00000541097.5

LDHA-219, Transcript of lactate dehydrogenase A, humanhuman

TSL 3

Gene LDHA, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-219ENST00000541097 MUC12Q9UKN1 5478 aa2.88□□□□□ -1.95
LDHA-219ENST00000541097 M0QZ58 72 aa2.86□□□□□ -1.95
LDHA-219ENST00000541097 MT1XP80297 61 aa2.86□□□□□ -1.95
LDHA-219ENST00000541097 PRO2289Q9P1D8 64 aa2.86□□□□□ -1.95
LDHA-219ENST00000541097 R4GN34 69 aa2.86□□□□□ -1.95
LDHA-219ENST00000541097 NEBP20929 6669 aa2.86□□□□□ -1.95
LDHA-219ENST00000541097 KMT2DO14686 5537 aa2.85□□□□□ -1.95
LDHA-219ENST00000541097 PLAC4Q8WY50 150 aa2.85□□□□□ -1.95
LDHA-219ENST00000541097 MT3P25713 68 aa2.84□□□□□ -1.95
LDHA-219ENST00000541097 MDN1Q9NU22 5596 aa2.82□□□□□ -1.96
LDHA-219ENST00000541097 KRTAP12-1P59990 96 aa2.82□□□□□ -1.96
LDHA-219ENST00000541097 KRTAP12-2P59991 146 aa2.82□□□□□ -1.96
LDHA-219ENST00000541097 SPINT4Q6UDR6 99 aa2.79□□□□□ -1.96
LDHA-219ENST00000541097 KRTAP20-1Q3LI63 56 aa2.77□□□□□ -1.97
LDHA-219ENST00000541097 KRTAP8-1Q8IUC2 63 aa2.75□□□□□ -1.97
LDHA-219ENST00000541097 SPRR2FQ96RM1 72 aa2.75□□□□□ -1.97
LDHA-219ENST00000541097 C10orf95Q9H7T3 257 aa2.75□□□□□ -1.97
LDHA-219ENST00000541097 KRTAP2-3P0C7H8 128 aa2.74□□□□□ -1.97
LDHA-219ENST00000541097 KRTAP10-12P60413 245 aa2.74□□□□□ -1.97
LDHA-219ENST00000541097 KRTAP2-4Q9BYR9 128 aa2.74□□□□□ -1.97
LDHA-219ENST00000541097 SPRR2EP22531 72 aa2.71□□□□□ -1.98
LDHA-219ENST00000541097 SPRR2BP35325 72 aa2.71□□□□□ -1.98
LDHA-219ENST00000541097 SPRR2AP35326 72 aa2.71□□□□□ -1.98
LDHA-219ENST00000541097 KRTAP5-1Q6L8H4 278 aa2.7□□□□□ -1.98
LDHA-219ENST00000541097 KRTAP2-1Q9BYU5 128 aa2.65□□□□□ -1.99
LDHA-219ENST00000541097 SPRR2DP22532 72 aa2.62□□□□□ -1.99
LDHA-219ENST00000541097 PP632Q6XCG6 107 aa2.62□□□□□ -1.99
LDHA-219ENST00000541097 NDUFAF8A1L188 74 aa2.61□□□□□ -1.99
LDHA-219ENST00000541097 KRTAP5-4Q6L8H1 288 aa2.61□□□□□ -1.99
LDHA-219ENST00000541097 CAMK2N1Q7Z7J9 78 aa2.61□□□□□ -1.99
LDHA-219ENST00000541097 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -1.99
LDHA-219ENST00000541097 KRTAP19-7Q3SYF9 63 aa2.57□□□□□ -2
LDHA-219ENST00000541097 KRTAP9-6A8MVA2 160 aa2.54□□□□□ -2
LDHA-219ENST00000541097 MT1EP04732 61 aa2.54□□□□□ -2
LDHA-219ENST00000541097 TNP1P09430 55 aa2.53□□□□□ -2
LDHA-219ENST00000541097 KRTAP19-3Q7Z4W3 81 aa2.52□□□□□ -2.01
LDHA-219ENST00000541097 DSTQ03001 7570 aaKnown RBP2.48□□□□□ -2.01
LDHA-219ENST00000541097 MT1GP13640 62 aa2.48□□□□□ -2.01
LDHA-219ENST00000541097 KRTAP19-5Q3LI72 72 aa2.47□□□□□ -2.01
LDHA-219ENST00000541097 LUZP6Q538Z0 58 aa2.45□□□□□ -2.02
LDHA-219ENST00000541097 SPRR5A0A1B0GTR4 108 aa2.42□□□□□ -2.02
LDHA-219ENST00000541097 MT1LQ93083 61 aa2.42□□□□□ -2.02
LDHA-219ENST00000541097 MT1MQ8N339 61 aa2.41□□□□□ -2.02
LDHA-219ENST00000541097 LCE3AQ5TA76 89 aa2.4□□□□□ -2.03
LDHA-219ENST00000541097 LCE1FQ5T754 118 aa2.39□□□□□ -2.03
LDHA-219ENST00000541097 OBSCNQ5VST9 7968 aa2.36□□□□□ -2.03
LDHA-219ENST00000541097 KRTAP12-3P60328 96 aa2.33□□□□□ -2.04
LDHA-219ENST00000541097 KRTAP4-3Q9BYR4 195 aa2.33□□□□□ -2.04
LDHA-219ENST00000541097 GPR98Q8WXG9 6306 aa2.29□□□□□ -2.04
LDHA-219ENST00000541097 LCE3CQ5T5A8 94 aa2.29□□□□□ -2.04
LDHA-219ENST00000541097 MT4P47944 62 aa2.28□□□□□ -2.04
LDHA-219ENST00000541097 HMCN1Q96RW7 5635 aa2.28□□□□□ -2.04
LDHA-219ENST00000541097 KRTAP5-5Q701N2 237 aaPredicted RBP2.25□□□□□ -2.05
LDHA-219ENST00000541097 KRTAP5-10Q6L8G5 202 aa2.2□□□□□ -2.06
LDHA-219ENST00000541097 KRTAP20-2Q3LI61 65 aa2.18□□□□□ -2.06
LDHA-219ENST00000541097 AHNAK2Q8IVF2 5795 aa2.17□□□□□ -2.06
LDHA-219ENST00000541097 KRTAP12-4P60329 112 aa2.16□□□□□ -2.06
LDHA-219ENST00000541097 INE1O15225 51 aa2.15□□□□□ -2.07
LDHA-219ENST00000541097 KRTAP5-2Q701N4 177 aa2.15□□□□□ -2.07
LDHA-219ENST00000541097 SYNE1Q8NF91 8797 aaKnown RBP2.13□□□□□ -2.07
LDHA-219ENST00000541097 KRTAP5-7Q6L8G8 165 aa2.12□□□□□ -2.07
LDHA-219ENST00000541097 LCE3EQ5T5B0 92 aa2.07□□□□□ -2.08
LDHA-219ENST00000541097 MT1AP04731 61 aa2.06□□□□□ -2.08
LDHA-219ENST00000541097 KRTAP6-1Q3LI64 71 aa2.04□□□□□ -2.08
LDHA-219ENST00000541097 KRTAP6-2Q3LI66 62 aa1.95□□□□□ -2.1
LDHA-219ENST00000541097 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
LDHA-219ENST00000541097 LCE1CQ5T751 118 aa1.93□□□□□ -2.1
LDHA-219ENST00000541097 LCE1BQ5T7P3 118 aa1.93□□□□□ -2.1
LDHA-219ENST00000541097 MUC5ACP98088 5654 aa1.81□□□□□ -2.12
LDHA-219ENST00000541097 MUC5BQ9HC84 5762 aaPredicted RBP1.8□□□□□ -2.12
LDHA-219ENST00000541097 AHNAKQ09666 5890 aaKnown RBP1.79□□□□□ -2.12
LDHA-219ENST00000541097 LCE3DQ9BYE3 92 aa1.66□□□□□ -2.14
LDHA-219ENST00000541097 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
LDHA-219ENST00000541097 PRM1P04553 51 aa1.54□□□□□ -2.16
LDHA-219ENST00000541097 KRTAP21-2Q3LI59 83 aa1.37□□□□□ -2.19
LDHA-219ENST00000541097 PHGR1C9JFL3 82 aa1.28□□□□□ -2.2
LDHA-219ENST00000541097 KRTAP21-1Q3LI58 79 aa0.99□□□□□ -2.25
LDHA-219ENST00000541097 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 11.9 ms