RNA–Protein interactions for RNA: ENST00000540977.1

RFXANK-208, Transcript of regulatory factor X associated ankyrin containing protein, human

TSL 2

Gene RFXANK, Length 389 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFXANK-208	ENST00000540977	SPRR2D	P22532	72 aa		4.47	□□□□□ -1.69
RFXANK-208	ENST00000540977	KRTAP10-12	P60413	245 aa		4.46	□□□□□ -1.7
RFXANK-208	ENST00000540977	KRTAP23-1	A1A580	65 aa		4.44	□□□□□ -1.7
RFXANK-208	ENST00000540977	KRTAP10-7	P60409	375 aa	Predicted RBP	4.41	□□□□□ -1.7
RFXANK-208	ENST00000540977	LCE3B	Q5TA77	95 aa		4.37	□□□□□ -1.71
RFXANK-208	ENST00000540977	LCE3A	Q5TA76	89 aa		4.36	□□□□□ -1.71
RFXANK-208	ENST00000540977	KRTAP4-8	A0A0G2JLE6	195 aa		4.31	□□□□□ -1.72
RFXANK-208	ENST00000540977	KRTAP4-8	Q9BYQ9	185 aa		4.31	□□□□□ -1.72
RFXANK-208	ENST00000540977	KRTAP12-3	P60328	96 aa		4.22	□□□□□ -1.73
RFXANK-208	ENST00000540977	KRTAP19-5	Q3LI72	72 aa		4.18	□□□□□ -1.74
RFXANK-208	ENST00000540977	KRTAP15-1	Q3LI76	137 aa		4.14	□□□□□ -1.75
RFXANK-208	ENST00000540977	GPR98	Q8WXG9	6306 aa		4.14	□□□□□ -1.75
RFXANK-208	ENST00000540977	DST	Q03001	7570 aa	Known RBP	4.11	□□□□□ -1.75
RFXANK-208	ENST00000540977	LCE5A	Q5TCM9	118 aa		4.09	□□□□□ -1.75
RFXANK-208	ENST00000540977	KRTAP19-7	Q3SYF9	63 aa		4.07	□□□□□ -1.76
RFXANK-208	ENST00000540977	KRTAP4-9	Q9BYQ8	210 aa		4.06	□□□□□ -1.76
RFXANK-208	ENST00000540977	KRTAP19-3	Q7Z4W3	81 aa		4.05	□□□□□ -1.76
RFXANK-208	ENST00000540977	MT1E	P04732	61 aa		4.04	□□□□□ -1.76
RFXANK-208	ENST00000540977	KRTAP19-4	Q3LI73	84 aa		4.02	□□□□□ -1.77
RFXANK-208	ENST00000540977		H3BS24	57 aa		3.99	□□□□□ -1.77
RFXANK-208	ENST00000540977	LCE1D	Q5T752	114 aa		3.99	□□□□□ -1.77
RFXANK-208	ENST00000540977	LCE4A	Q5TA78	99 aa		3.99	□□□□□ -1.77
RFXANK-208	ENST00000540977	NDUFAF8	A1L188	74 aa		3.96	□□□□□ -1.78
RFXANK-208	ENST00000540977	MT1L	Q93083	61 aa		3.96	□□□□□ -1.78
RFXANK-208	ENST00000540977	MT1G	P13640	62 aa		3.95	□□□□□ -1.78
RFXANK-208	ENST00000540977	LUZP6	Q538Z0	58 aa		3.92	□□□□□ -1.78
RFXANK-208	ENST00000540977	LCE3C	Q5T5A8	94 aa		3.92	□□□□□ -1.78
RFXANK-208	ENST00000540977	MT4	P47944	62 aa		3.89	□□□□□ -1.79
RFXANK-208	ENST00000540977	HMCN1	Q96RW7	5635 aa		3.89	□□□□□ -1.79
RFXANK-208	ENST00000540977	KRTAP5-10	Q6L8G5	202 aa		3.86	□□□□□ -1.79
RFXANK-208	ENST00000540977	KRTAP5-4	Q6L8H1	288 aa		3.83	□□□□□ -1.8
RFXANK-208	ENST00000540977	MT1M	Q8N339	61 aa		3.83	□□□□□ -1.8
RFXANK-208	ENST00000540977	SPRR5	A0A1B0GTR4	108 aa		3.8	□□□□□ -1.8
RFXANK-208	ENST00000540977	KRTAP5-7	Q6L8G8	165 aa		3.78	□□□□□ -1.8
RFXANK-208	ENST00000540977	KRTAP4-7	Q9BYR0	210 aa		3.77	□□□□□ -1.81
RFXANK-208	ENST00000540977	AHNAK2	Q8IVF2	5795 aa		3.76	□□□□□ -1.81
RFXANK-208	ENST00000540977	KRTAP4-6	Q9BYQ5	205 aa		3.73	□□□□□ -1.81
RFXANK-208	ENST00000540977	KRTAP5-3	Q6L8H2	238 aa		3.71	□□□□□ -1.82
RFXANK-208	ENST00000540977	KRTAP4-3	Q9BYR4	195 aa		3.69	□□□□□ -1.82
RFXANK-208	ENST00000540977		A0A0A0MQY5	61 aa		3.64	□□□□□ -1.83
RFXANK-208	ENST00000540977	KRTAP20-2	Q3LI61	65 aa		3.61	□□□□□ -1.83
RFXANK-208	ENST00000540977	KRTAP12-4	P60329	112 aa		3.58	□□□□□ -1.84
RFXANK-208	ENST00000540977	KRTAP9-6	A8MVA2	160 aa		3.56	□□□□□ -1.84
RFXANK-208	ENST00000540977	LOC100996750	A0A140TA64	210 aa		3.55	□□□□□ -1.84
RFXANK-208	ENST00000540977	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.54	□□□□□ -1.84
RFXANK-208	ENST00000540977	MT1A	P04731	61 aa		3.4	□□□□□ -1.87
RFXANK-208	ENST00000540977	KRTAP4-11	Q9BYQ6	195 aa		3.38	□□□□□ -1.87
RFXANK-208	ENST00000540977	INE1	O15225	51 aa		3.34	□□□□□ -1.87
RFXANK-208	ENST00000540977	KRTAP6-1	Q3LI64	71 aa		3.32	□□□□□ -1.88
RFXANK-208	ENST00000540977	SYNE1	Q8NF91	8797 aa	Known RBP	3.31	□□□□□ -1.88
RFXANK-208	ENST00000540977	KRTAP5-2	Q701N4	177 aa		3.3	□□□□□ -1.88
RFXANK-208	ENST00000540977	KRTAP5-8	O75690	187 aa		3.25	□□□□□ -1.89
RFXANK-208	ENST00000540977	KRTAP9-4	Q9BYQ2	154 aa		3.23	□□□□□ -1.89
RFXANK-208	ENST00000540977	MUC5AC	P98088	5654 aa		3.19	□□□□□ -1.9
RFXANK-208	ENST00000540977	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.18	□□□□□ -1.9
RFXANK-208	ENST00000540977	KRTAP9-9	Q9BYP9	154 aa		3.18	□□□□□ -1.9
RFXANK-208	ENST00000540977	AHNAK	Q09666	5890 aa	Known RBP	3.17	□□□□□ -1.9
RFXANK-208	ENST00000540977	MT3	P25713	68 aa		3.13	□□□□□ -1.91
RFXANK-208	ENST00000540977	KRTAP6-2	Q3LI66	62 aa		3.09	□□□□□ -1.91
RFXANK-208	ENST00000540977	OBSCN	Q5VST9	7968 aa		3.08	□□□□□ -1.92
RFXANK-208	ENST00000540977	KRTAP5-1	Q6L8H4	278 aa		3	□□□□□ -1.93
RFXANK-208	ENST00000540977	LCE3D	Q9BYE3	92 aa		2.97	□□□□□ -1.93
RFXANK-208	ENST00000540977	LCE3E	Q5T5B0	92 aa		2.9	□□□□□ -1.95
RFXANK-208	ENST00000540977	LCE1E	Q5T753	118 aa		2.84	□□□□□ -1.95
RFXANK-208	ENST00000540977	LCE1C	Q5T751	118 aa		2.63	□□□□□ -1.99
RFXANK-208	ENST00000540977	LCE1B	Q5T7P3	118 aa		2.63	□□□□□ -1.99
RFXANK-208	ENST00000540977	KRTAP4-2	Q9BYR5	136 aa		2.63	□□□□□ -1.99
RFXANK-208	ENST00000540977	PRM1	P04553	51 aa		2.48	□□□□□ -2.01
RFXANK-208	ENST00000540977	LCE1F	Q5T754	118 aa		2.44	□□□□□ -2.02
RFXANK-208	ENST00000540977	KRTAP4-12	Q9BQ66	201 aa		2.42	□□□□□ -2.02
RFXANK-208	ENST00000540977	KRTAP5-11	Q6L8G4	156 aa		2.4	□□□□□ -2.03
RFXANK-208	ENST00000540977	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.36	□□□□□ -2.03
RFXANK-208	ENST00000540977	PHGR1	C9JFL3	82 aa		2.26	□□□□□ -2.05
RFXANK-208	ENST00000540977	KRTAP21-2	Q3LI59	83 aa		2.13	□□□□□ -2.07
RFXANK-208	ENST00000540977	KRTAP4-4	Q9BYR3	166 aa		1.95	□□□□□ -2.1
RFXANK-208	ENST00000540977	MUC19	Q7Z5P9	8384 aa		1.89	□□□□□ -2.11
RFXANK-208	ENST00000540977	KRTAP21-1	Q3LI58	79 aa		1.77	□□□□□ -2.13
RFXANK-208	ENST00000540977	MUC16	Q8WXI7	14507 aa		1.34	□□□□□ -2.2

Retrieved 78 of 20,778 RNA–protein pairs in 137 ms