RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 SPRR2EP22531 72 aa5.39□□□□□ -1.55
CYB561A3-216ENST00000540755 SPRR2BP35325 72 aa5.39□□□□□ -1.55
CYB561A3-216ENST00000540755 SPRR2AP35326 72 aa5.39□□□□□ -1.55
CYB561A3-216ENST00000540755 KRTAP15-1Q3LI76 137 aa5.35□□□□□ -1.55
CYB561A3-216ENST00000540755 LCE1AQ5T7P2 110 aa5.34□□□□□ -1.55
CYB561A3-216ENST00000540755 KRTAP12-3P60328 96 aa5.32□□□□□ -1.56
CYB561A3-216ENST00000540755 KRTAP19-5Q3LI72 72 aa5.32□□□□□ -1.56
CYB561A3-216ENST00000540755 KRTAP19-7Q3SYF9 63 aa5.27□□□□□ -1.57
CYB561A3-216ENST00000540755 KRTAP2-2Q9BYT5 123 aa5.24□□□□□ -1.57
CYB561A3-216ENST00000540755 KRTAP2-1Q9BYU5 128 aa5.24□□□□□ -1.57
CYB561A3-216ENST00000540755 SPRR2DP22532 72 aa5.22□□□□□ -1.57
CYB561A3-216ENST00000540755 MT1EP04732 61 aa5.19□□□□□ -1.58
CYB561A3-216ENST00000540755 KRTAP19-4Q3LI73 84 aa5.19□□□□□ -1.58
CYB561A3-216ENST00000540755 SPRR5A0A1B0GTR4 108 aa5.15□□□□□ -1.58
CYB561A3-216ENST00000540755 LUZP6Q538Z0 58 aa5.11□□□□□ -1.59
CYB561A3-216ENST00000540755 LCE3BQ5TA77 95 aa5.08□□□□□ -1.6
CYB561A3-216ENST00000540755 MT1LQ93083 61 aa5.07□□□□□ -1.6
CYB561A3-216ENST00000540755 GPR98Q8WXG9 6306 aa5.02□□□□□ -1.61
CYB561A3-216ENST00000540755 KRTAP19-3Q7Z4W3 81 aa5□□□□□ -1.61
CYB561A3-216ENST00000540755 LCE3CQ5T5A8 94 aa4.98□□□□□ -1.61
CYB561A3-216ENST00000540755 NDUFAF8A1L188 74 aa4.96□□□□□ -1.62
CYB561A3-216ENST00000540755 MT1GP13640 62 aa4.95□□□□□ -1.62
CYB561A3-216ENST00000540755 DSTQ03001 7570 aaKnown RBP4.94□□□□□ -1.62
CYB561A3-216ENST00000540755 LCE5AQ5TCM9 118 aa4.92□□□□□ -1.62
CYB561A3-216ENST00000540755 MT1MQ8N339 61 aa4.88□□□□□ -1.63
CYB561A3-216ENST00000540755 KRTAP4-7Q9BYR0 210 aa4.87□□□□□ -1.63
CYB561A3-216ENST00000540755 KRTAP4-9Q9BYQ8 210 aa4.8□□□□□ -1.64
CYB561A3-216ENST00000540755 KRTAP4-3Q9BYR4 195 aa4.75□□□□□ -1.65
CYB561A3-216ENST00000540755 KRTAP9-6A8MVA2 160 aa4.69□□□□□ -1.66
CYB561A3-216ENST00000540755 HMCN1Q96RW7 5635 aa4.69□□□□□ -1.66
CYB561A3-216ENST00000540755 LCE1DQ5T752 114 aa4.68□□□□□ -1.66
CYB561A3-216ENST00000540755 LCE4AQ5TA78 99 aa4.59□□□□□ -1.67
CYB561A3-216ENST00000540755 AHNAK2Q8IVF2 5795 aa4.59□□□□□ -1.67
CYB561A3-216ENST00000540755 MT4P47944 62 aa4.58□□□□□ -1.68
CYB561A3-216ENST00000540755 LOC100996750A0A140TA64 210 aa4.57□□□□□ -1.68
CYB561A3-216ENST00000540755 H3BS24 57 aa4.57□□□□□ -1.68
CYB561A3-216ENST00000540755 A0A0A0MQY5 61 aa4.54□□□□□ -1.68
CYB561A3-216ENST00000540755 KRTAP5-4Q6L8H1 288 aa4.53□□□□□ -1.68
CYB561A3-216ENST00000540755 KRTAP4-6Q9BYQ5 205 aa4.46□□□□□ -1.7
CYB561A3-216ENST00000540755 KRTAP5-10Q6L8G5 202 aa4.45□□□□□ -1.7
CYB561A3-216ENST00000540755 KRTAP5-5Q701N2 237 aaPredicted RBP4.43□□□□□ -1.7
CYB561A3-216ENST00000540755 MT1AP04731 61 aa4.32□□□□□ -1.72
CYB561A3-216ENST00000540755 KRTAP5-7Q6L8G8 165 aa4.3□□□□□ -1.72
CYB561A3-216ENST00000540755 KRTAP5-3Q6L8H2 238 aa4.3□□□□□ -1.72
CYB561A3-216ENST00000540755 KRTAP20-2Q3LI61 65 aa4.27□□□□□ -1.73
CYB561A3-216ENST00000540755 INE1O15225 51 aa4.26□□□□□ -1.73
CYB561A3-216ENST00000540755 KRTAP6-1Q3LI64 71 aa4.26□□□□□ -1.73
CYB561A3-216ENST00000540755 SYNE1Q8NF91 8797 aaKnown RBP4.17□□□□□ -1.74
CYB561A3-216ENST00000540755 KRTAP12-4P60329 112 aa4.13□□□□□ -1.75
CYB561A3-216ENST00000540755 KRTAP9-4Q9BYQ2 154 aa4.11□□□□□ -1.75
CYB561A3-216ENST00000540755 KRTAP5-2Q701N4 177 aa3.95□□□□□ -1.78
CYB561A3-216ENST00000540755 KRTAP4-11Q9BYQ6 195 aa3.93□□□□□ -1.78
CYB561A3-216ENST00000540755 KRTAP6-2Q3LI66 62 aa3.92□□□□□ -1.78
CYB561A3-216ENST00000540755 MT3P25713 68 aa3.92□□□□□ -1.78
CYB561A3-216ENST00000540755 AHNAKQ09666 5890 aaKnown RBP3.85□□□□□ -1.79
CYB561A3-216ENST00000540755 MUC5ACP98088 5654 aa3.83□□□□□ -1.8
CYB561A3-216ENST00000540755 KRTAP5-8O75690 187 aa3.82□□□□□ -1.8
CYB561A3-216ENST00000540755 MUC5BQ9HC84 5762 aaPredicted RBP3.79□□□□□ -1.8
CYB561A3-216ENST00000540755 LCE3DQ9BYE3 92 aa3.76□□□□□ -1.81
CYB561A3-216ENST00000540755 OBSCNQ5VST9 7968 aa3.75□□□□□ -1.81
CYB561A3-216ENST00000540755 LCE3EQ5T5B0 92 aa3.68□□□□□ -1.82
CYB561A3-216ENST00000540755 KRTAP9-9Q9BYP9 154 aa3.6□□□□□ -1.83
CYB561A3-216ENST00000540755 KRTAP5-1Q6L8H4 278 aa3.57□□□□□ -1.84
CYB561A3-216ENST00000540755 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
CYB561A3-216ENST00000540755 PRM1P04553 51 aa3.2□□□□□ -1.9
CYB561A3-216ENST00000540755 KRTAP4-2Q9BYR5 136 aa3.2□□□□□ -1.9
CYB561A3-216ENST00000540755 LCE1CQ5T751 118 aa3.19□□□□□ -1.9
CYB561A3-216ENST00000540755 LCE1BQ5T7P3 118 aa3.19□□□□□ -1.9
CYB561A3-216ENST00000540755 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.99□□□□□ -1.93
CYB561A3-216ENST00000540755 KRTAP4-12Q9BQ66 201 aa2.93□□□□□ -1.94
CYB561A3-216ENST00000540755 KRTAP5-11Q6L8G4 156 aa2.83□□□□□ -1.96
CYB561A3-216ENST00000540755 KRTAP21-2Q3LI59 83 aa2.8□□□□□ -1.96
CYB561A3-216ENST00000540755 LCE1FQ5T754 118 aa2.75□□□□□ -1.97
CYB561A3-216ENST00000540755 PHGR1C9JFL3 82 aa2.57□□□□□ -2
CYB561A3-216ENST00000540755 KRTAP4-4Q9BYR3 166 aa2.45□□□□□ -2.02
CYB561A3-216ENST00000540755 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
CYB561A3-216ENST00000540755 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
CYB561A3-216ENST00000540755 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 10.5 ms