RNA–Protein interactions for RNA: ENST00000540712.1

LRR1-203, Transcript of leucine rich repeat protein 1, humanhuman

TSL 1 (best)

Gene LRR1, Length 1,597 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRR1-203ENST00000540712 CDC42SE1Q9NRR8 79 aa5.88□□□□□ -1.47
LRR1-203ENST00000540712 KRTAP19-4Q3LI73 84 aa5.87□□□□□ -1.47
LRR1-203ENST00000540712 C10orf95Q9H7T3 257 aa5.86□□□□□ -1.47
LRR1-203ENST00000540712 TNP1P09430 55 aa5.85□□□□□ -1.47
LRR1-203ENST00000540712 SPRR2EP22531 72 aa5.84□□□□□ -1.48
LRR1-203ENST00000540712 SPRR2BP35325 72 aa5.84□□□□□ -1.48
LRR1-203ENST00000540712 SPRR2AP35326 72 aa5.84□□□□□ -1.48
LRR1-203ENST00000540712 KRTAP2-3P0C7H8 128 aa5.83□□□□□ -1.48
LRR1-203ENST00000540712 KRTAP2-4Q9BYR9 128 aa5.83□□□□□ -1.48
LRR1-203ENST00000540712 LCE1AQ5T7P2 110 aa5.75□□□□□ -1.49
LRR1-203ENST00000540712 SVIPQ8NHG7 77 aa5.68□□□□□ -1.5
LRR1-203ENST00000540712 KRTAP19-7Q3SYF9 63 aa5.67□□□□□ -1.5
LRR1-203ENST00000540712 PMAIP1Q13794 54 aa5.67□□□□□ -1.5
LRR1-203ENST00000540712 LCE3AQ5TA76 89 aa5.67□□□□□ -1.5
LRR1-203ENST00000540712 KRTAP25-1Q3LHN0 102 aa5.65□□□□□ -1.5
LRR1-203ENST00000540712 KRTAP19-5Q3LI72 72 aa5.64□□□□□ -1.51
LRR1-203ENST00000540712 MT1EP04732 61 aa5.63□□□□□ -1.51
LRR1-203ENST00000540712 SPRR2DP22532 72 aa5.63□□□□□ -1.51
LRR1-203ENST00000540712 KRTAP2-2Q9BYT5 123 aa5.63□□□□□ -1.51
LRR1-203ENST00000540712 KRTAP2-1Q9BYU5 128 aa5.63□□□□□ -1.51
LRR1-203ENST00000540712 KRTAP19-3Q7Z4W3 81 aa5.55□□□□□ -1.52
LRR1-203ENST00000540712 ROMO1P60602 79 aa5.52□□□□□ -1.53
LRR1-203ENST00000540712 KRTAP12-3P60328 96 aa5.47□□□□□ -1.53
LRR1-203ENST00000540712 KTN1-AS1Q86SY8 53 aa5.46□□□□□ -1.53
LRR1-203ENST00000540712 MT1GP13640 62 aa5.46□□□□□ -1.54
LRR1-203ENST00000540712 KRTAP23-1A1A580 65 aa5.45□□□□□ -1.54
LRR1-203ENST00000540712 PP632Q6XCG6 107 aa5.45□□□□□ -1.54
LRR1-203ENST00000540712 MT1LQ93083 61 aa5.43□□□□□ -1.54
LRR1-203ENST00000540712 DSTQ03001 7570 aaKnown RBP5.41□□□□□ -1.54
LRR1-203ENST00000540712 MT1MQ8N339 61 aa5.34□□□□□ -1.55
LRR1-203ENST00000540712 H3BS24 57 aa5.28□□□□□ -1.56
LRR1-203ENST00000540712 KRTAP15-1Q3LI76 137 aa5.21□□□□□ -1.57
LRR1-203ENST00000540712 PRAC1Q96KF2 57 aa5.2□□□□□ -1.58
LRR1-203ENST00000540712 KRTAP4-3Q9BYR4 195 aa5.19□□□□□ -1.58
LRR1-203ENST00000540712 GPR98Q8WXG9 6306 aa5.16□□□□□ -1.58
LRR1-203ENST00000540712 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.07□□□□□ -1.6
LRR1-203ENST00000540712 LCE3CQ5T5A8 94 aa5.06□□□□□ -1.6
LRR1-203ENST00000540712 MT4P47944 62 aa4.99□□□□□ -1.61
LRR1-203ENST00000540712 HMCN1Q96RW7 5635 aa4.97□□□□□ -1.61
LRR1-203ENST00000540712 KRTAP5-4Q6L8H1 288 aa4.9□□□□□ -1.63
LRR1-203ENST00000540712 KRTAP5-5Q701N2 237 aaPredicted RBP4.85□□□□□ -1.63
LRR1-203ENST00000540712 AHNAK2Q8IVF2 5795 aa4.8□□□□□ -1.64
LRR1-203ENST00000540712 KRTAP5-10Q6L8G5 202 aa4.75□□□□□ -1.65
LRR1-203ENST00000540712 KRTAP12-4P60329 112 aa4.73□□□□□ -1.65
LRR1-203ENST00000540712 KRTAP9-6A8MVA2 160 aa4.71□□□□□ -1.66
LRR1-203ENST00000540712 SPRR5A0A1B0GTR4 108 aa4.65□□□□□ -1.67
LRR1-203ENST00000540712 MT1AP04731 61 aa4.63□□□□□ -1.67
LRR1-203ENST00000540712 KRTAP20-2Q3LI61 65 aa4.62□□□□□ -1.67
LRR1-203ENST00000540712 KRTAP5-11Q6L8G4 156 aa4.61□□□□□ -1.67
LRR1-203ENST00000540712 SYNE1Q8NF91 8797 aaKnown RBP4.61□□□□□ -1.67
LRR1-203ENST00000540712 KRTAP6-1Q3LI64 71 aa4.57□□□□□ -1.68
LRR1-203ENST00000540712 KRTAP5-7Q6L8G8 165 aa4.56□□□□□ -1.68
LRR1-203ENST00000540712 LUZP6Q538Z0 58 aa4.36□□□□□ -1.71
LRR1-203ENST00000540712 KRTAP5-2Q701N4 177 aa4.34□□□□□ -1.71
LRR1-203ENST00000540712 KRTAP6-2Q3LI66 62 aa4.33□□□□□ -1.72
LRR1-203ENST00000540712 KRTAP5-1Q6L8H4 278 aa4.3□□□□□ -1.72
LRR1-203ENST00000540712 MT3P25713 68 aa4.26□□□□□ -1.73
LRR1-203ENST00000540712 NDUFAF8A1L188 74 aa4.24□□□□□ -1.73
LRR1-203ENST00000540712 OBSCNQ5VST9 7968 aa4.19□□□□□ -1.74
LRR1-203ENST00000540712 KRTAP4-4Q9BYR3 166 aa4.19□□□□□ -1.74
LRR1-203ENST00000540712 KRTAP5-8O75690 187 aa4.1□□□□□ -1.75
LRR1-203ENST00000540712 LCE1EQ5T753 118 aa4.1□□□□□ -1.75
LRR1-203ENST00000540712 A0A0A0MQY5 61 aa4.09□□□□□ -1.75
LRR1-203ENST00000540712 MUC5BQ9HC84 5762 aaPredicted RBP4□□□□□ -1.77
LRR1-203ENST00000540712 MUC5ACP98088 5654 aa3.98□□□□□ -1.77
LRR1-203ENST00000540712 AHNAKQ09666 5890 aaKnown RBP3.93□□□□□ -1.78
LRR1-203ENST00000540712 LCE3DQ9BYE3 92 aa3.72□□□□□ -1.81
LRR1-203ENST00000540712 INE1O15225 51 aa3.59□□□□□ -1.83
LRR1-203ENST00000540712 LCE1BQ5T7P3 118 aa3.59□□□□□ -1.83
LRR1-203ENST00000540712 LCE3EQ5T5B0 92 aa3.55□□□□□ -1.84
LRR1-203ENST00000540712 LCE1CQ5T751 118 aa3.54□□□□□ -1.84
LRR1-203ENST00000540712 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
LRR1-203ENST00000540712 KRTAP21-2Q3LI59 83 aa3□□□□□ -1.93
LRR1-203ENST00000540712 PRM1P04553 51 aa2.83□□□□□ -1.96
LRR1-203ENST00000540712 PHGR1C9JFL3 82 aa2.78□□□□□ -1.96
LRR1-203ENST00000540712 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
LRR1-203ENST00000540712 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
LRR1-203ENST00000540712 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 95.5 ms