RNA–Protein interactions for RNA: ENST00000540266.5

SSPN-207, Transcript of sarcospan, humanhuman

TSL 4 BASIC

Gene SSPN, Length 587 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-207ENST00000540266 SPRR2GQ9BYE4 73 aa4.59□□□□□ -1.67
SSPN-207ENST00000540266 KRTAP4-6Q9BYQ5 205 aa4.59□□□□□ -1.67
SSPN-207ENST00000540266 KRTAP4-8Q9BYQ9 185 aa4.58□□□□□ -1.68
SSPN-207ENST00000540266 S4R3F8 94 aa4.51□□□□□ -1.69
SSPN-207ENST00000540266 KRTAP8-1Q8IUC2 63 aa4.5□□□□□ -1.69
SSPN-207ENST00000540266 M0QZ58 72 aa4.47□□□□□ -1.69
SSPN-207ENST00000540266 KRTAP4-9Q9BYQ8 210 aa4.46□□□□□ -1.7
SSPN-207ENST00000540266 MT3P25713 68 aa4.44□□□□□ -1.7
SSPN-207ENST00000540266 KRTAP13-4Q3LI77 160 aa4.44□□□□□ -1.7
SSPN-207ENST00000540266 A0A0D9SG42 100 aa4.42□□□□□ -1.7
SSPN-207ENST00000540266 C10orf95Q9H7T3 257 aa4.41□□□□□ -1.7
SSPN-207ENST00000540266 DSTQ03001 7570 aaKnown RBP4.41□□□□□ -1.7
SSPN-207ENST00000540266 KRTAP12-1P59990 96 aa4.4□□□□□ -1.71
SSPN-207ENST00000540266 KRTAP12-2P59991 146 aa4.37□□□□□ -1.71
SSPN-207ENST00000540266 PP632Q6XCG6 107 aa4.36□□□□□ -1.71
SSPN-207ENST00000540266 KRTAP4-8A0A0G2JLE6 195 aa4.35□□□□□ -1.71
SSPN-207ENST00000540266 KRTAP5-10Q6L8G5 202 aa4.34□□□□□ -1.71
SSPN-207ENST00000540266 PLAC4Q8WY50 150 aa4.34□□□□□ -1.71
SSPN-207ENST00000540266 MT1XP80297 61 aa4.33□□□□□ -1.72
SSPN-207ENST00000540266 HMCN1Q96RW7 5635 aa4.3□□□□□ -1.72
SSPN-207ENST00000540266 LCE1DQ5T752 114 aa4.28□□□□□ -1.72
SSPN-207ENST00000540266 PRO2289Q9P1D8 64 aa4.28□□□□□ -1.72
SSPN-207ENST00000540266 AHNAK2Q8IVF2 5795 aa4.27□□□□□ -1.73
SSPN-207ENST00000540266 KRTAP5-7Q6L8G8 165 aa4.25□□□□□ -1.73
SSPN-207ENST00000540266 R4GN34 69 aa4.2□□□□□ -1.74
SSPN-207ENST00000540266 LCE1FQ5T754 118 aa4.18□□□□□ -1.74
SSPN-207ENST00000540266 MT4P47944 62 aa4.12□□□□□ -1.75
SSPN-207ENST00000540266 KRTAP10-7P60409 375 aaPredicted RBP4.1□□□□□ -1.75
SSPN-207ENST00000540266 KRTAP10-12P60413 245 aa4.1□□□□□ -1.75
SSPN-207ENST00000540266 SPRR5A0A1B0GTR4 108 aa4.09□□□□□ -1.75
SSPN-207ENST00000540266 KRTAP5-3Q6L8H2 238 aa4.06□□□□□ -1.76
SSPN-207ENST00000540266 INE1O15225 51 aa4.02□□□□□ -1.77
SSPN-207ENST00000540266 KRTAP5-4Q6L8H1 288 aa3.96□□□□□ -1.78
SSPN-207ENST00000540266 TNP1P09430 55 aa3.95□□□□□ -1.78
SSPN-207ENST00000540266 KRTAP19-3Q7Z4W3 81 aa3.95□□□□□ -1.78
SSPN-207ENST00000540266 KRTAP4-11Q9BYQ6 195 aa3.92□□□□□ -1.78
SSPN-207ENST00000540266 KRTAP19-7Q3SYF9 63 aa3.89□□□□□ -1.79
SSPN-207ENST00000540266 LCE3CQ5T5A8 94 aa3.87□□□□□ -1.79
SSPN-207ENST00000540266 MT1EP04732 61 aa3.86□□□□□ -1.79
SSPN-207ENST00000540266 KRTAP4-7Q9BYR0 210 aa3.81□□□□□ -1.8
SSPN-207ENST00000540266 MT1GP13640 62 aa3.79□□□□□ -1.8
SSPN-207ENST00000540266 AHNAKQ09666 5890 aaKnown RBP3.75□□□□□ -1.81
SSPN-207ENST00000540266 KRTAP20-2Q3LI61 65 aa3.75□□□□□ -1.81
SSPN-207ENST00000540266 MT1MQ8N339 61 aa3.72□□□□□ -1.81
SSPN-207ENST00000540266 MUC5ACP98088 5654 aa3.69□□□□□ -1.82
SSPN-207ENST00000540266 KRTAP4-3Q9BYR4 195 aa3.66□□□□□ -1.82
SSPN-207ENST00000540266 MUC5BQ9HC84 5762 aaPredicted RBP3.63□□□□□ -1.83
SSPN-207ENST00000540266 KRTAP4-2Q9BYR5 136 aa3.63□□□□□ -1.83
SSPN-207ENST00000540266 KRTAP19-5Q3LI72 72 aa3.59□□□□□ -1.83
SSPN-207ENST00000540266 MT1LQ93083 61 aa3.58□□□□□ -1.84
SSPN-207ENST00000540266 LCE3EQ5T5B0 92 aa3.55□□□□□ -1.84
SSPN-207ENST00000540266 KRTAP5-8O75690 187 aa3.52□□□□□ -1.85
SSPN-207ENST00000540266 KRTAP12-4P60329 112 aa3.52□□□□□ -1.85
SSPN-207ENST00000540266 KRTAP5-5Q701N2 237 aaPredicted RBP3.52□□□□□ -1.85
SSPN-207ENST00000540266 LCE3AQ5TA76 89 aa3.51□□□□□ -1.85
SSPN-207ENST00000540266 KRTAP12-3P60328 96 aa3.41□□□□□ -1.86
SSPN-207ENST00000540266 SYNE1Q8NF91 8797 aaKnown RBP3.37□□□□□ -1.87
SSPN-207ENST00000540266 KRTAP5-2Q701N4 177 aa3.36□□□□□ -1.87
SSPN-207ENST00000540266 LCE1EQ5T753 118 aa3.22□□□□□ -1.89
SSPN-207ENST00000540266 LCE3DQ9BYE3 92 aa3.16□□□□□ -1.9
SSPN-207ENST00000540266 KRTAP5-1Q6L8H4 278 aa3.14□□□□□ -1.91
SSPN-207ENST00000540266 OBSCNQ5VST9 7968 aa3.13□□□□□ -1.91
SSPN-207ENST00000540266 KRTAP6-1Q3LI64 71 aa3.07□□□□□ -1.92
SSPN-207ENST00000540266 KRTAP6-2Q3LI66 62 aa3.05□□□□□ -1.92
SSPN-207ENST00000540266 MT1AP04731 61 aa3.02□□□□□ -1.93
SSPN-207ENST00000540266 KRTAP9-6A8MVA2 160 aa2.98□□□□□ -1.93
SSPN-207ENST00000540266 KRTAP5-11Q6L8G4 156 aa2.65□□□□□ -1.99
SSPN-207ENST00000540266 LCE1BQ5T7P3 118 aa2.58□□□□□ -2
SSPN-207ENST00000540266 LCE1CQ5T751 118 aa2.56□□□□□ -2
SSPN-207ENST00000540266 PRM1P04553 51 aa2.52□□□□□ -2.01
SSPN-207ENST00000540266 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
SSPN-207ENST00000540266 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.26□□□□□ -2.05
SSPN-207ENST00000540266 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
SSPN-207ENST00000540266 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
SSPN-207ENST00000540266 KRTAP4-4Q9BYR3 166 aa1.94□□□□□ -2.1
SSPN-207ENST00000540266 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
SSPN-207ENST00000540266 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 57.1 ms