RNA–Protein interactions for RNA: ENST00000537925.5

SNHG1-206, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,487 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-206ENST00000537925 A0A0A0MQY5 61 aa4.62□□□□□ -1.67
SNHG1-206ENST00000537925 KRTAP10-7P60409 375 aaPredicted RBP4.57□□□□□ -1.68
SNHG1-206ENST00000537925 LUZP6Q538Z0 58 aa4.57□□□□□ -1.68
SNHG1-206ENST00000537925 SPRR5A0A1B0GTR4 108 aa4.56□□□□□ -1.68
SNHG1-206ENST00000537925 KRTAP10-12P60413 245 aa4.56□□□□□ -1.68
SNHG1-206ENST00000537925 KRTAP4-8Q9BYQ9 185 aa4.56□□□□□ -1.68
SNHG1-206ENST00000537925 KRTAP4-8A0A0G2JLE6 195 aa4.53□□□□□ -1.68
SNHG1-206ENST00000537925 KRTAP8-1Q8IUC2 63 aa4.53□□□□□ -1.68
SNHG1-206ENST00000537925 SPRR2FQ96RM1 72 aa4.49□□□□□ -1.69
SNHG1-206ENST00000537925 SPRR2EP22531 72 aa4.48□□□□□ -1.69
SNHG1-206ENST00000537925 SPRR2BP35325 72 aa4.48□□□□□ -1.69
SNHG1-206ENST00000537925 SPRR2AP35326 72 aa4.48□□□□□ -1.69
SNHG1-206ENST00000537925 LCE3AQ5TA76 89 aa4.47□□□□□ -1.69
SNHG1-206ENST00000537925 LCE1AQ5T7P2 110 aa4.37□□□□□ -1.71
SNHG1-206ENST00000537925 LCE3BQ5TA77 95 aa4.35□□□□□ -1.71
SNHG1-206ENST00000537925 SPRR2DP22532 72 aa4.34□□□□□ -1.71
SNHG1-206ENST00000537925 KRTAP12-3P60328 96 aa4.3□□□□□ -1.72
SNHG1-206ENST00000537925 KRTAP19-7Q3SYF9 63 aa4.3□□□□□ -1.72
SNHG1-206ENST00000537925 MT1EP04732 61 aa4.24□□□□□ -1.73
SNHG1-206ENST00000537925 KRTAP9-9Q9BYP9 154 aa4.24□□□□□ -1.73
SNHG1-206ENST00000537925 KRTAP9-4Q9BYQ2 154 aa4.24□□□□□ -1.73
SNHG1-206ENST00000537925 KRTAP19-5Q3LI72 72 aa4.21□□□□□ -1.74
SNHG1-206ENST00000537925 DSTQ03001 7570 aaKnown RBP4.21□□□□□ -1.74
SNHG1-206ENST00000537925 KRTAP4-7Q9BYR0 210 aa4.19□□□□□ -1.74
SNHG1-206ENST00000537925 KRTAP4-9Q9BYQ8 210 aa4.18□□□□□ -1.74
SNHG1-206ENST00000537925 LCE5AQ5TCM9 118 aa4.17□□□□□ -1.74
SNHG1-206ENST00000537925 KRTAP19-3Q7Z4W3 81 aa4.17□□□□□ -1.74
SNHG1-206ENST00000537925 KRTAP4-12Q9BQ66 201 aa4.14□□□□□ -1.75
SNHG1-206ENST00000537925 KRTAP19-4Q3LI73 84 aa4.1□□□□□ -1.75
SNHG1-206ENST00000537925 AHNAK2Q8IVF2 5795 aa4.09□□□□□ -1.75
SNHG1-206ENST00000537925 MT1GP13640 62 aa4.09□□□□□ -1.75
SNHG1-206ENST00000537925 KRTAP5-10Q6L8G5 202 aa4.08□□□□□ -1.76
SNHG1-206ENST00000537925 MT1LQ93083 61 aa4.08□□□□□ -1.76
SNHG1-206ENST00000537925 LCE3CQ5T5A8 94 aa4.05□□□□□ -1.76
SNHG1-206ENST00000537925 LCE1DQ5T752 114 aa4.04□□□□□ -1.76
SNHG1-206ENST00000537925 HMCN1Q96RW7 5635 aa4.03□□□□□ -1.76
SNHG1-206ENST00000537925 KRTAP5-7Q6L8G8 165 aa4.03□□□□□ -1.76
SNHG1-206ENST00000537925 MT1MQ8N339 61 aa4.03□□□□□ -1.76
SNHG1-206ENST00000537925 KRTAP4-2Q9BYR5 136 aa4□□□□□ -1.77
SNHG1-206ENST00000537925 INE1O15225 51 aa3.99□□□□□ -1.77
SNHG1-206ENST00000537925 KRTAP5-3Q6L8H2 238 aa3.98□□□□□ -1.77
SNHG1-206ENST00000537925 KRTAP4-3Q9BYR4 195 aa3.92□□□□□ -1.78
SNHG1-206ENST00000537925 MT4P47944 62 aa3.85□□□□□ -1.79
SNHG1-206ENST00000537925 KRTAP9-6A8MVA2 160 aa3.83□□□□□ -1.8
SNHG1-206ENST00000537925 LCE4AQ5TA78 99 aa3.79□□□□□ -1.8
SNHG1-206ENST00000537925 KRTAP4-11Q9BYQ6 195 aa3.76□□□□□ -1.81
SNHG1-206ENST00000537925 KRTAP5-4Q6L8H1 288 aa3.75□□□□□ -1.81
SNHG1-206ENST00000537925 KRTAP5-5Q701N2 237 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-206ENST00000537925 AHNAKQ09666 5890 aaKnown RBP3.61□□□□□ -1.83
SNHG1-206ENST00000537925 SYNE1Q8NF91 8797 aaKnown RBP3.58□□□□□ -1.84
SNHG1-206ENST00000537925 KRTAP12-4P60329 112 aa3.52□□□□□ -1.85
SNHG1-206ENST00000537925 KRTAP20-2Q3LI61 65 aa3.52□□□□□ -1.85
SNHG1-206ENST00000537925 MUC5ACP98088 5654 aa3.51□□□□□ -1.85
SNHG1-206ENST00000537925 MT1AP04731 61 aa3.47□□□□□ -1.85
SNHG1-206ENST00000537925 MUC5BQ9HC84 5762 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-206ENST00000537925 KRTAP6-1Q3LI64 71 aa3.44□□□□□ -1.86
SNHG1-206ENST00000537925 KRTAP5-2Q701N4 177 aa3.32□□□□□ -1.88
SNHG1-206ENST00000537925 KRTAP5-8O75690 187 aa3.28□□□□□ -1.88
SNHG1-206ENST00000537925 KRTAP6-2Q3LI66 62 aa3.25□□□□□ -1.89
SNHG1-206ENST00000537925 MT3P25713 68 aa3.16□□□□□ -1.9
SNHG1-206ENST00000537925 OBSCNQ5VST9 7968 aa3.15□□□□□ -1.91
SNHG1-206ENST00000537925 LCE3DQ9BYE3 92 aa3.1□□□□□ -1.91
SNHG1-206ENST00000537925 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
SNHG1-206ENST00000537925 KRTAP5-1Q6L8H4 278 aa2.94□□□□□ -1.94
SNHG1-206ENST00000537925 LCE1EQ5T753 118 aa2.88□□□□□ -1.95
SNHG1-206ENST00000537925 PRM1P04553 51 aa2.85□□□□□ -1.95
SNHG1-206ENST00000537925 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.85□□□□□ -1.95
SNHG1-206ENST00000537925 LCE1CQ5T751 118 aa2.67□□□□□ -1.98
SNHG1-206ENST00000537925 LCE1BQ5T7P3 118 aa2.67□□□□□ -1.98
SNHG1-206ENST00000537925 KRTAP5-11Q6L8G4 156 aa2.51□□□□□ -2.01
SNHG1-206ENST00000537925 PHGR1C9JFL3 82 aa2.41□□□□□ -2.02
SNHG1-206ENST00000537925 LCE1FQ5T754 118 aa2.39□□□□□ -2.03
SNHG1-206ENST00000537925 KRTAP4-4Q9BYR3 166 aa2.36□□□□□ -2.03
SNHG1-206ENST00000537925 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
SNHG1-206ENST00000537925 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
SNHG1-206ENST00000537925 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
SNHG1-206ENST00000537925 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 9.2 ms