RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 SPRR2AP35326 72 aa5.31□□□□□ -1.56
RPAIN-205ENST00000536255 K7ERS5 55 aa5.26□□□□□ -1.57
RPAIN-205ENST00000536255 LCE1AQ5T7P2 110 aa5.26□□□□□ -1.57
RPAIN-205ENST00000536255 A6NED7 52 aa5.25□□□□□ -1.57
RPAIN-205ENST00000536255 TNP1P09430 55 aa5.19□□□□□ -1.58
RPAIN-205ENST00000536255 KRTAP2-3P0C7H8 128 aa5.19□□□□□ -1.58
RPAIN-205ENST00000536255 KRTAP2-4Q9BYR9 128 aa5.19□□□□□ -1.58
RPAIN-205ENST00000536255 C10orf95Q9H7T3 257 aa5.19□□□□□ -1.58
RPAIN-205ENST00000536255 SPRR2DP22532 72 aa5.13□□□□□ -1.59
RPAIN-205ENST00000536255 CDC42SE1Q9NRR8 79 aa5.06□□□□□ -1.6
RPAIN-205ENST00000536255 KRTAP19-7Q3SYF9 63 aa5.05□□□□□ -1.6
RPAIN-205ENST00000536255 A0A0A0MQY5 61 aa5.04□□□□□ -1.6
RPAIN-205ENST00000536255 KRTAP25-1Q3LHN0 102 aa5.03□□□□□ -1.6
RPAIN-205ENST00000536255 KRTAP2-2Q9BYT5 123 aa5.03□□□□□ -1.6
RPAIN-205ENST00000536255 KRTAP2-1Q9BYU5 128 aa5.03□□□□□ -1.6
RPAIN-205ENST00000536255 LCE3AQ5TA76 89 aa5.02□□□□□ -1.61
RPAIN-205ENST00000536255 MT1EP04732 61 aa5.01□□□□□ -1.61
RPAIN-205ENST00000536255 KRTAP19-5Q3LI72 72 aa5□□□□□ -1.61
RPAIN-205ENST00000536255 KRTAP19-3Q7Z4W3 81 aa4.94□□□□□ -1.62
RPAIN-205ENST00000536255 ROMO1P60602 79 aa4.9□□□□□ -1.63
RPAIN-205ENST00000536255 KRTAP23-1A1A580 65 aa4.87□□□□□ -1.63
RPAIN-205ENST00000536255 MT1GP13640 62 aa4.85□□□□□ -1.63
RPAIN-205ENST00000536255 KRTAP12-3P60328 96 aa4.85□□□□□ -1.63
RPAIN-205ENST00000536255 PP632Q6XCG6 107 aa4.84□□□□□ -1.63
RPAIN-205ENST00000536255 MT1LQ93083 61 aa4.82□□□□□ -1.64
RPAIN-205ENST00000536255 BRK1Q8WUW1 75 aa4.8□□□□□ -1.64
RPAIN-205ENST00000536255 DSTQ03001 7570 aaKnown RBP4.8□□□□□ -1.64
RPAIN-205ENST00000536255 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.76□□□□□ -1.65
RPAIN-205ENST00000536255 MT1MQ8N339 61 aa4.76□□□□□ -1.65
RPAIN-205ENST00000536255 KRTAP4-3Q9BYR4 195 aa4.64□□□□□ -1.67
RPAIN-205ENST00000536255 KRTAP15-1Q3LI76 137 aa4.63□□□□□ -1.67
RPAIN-205ENST00000536255 GPR98Q8WXG9 6306 aa4.6□□□□□ -1.67
RPAIN-205ENST00000536255 PMAIP1Q13794 54 aa4.54□□□□□ -1.68
RPAIN-205ENST00000536255 HMCN1Q96RW7 5635 aa4.51□□□□□ -1.69
RPAIN-205ENST00000536255 LCE3CQ5T5A8 94 aa4.49□□□□□ -1.69
RPAIN-205ENST00000536255 KRTAP5-11Q6L8G4 156 aa4.49□□□□□ -1.69
RPAIN-205ENST00000536255 KRTAP5-4Q6L8H1 288 aa4.49□□□□□ -1.69
RPAIN-205ENST00000536255 MT4P47944 62 aa4.48□□□□□ -1.69
RPAIN-205ENST00000536255 PRO0628Q9UI54 55 aa4.42□□□□□ -1.7
RPAIN-205ENST00000536255 KRTAP5-5Q701N2 237 aaPredicted RBP4.36□□□□□ -1.71
RPAIN-205ENST00000536255 AHNAK2Q8IVF2 5795 aa4.3□□□□□ -1.72
RPAIN-205ENST00000536255 PRAC1Q96KF2 57 aa4.25□□□□□ -1.73
RPAIN-205ENST00000536255 SYNE1Q8NF91 8797 aaKnown RBP4.24□□□□□ -1.73
RPAIN-205ENST00000536255 SPRR5A0A1B0GTR4 108 aa4.22□□□□□ -1.73
RPAIN-205ENST00000536255 KRTAP12-4P60329 112 aa4.22□□□□□ -1.73
RPAIN-205ENST00000536255 KRTAP20-2Q3LI61 65 aa4.22□□□□□ -1.73
RPAIN-205ENST00000536255 KRTAP9-6A8MVA2 160 aa4.17□□□□□ -1.74
RPAIN-205ENST00000536255 KTN1-AS1Q86SY8 53 aa4.17□□□□□ -1.74
RPAIN-205ENST00000536255 KRTAP5-10Q6L8G5 202 aa4.16□□□□□ -1.74
RPAIN-205ENST00000536255 MT1AP04731 61 aa4.12□□□□□ -1.75
RPAIN-205ENST00000536255 KRTAP5-1Q6L8H4 278 aa4.09□□□□□ -1.75
RPAIN-205ENST00000536255 KRTAP6-1Q3LI64 71 aa4.05□□□□□ -1.76
RPAIN-205ENST00000536255 KRTAP5-7Q6L8G8 165 aa4.05□□□□□ -1.76
RPAIN-205ENST00000536255 KRTAP4-4Q9BYR3 166 aa3.98□□□□□ -1.77
RPAIN-205ENST00000536255 LCE1EQ5T753 118 aa3.96□□□□□ -1.78
RPAIN-205ENST00000536255 KRTAP5-2Q701N4 177 aa3.95□□□□□ -1.78
RPAIN-205ENST00000536255 KRTAP6-2Q3LI66 62 aa3.86□□□□□ -1.79
RPAIN-205ENST00000536255 MT3P25713 68 aa3.78□□□□□ -1.8
RPAIN-205ENST00000536255 KRTAP5-8O75690 187 aa3.7□□□□□ -1.82
RPAIN-205ENST00000536255 OBSCNQ5VST9 7968 aa3.65□□□□□ -1.83
RPAIN-205ENST00000536255 LUZP6Q538Z0 58 aa3.64□□□□□ -1.83
RPAIN-205ENST00000536255 NDUFAF8A1L188 74 aa3.63□□□□□ -1.83
RPAIN-205ENST00000536255 MUC5BQ9HC84 5762 aaPredicted RBP3.54□□□□□ -1.84
RPAIN-205ENST00000536255 AHNAKQ09666 5890 aaKnown RBP3.54□□□□□ -1.84
RPAIN-205ENST00000536255 MUC5ACP98088 5654 aa3.54□□□□□ -1.84
RPAIN-205ENST00000536255 LCE3DQ9BYE3 92 aa3.31□□□□□ -1.88
RPAIN-205ENST00000536255 LCE1BQ5T7P3 118 aa3.2□□□□□ -1.9
RPAIN-205ENST00000536255 LCE3EQ5T5B0 92 aa3.16□□□□□ -1.9
RPAIN-205ENST00000536255 LCE1CQ5T751 118 aa3.16□□□□□ -1.9
RPAIN-205ENST00000536255 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
RPAIN-205ENST00000536255 KRTAP21-2Q3LI59 83 aa2.67□□□□□ -1.98
RPAIN-205ENST00000536255 INE1O15225 51 aa2.59□□□□□ -1.99
RPAIN-205ENST00000536255 PRM1P04553 51 aa2.5□□□□□ -2.01
RPAIN-205ENST00000536255 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
RPAIN-205ENST00000536255 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
RPAIN-205ENST00000536255 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
RPAIN-205ENST00000536255 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 103.9 ms