RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 MT4P47944 62 aa3.02□□□□□ -1.93
CHFR-211ENST00000535897 MT1EP04732 61 aa3□□□□□ -1.93
CHFR-211ENST00000535897 KRTAP19-7Q3SYF9 63 aa3□□□□□ -1.93
CHFR-211ENST00000535897 CAMK2N1Q7Z7J9 78 aa3□□□□□ -1.93
CHFR-211ENST00000535897 AHNAK2Q8IVF2 5795 aa3□□□□□ -1.93
CHFR-211ENST00000535897 A0A1B0GU33 70 aa2.99□□□□□ -1.93
CHFR-211ENST00000535897 A8MU10 97 aa2.97□□□□□ -1.93
CHFR-211ENST00000535897 LCE4AQ5TA78 99 aa2.97□□□□□ -1.93
CHFR-211ENST00000535897 PP632Q6XCG6 107 aa2.94□□□□□ -1.94
CHFR-211ENST00000535897 MT1GP13640 62 aa2.92□□□□□ -1.94
CHFR-211ENST00000535897 KRTAP5-10Q6L8G5 202 aa2.92□□□□□ -1.94
CHFR-211ENST00000535897 A0A0D9SG42 100 aa2.91□□□□□ -1.94
CHFR-211ENST00000535897 KRTAP19-5Q3LI72 72 aa2.89□□□□□ -1.95
CHFR-211ENST00000535897 KRTAP13-4Q3LI77 160 aa2.89□□□□□ -1.95
CHFR-211ENST00000535897 MT1MQ8N339 61 aa2.88□□□□□ -1.95
CHFR-211ENST00000535897 SPINT4Q6UDR6 99 aa2.87□□□□□ -1.95
CHFR-211ENST00000535897 KRTAP4-6Q9BYQ5 205 aa2.87□□□□□ -1.95
CHFR-211ENST00000535897 KRTAP25-1Q3LHN0 102 aa2.86□□□□□ -1.95
CHFR-211ENST00000535897 ROMO1P60602 79 aa2.84□□□□□ -1.95
CHFR-211ENST00000535897 KRTAP5-4Q6L8H1 288 aa2.84□□□□□ -1.95
CHFR-211ENST00000535897 KRTAP5-7Q6L8G8 165 aa2.83□□□□□ -1.96
CHFR-211ENST00000535897 KRTAP4-3Q9BYR4 195 aa2.83□□□□□ -1.96
CHFR-211ENST00000535897 KRTAP5-3Q6L8H2 238 aa2.82□□□□□ -1.96
CHFR-211ENST00000535897 MT1LQ93083 61 aa2.82□□□□□ -1.96
CHFR-211ENST00000535897 PRAC1Q96KF2 57 aa2.82□□□□□ -1.96
CHFR-211ENST00000535897 SPRR5A0A1B0GTR4 108 aa2.8□□□□□ -1.96
CHFR-211ENST00000535897 KRTAP12-1P59990 96 aa2.8□□□□□ -1.96
CHFR-211ENST00000535897 C10orf95Q9H7T3 257 aa2.74□□□□□ -1.97
CHFR-211ENST00000535897 KRTAP20-2Q3LI61 65 aa2.72□□□□□ -1.97
CHFR-211ENST00000535897 LCE3AQ5TA76 89 aa2.72□□□□□ -1.97
CHFR-211ENST00000535897 TNP1P09430 55 aa2.69□□□□□ -1.98
CHFR-211ENST00000535897 KRTAP4-7Q9BYR0 210 aa2.69□□□□□ -1.98
CHFR-211ENST00000535897 LOC100996750A0A140TA64 210 aa2.68□□□□□ -1.98
CHFR-211ENST00000535897 KRTAP12-4P60329 112 aa2.67□□□□□ -1.98
CHFR-211ENST00000535897 KRTAP5-5Q701N2 237 aaPredicted RBP2.63□□□□□ -1.99
CHFR-211ENST00000535897 KRTAP23-1A1A580 65 aa2.62□□□□□ -1.99
CHFR-211ENST00000535897 KRTAP12-3P60328 96 aa2.62□□□□□ -1.99
CHFR-211ENST00000535897 SYNE1Q8NF91 8797 aaKnown RBP2.61□□□□□ -1.99
CHFR-211ENST00000535897 H3BS24 57 aa2.61□□□□□ -1.99
CHFR-211ENST00000535897 AHNAKQ09666 5890 aaKnown RBP2.6□□□□□ -1.99
CHFR-211ENST00000535897 KRTAP15-1Q3LI76 137 aa2.56□□□□□ -2
CHFR-211ENST00000535897 MUC5ACP98088 5654 aa2.55□□□□□ -2
CHFR-211ENST00000535897 KRTAP4-11Q9BYQ6 195 aa2.54□□□□□ -2
CHFR-211ENST00000535897 LUZP6Q538Z0 58 aa2.52□□□□□ -2.01
CHFR-211ENST00000535897 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
CHFR-211ENST00000535897 KRTAP5-8O75690 187 aa2.47□□□□□ -2.01
CHFR-211ENST00000535897 NDUFAF8A1L188 74 aa2.46□□□□□ -2.02
CHFR-211ENST00000535897 OBSCNQ5VST9 7968 aa2.45□□□□□ -2.02
CHFR-211ENST00000535897 KRTAP4-12Q9BQ66 201 aa2.45□□□□□ -2.02
CHFR-211ENST00000535897 KRTAP5-2Q701N4 177 aa2.44□□□□□ -2.02
CHFR-211ENST00000535897 A0A0A0MQY5 61 aa2.43□□□□□ -2.02
CHFR-211ENST00000535897 MT1AP04731 61 aa2.4□□□□□ -2.03
CHFR-211ENST00000535897 KRTAP6-1Q3LI64 71 aa2.4□□□□□ -2.03
CHFR-211ENST00000535897 KRTAP19-4Q3LI73 84 aa2.4□□□□□ -2.03
CHFR-211ENST00000535897 KRTAP9-9Q9BYP9 154 aa2.4□□□□□ -2.03
CHFR-211ENST00000535897 LCE3CQ5T5A8 94 aa2.38□□□□□ -2.03
CHFR-211ENST00000535897 KRTAP6-2Q3LI66 62 aa2.36□□□□□ -2.03
CHFR-211ENST00000535897 KRTAP9-4Q9BYQ2 154 aa2.34□□□□□ -2.03
CHFR-211ENST00000535897 INE1O15225 51 aa2.24□□□□□ -2.05
CHFR-211ENST00000535897 KRTAP5-1Q6L8H4 278 aa2.24□□□□□ -2.05
CHFR-211ENST00000535897 KRTAP9-6A8MVA2 160 aa2.23□□□□□ -2.05
CHFR-211ENST00000535897 MT3P25713 68 aa2.22□□□□□ -2.05
CHFR-211ENST00000535897 KRTAP4-2Q9BYR5 136 aa2.09□□□□□ -2.07
CHFR-211ENST00000535897 LCE1EQ5T753 118 aa2.06□□□□□ -2.08
CHFR-211ENST00000535897 LCE1BQ5T7P3 118 aa2.02□□□□□ -2.09
CHFR-211ENST00000535897 LCE1CQ5T751 118 aa1.92□□□□□ -2.1
CHFR-211ENST00000535897 KRTAP5-11Q6L8G4 156 aa1.77□□□□□ -2.13
CHFR-211ENST00000535897 LCE1FQ5T754 118 aa1.76□□□□□ -2.13
CHFR-211ENST00000535897 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
CHFR-211ENST00000535897 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.7□□□□□ -2.14
CHFR-211ENST00000535897 LCE3DQ9BYE3 92 aa1.7□□□□□ -2.14
CHFR-211ENST00000535897 LCE3EQ5T5B0 92 aa1.64□□□□□ -2.15
CHFR-211ENST00000535897 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
CHFR-211ENST00000535897 MUC19Q7Z5P9 8384 aa1.55□□□□□ -2.16
CHFR-211ENST00000535897 KRTAP4-4Q9BYR3 166 aa1.52□□□□□ -2.17
CHFR-211ENST00000535897 PRM1P04553 51 aa1.42□□□□□ -2.18
CHFR-211ENST00000535897 KRTAP21-1Q3LI58 79 aa1.32□□□□□ -2.2
CHFR-211ENST00000535897 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 114.8 ms