RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 KRTAP19-3Q7Z4W3 81 aa1.06□□□□□ -2.24
SNHG1-202ENST00000535689 TP53AIP1Q9HCN2 124 aa1.06□□□□□ -2.24
SNHG1-202ENST00000535689 F8W1H4 67 aa1.05□□□□□ -2.24
SNHG1-202ENST00000535689 ACYP1P07311 99 aa1.05□□□□□ -2.24
SNHG1-202ENST00000535689 CDC42SE1Q9NRR8 79 aa1.05□□□□□ -2.24
SNHG1-202ENST00000535689 M0QZ58 72 aa1.04□□□□□ -2.24
SNHG1-202ENST00000535689 DLEU1O43261 78 aa1.04□□□□□ -2.24
SNHG1-202ENST00000535689 MT-ATP8P03928 68 aa1.04□□□□□ -2.24
SNHG1-202ENST00000535689 ATOH7Q8N100 152 aa1.04□□□□□ -2.24
SNHG1-202ENST00000535689 HIGD1BQ9P298 99 aa1.04□□□□□ -2.24
SNHG1-202ENST00000535689 UQCRQO14949 82 aa1.03□□□□□ -2.24
SNHG1-202ENST00000535689 COX8AP10176 69 aa1.03□□□□□ -2.24
SNHG1-202ENST00000535689 BRK1Q8WUW1 75 aa1.03□□□□□ -2.24
SNHG1-202ENST00000535689 VAMP8Q9BV40 100 aa1.03□□□□□ -2.24
SNHG1-202ENST00000535689 TRAV22A0A0B4J277 110 aa1.01□□□□□ -2.25
SNHG1-202ENST00000535689 LOC105371267A0A1B0GV96 52 aa1.01□□□□□ -2.25
SNHG1-202ENST00000535689 ATXN8Q156A1 80 aa1.01□□□□□ -2.25
SNHG1-202ENST00000535689 CYP4F30PQ9H0H9 118 aa1.01□□□□□ -2.25
SNHG1-202ENST00000535689 LOC101927531A0A1B0GV80 90 aa1□□□□□ -2.25
SNHG1-202ENST00000535689 MT1EP04732 61 aa1□□□□□ -2.25
SNHG1-202ENST00000535689 A0A087WVE0 104 aa0.99□□□□□ -2.25
SNHG1-202ENST00000535689 S100A1P23297 94 aa0.99□□□□□ -2.25
SNHG1-202ENST00000535689 KRTAP20-2Q3LI61 65 aa0.99□□□□□ -2.25
SNHG1-202ENST00000535689 ATOX1O00244 68 aa0.98□□□□□ -2.25
SNHG1-202ENST00000535689 MIR22HGQ0VDD5 57 aa0.98□□□□□ -2.25
SNHG1-202ENST00000535689 KRTAP19-7Q3SYF9 63 aa0.98□□□□□ -2.25
SNHG1-202ENST00000535689 C14orf144Q96I85 54 aa0.98□□□□□ -2.25
SNHG1-202ENST00000535689 UBL5Q9BZL1 73 aa0.98□□□□□ -2.25
SNHG1-202ENST00000535689 J3QR89 54 aa0.97□□□□□ -2.25
SNHG1-202ENST00000535689 SPATA45Q537H7 98 aa0.97□□□□□ -2.25
SNHG1-202ENST00000535689 MT1MQ8N339 61 aa0.97□□□□□ -2.25
SNHG1-202ENST00000535689 SPTSSBQ8NFR3 76 aa0.97□□□□□ -2.25
SNHG1-202ENST00000535689 HSD52Q0P140 79 aa0.96□□□□□ -2.26
SNHG1-202ENST00000535689 A0A0D9SG42 100 aa0.95□□□□□ -2.26
SNHG1-202ENST00000535689 A0A1W2PPM0 123 aa0.95□□□□□ -2.26
SNHG1-202ENST00000535689 KRTAP19-5Q3LI72 72 aa0.93□□□□□ -2.26
SNHG1-202ENST00000535689 MT1LQ93083 61 aa0.93□□□□□ -2.26
SNHG1-202ENST00000535689 DMAC1Q96GE9 116 aa0.93□□□□□ -2.26
SNHG1-202ENST00000535689 K7EP34 96 aa0.92□□□□□ -2.26
SNHG1-202ENST00000535689 MUC5BQ9HC84 5762 aaPredicted RBP0.92□□□□□ -2.26
SNHG1-202ENST00000535689 AHNAKQ09666 5890 aaKnown RBP0.91□□□□□ -2.26
SNHG1-202ENST00000535689 H0Y9P7 68 aa0.91□□□□□ -2.26
SNHG1-202ENST00000535689 C10orf95Q9H7T3 257 aa0.91□□□□□ -2.26
SNHG1-202ENST00000535689 SYNE1Q8NF91 8797 aaKnown RBP0.91□□□□□ -2.26
SNHG1-202ENST00000535689 MUC5ACP98088 5654 aa0.9□□□□□ -2.27
SNHG1-202ENST00000535689 CCDC179H3BU77 68 aa0.9□□□□□ -2.27
SNHG1-202ENST00000535689 ACYP2P14621 99 aa0.9□□□□□ -2.27
SNHG1-202ENST00000535689 UQCR10Q9UDW1 63 aa0.9□□□□□ -2.27
SNHG1-202ENST00000535689 K7ERU9 68 aa0.89□□□□□ -2.27
SNHG1-202ENST00000535689 M0R143 59 aa0.89□□□□□ -2.27
SNHG1-202ENST00000535689 LINC00208Q96KT6 92 aa0.89□□□□□ -2.27
SNHG1-202ENST00000535689 SPCS1Q9Y6A9 102 aa0.89□□□□□ -2.27
SNHG1-202ENST00000535689 TNP1P09430 55 aa0.88□□□□□ -2.27
SNHG1-202ENST00000535689 CHKB-CPT1BH3BT56 60 aa0.86□□□□□ -2.27
SNHG1-202ENST00000535689 SERP1Q9Y6X1 66 aa0.85□□□□□ -2.27
SNHG1-202ENST00000535689 ATP5EP2Q5VTU8 51 aa0.83□□□□□ -2.28
SNHG1-202ENST00000535689 MT1AP04731 61 aa0.81□□□□□ -2.28
SNHG1-202ENST00000535689 PYY3Q5JQD4 70 aa0.8□□□□□ -2.28
SNHG1-202ENST00000535689 KRTAP6-2Q3LI66 62 aa0.79□□□□□ -2.28
SNHG1-202ENST00000535689 KRTAP6-1Q3LI64 71 aa0.78□□□□□ -2.28
SNHG1-202ENST00000535689 GTF2H5Q6ZYL4 71 aa0.77□□□□□ -2.29
SNHG1-202ENST00000535689 SPATA8Q6RVD6 105 aa0.76□□□□□ -2.29
SNHG1-202ENST00000535689 LINC00643Q86TS7 51 aa0.76□□□□□ -2.29
SNHG1-202ENST00000535689 SERP2Q8N6R1 65 aa0.76□□□□□ -2.29
SNHG1-202ENST00000535689 H7BZZ5 65 aa0.74□□□□□ -2.29
SNHG1-202ENST00000535689 ETDBQ3ZM63 59 aa0.74□□□□□ -2.29
SNHG1-202ENST00000535689 COL5A1-AS1Q5SY13 56 aa0.72□□□□□ -2.29
SNHG1-202ENST00000535689 SMIM6P0DI80 62 aa0.71□□□□□ -2.3
SNHG1-202ENST00000535689 A0A1B0GU69 56 aa0.7□□□□□ -2.3
SNHG1-202ENST00000535689 A0A1B0GV90 55 aa0.7□□□□□ -2.3
SNHG1-202ENST00000535689 PRR15LQ9BU68 103 aa0.7□□□□□ -2.3
SNHG1-202ENST00000535689 PHGR1C9JFL3 82 aa0.69□□□□□ -2.3
SNHG1-202ENST00000535689 ATP5EP56381 51 aaPredicted RBP0.69□□□□□ -2.3
SNHG1-202ENST00000535689 UQCR11O14957 56 aa0.63□□□□□ -2.31
SNHG1-202ENST00000535689 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
SNHG1-202ENST00000535689 KRTAP21-1Q3LI58 79 aa0.56□□□□□ -2.32
SNHG1-202ENST00000535689 LINC01558Q9Y6Z2 57 aa0.56□□□□□ -2.32
SNHG1-202ENST00000535689 PRM1P04553 51 aa0.21□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 6.1 ms