RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 KRTAP12-4P60329 112 aa3.68□□□□□ -1.82
VAMP1-204ENST00000535180 TP53AIP1Q9HCN2 124 aa3.67□□□□□ -1.82
VAMP1-204ENST00000535180 SMIM26A0A096LP01 95 aa3.64□□□□□ -1.83
VAMP1-204ENST00000535180 H3BS24 57 aa3.64□□□□□ -1.83
VAMP1-204ENST00000535180 PMAIP1Q13794 54 aa3.62□□□□□ -1.83
VAMP1-204ENST00000535180 SYNE1Q8NF91 8797 aaKnown RBP3.62□□□□□ -1.83
VAMP1-204ENST00000535180 KRTAP5-5Q701N2 237 aaPredicted RBP3.6□□□□□ -1.83
VAMP1-204ENST00000535180 TRAV22A0A0B4J277 110 aa3.57□□□□□ -1.84
VAMP1-204ENST00000535180 LOC101927531A0A1B0GV80 90 aa3.57□□□□□ -1.84
VAMP1-204ENST00000535180 MP68P56378 58 aa3.57□□□□□ -1.84
VAMP1-204ENST00000535180 H0Y9P7 68 aa3.56□□□□□ -1.84
VAMP1-204ENST00000535180 A0A0D9SG42 100 aa3.55□□□□□ -1.84
VAMP1-204ENST00000535180 LINC00208Q96KT6 92 aa3.55□□□□□ -1.84
VAMP1-204ENST00000535180 H3BPC8 53 aa3.54□□□□□ -1.84
VAMP1-204ENST00000535180 A0A0A0MQY5 61 aa3.51□□□□□ -1.85
VAMP1-204ENST00000535180 SPANXA2-OT1Q8N9U9 137 aa3.51□□□□□ -1.85
VAMP1-204ENST00000535180 OBSCNQ5VST9 7968 aa3.51□□□□□ -1.85
VAMP1-204ENST00000535180 Q1T7F1 81 aa3.5□□□□□ -1.85
VAMP1-204ENST00000535180 CAMK2N1Q7Z7J9 78 aa3.5□□□□□ -1.85
VAMP1-204ENST00000535180 BRK1Q8WUW1 75 aa3.5□□□□□ -1.85
VAMP1-204ENST00000535180 KRTAP19-4Q3LI73 84 aa3.49□□□□□ -1.85
VAMP1-204ENST00000535180 KRTAP5-2Q701N4 177 aa3.47□□□□□ -1.85
VAMP1-204ENST00000535180 PSPHP1O15172 72 aa3.45□□□□□ -1.86
VAMP1-204ENST00000535180 KTN1-AS1Q86SY8 53 aa3.44□□□□□ -1.86
VAMP1-204ENST00000535180 COA5Q86WW8 74 aa3.44□□□□□ -1.86
VAMP1-204ENST00000535180 PRR15LQ9BU68 103 aa3.41□□□□□ -1.86
VAMP1-204ENST00000535180 CHKB-CPT1BH3BT56 60 aa3.38□□□□□ -1.87
VAMP1-204ENST00000535180 C10orf95Q9H7T3 257 aa3.36□□□□□ -1.87
VAMP1-204ENST00000535180 LINC01558Q9Y6Z2 57 aa3.36□□□□□ -1.87
VAMP1-204ENST00000535180 A8MU10 97 aa3.35□□□□□ -1.87
VAMP1-204ENST00000535180 A6NED7 52 aa3.34□□□□□ -1.87
VAMP1-204ENST00000535180 DMAC1Q96GE9 116 aa3.33□□□□□ -1.88
VAMP1-204ENST00000535180 ACYP2P14621 99 aa3.32□□□□□ -1.88
VAMP1-204ENST00000535180 CDC42SE1Q9NRR8 79 aa3.3□□□□□ -1.88
VAMP1-204ENST00000535180 SPTSSBQ8NFR3 76 aa3.29□□□□□ -1.88
VAMP1-204ENST00000535180 LCE3AQ5TA76 89 aa3.27□□□□□ -1.89
VAMP1-204ENST00000535180 KRTAP13-4Q3LI77 160 aa3.26□□□□□ -1.89
VAMP1-204ENST00000535180 A0A1B0GU69 56 aa3.23□□□□□ -1.89
VAMP1-204ENST00000535180 KRTAP5-1Q6L8H4 278 aa3.23□□□□□ -1.89
VAMP1-204ENST00000535180 SPATA8Q6RVD6 105 aa3.19□□□□□ -1.9
VAMP1-204ENST00000535180 MIR22HGQ0VDD5 57 aa3.17□□□□□ -1.9
VAMP1-204ENST00000535180 UQCR11O14957 56 aa3.16□□□□□ -1.9
VAMP1-204ENST00000535180 KRTAP6-1Q3LI64 71 aa3.16□□□□□ -1.9
VAMP1-204ENST00000535180 KRTAP6-2Q3LI66 62 aa3.16□□□□□ -1.9
VAMP1-204ENST00000535180 KRTAP12-3P60328 96 aa3.14□□□□□ -1.91
VAMP1-204ENST00000535180 MT1AP04731 61 aa3.13□□□□□ -1.91
VAMP1-204ENST00000535180 PRAC1Q96KF2 57 aa3.1□□□□□ -1.91
VAMP1-204ENST00000535180 SPINT4Q6UDR6 99 aa3.08□□□□□ -1.92
VAMP1-204ENST00000535180 A0A1B0GU33 70 aa3.06□□□□□ -1.92
VAMP1-204ENST00000535180 TNP1P09430 55 aa3.05□□□□□ -1.92
VAMP1-204ENST00000535180 K7ERS5 55 aa3.04□□□□□ -1.92
VAMP1-204ENST00000535180 KRTAP12-1P59990 96 aa2.99□□□□□ -1.93
VAMP1-204ENST00000535180 ROMO1P60602 79 aa2.98□□□□□ -1.93
VAMP1-204ENST00000535180 LUZP6Q538Z0 58 aa2.98□□□□□ -1.93
VAMP1-204ENST00000535180 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.97□□□□□ -1.93
VAMP1-204ENST00000535180 KRTAP25-1Q3LHN0 102 aa2.94□□□□□ -1.94
VAMP1-204ENST00000535180 MT3P25713 68 aa2.9□□□□□ -1.95
VAMP1-204ENST00000535180 KRTAP23-1A1A580 65 aa2.88□□□□□ -1.95
VAMP1-204ENST00000535180 LCE1EQ5T753 118 aa2.84□□□□□ -1.95
VAMP1-204ENST00000535180 LCE3CQ5T5A8 94 aa2.83□□□□□ -1.96
VAMP1-204ENST00000535180 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
VAMP1-204ENST00000535180 NDUFAF8A1L188 74 aa2.77□□□□□ -1.97
VAMP1-204ENST00000535180 LCE1BQ5T7P3 118 aa2.71□□□□□ -1.98
VAMP1-204ENST00000535180 KRTAP9-6A8MVA2 160 aa2.7□□□□□ -1.98
VAMP1-204ENST00000535180 KRTAP15-1Q3LI76 137 aa2.7□□□□□ -1.98
VAMP1-204ENST00000535180 PHGR1C9JFL3 82 aa2.66□□□□□ -1.98
VAMP1-204ENST00000535180 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
VAMP1-204ENST00000535180 LCE1FQ5T754 118 aa2.56□□□□□ -2
VAMP1-204ENST00000535180 KRTAP4-4Q9BYR3 166 aa2.51□□□□□ -2.01
VAMP1-204ENST00000535180 INE1O15225 51 aa2.42□□□□□ -2.02
VAMP1-204ENST00000535180 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
VAMP1-204ENST00000535180 KRTAP21-2Q3LI59 83 aa2.11□□□□□ -2.07
VAMP1-204ENST00000535180 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
VAMP1-204ENST00000535180 LCE3DQ9BYE3 92 aa1.9□□□□□ -2.11
VAMP1-204ENST00000535180 LCE3EQ5T5B0 92 aa1.66□□□□□ -2.14
VAMP1-204ENST00000535180 PRM1P04553 51 aa1.55□□□□□ -2.16
VAMP1-204ENST00000535180 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 168.5 ms