RNA–Protein interactions for RNA: ENST00000535174.5

DDB1-205, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-205ENST00000535174 KRTAP2-2Q9BYT5 123 aa6.76□□□□□ -1.33
DDB1-205ENST00000535174 KRTAP2-1Q9BYU5 128 aa6.76□□□□□ -1.33
DDB1-205ENST00000535174 KRTAP4-8A0A0G2JLE6 195 aa6.73□□□□□ -1.33
DDB1-205ENST00000535174 KRTAP4-8Q9BYQ9 185 aa6.73□□□□□ -1.33
DDB1-205ENST00000535174 KRTAP10-7P60409 375 aaPredicted RBP6.66□□□□□ -1.34
DDB1-205ENST00000535174 KRTAP10-12P60413 245 aa6.64□□□□□ -1.35
DDB1-205ENST00000535174 LCE3BQ5TA77 95 aa6.59□□□□□ -1.35
DDB1-205ENST00000535174 LCE3AQ5TA76 89 aa6.57□□□□□ -1.36
DDB1-205ENST00000535174 KRTAP12-3P60328 96 aa6.34□□□□□ -1.39
DDB1-205ENST00000535174 KRTAP19-5Q3LI72 72 aa6.29□□□□□ -1.4
DDB1-205ENST00000535174 DSTQ03001 7570 aaKnown RBP6.23□□□□□ -1.41
DDB1-205ENST00000535174 KRTAP15-1Q3LI76 137 aa6.22□□□□□ -1.41
DDB1-205ENST00000535174 LCE5AQ5TCM9 118 aa6.22□□□□□ -1.41
DDB1-205ENST00000535174 GPR98Q8WXG9 6306 aa6.21□□□□□ -1.42
DDB1-205ENST00000535174 KRTAP19-7Q3SYF9 63 aa6.21□□□□□ -1.42
DDB1-205ENST00000535174 KRTAP19-3Q7Z4W3 81 aa6.2□□□□□ -1.42
DDB1-205ENST00000535174 MT1EP04732 61 aa6.19□□□□□ -1.42
DDB1-205ENST00000535174 KRTAP4-9Q9BYQ8 210 aa6.18□□□□□ -1.42
DDB1-205ENST00000535174 KRTAP19-4Q3LI73 84 aa6.09□□□□□ -1.43
DDB1-205ENST00000535174 MT1GP13640 62 aa6□□□□□ -1.45
DDB1-205ENST00000535174 LCE1DQ5T752 114 aa6□□□□□ -1.45
DDB1-205ENST00000535174 MT1LQ93083 61 aa6□□□□□ -1.45
DDB1-205ENST00000535174 SPRR5A0A1B0GTR4 108 aa5.94□□□□□ -1.46
DDB1-205ENST00000535174 MT4P47944 62 aa5.94□□□□□ -1.46
DDB1-205ENST00000535174 LCE4AQ5TA78 99 aa5.93□□□□□ -1.46
DDB1-205ENST00000535174 LCE3CQ5T5A8 94 aa5.92□□□□□ -1.46
DDB1-205ENST00000535174 MT1MQ8N339 61 aa5.92□□□□□ -1.46
DDB1-205ENST00000535174 HMCN1Q96RW7 5635 aa5.92□□□□□ -1.46
DDB1-205ENST00000535174 AHNAK2Q8IVF2 5795 aa5.79□□□□□ -1.48
DDB1-205ENST00000535174 KRTAP4-3Q9BYR4 195 aa5.78□□□□□ -1.48
DDB1-205ENST00000535174 LUZP6Q538Z0 58 aa5.74□□□□□ -1.49
DDB1-205ENST00000535174 KRTAP5-4Q6L8H1 288 aa5.73□□□□□ -1.49
DDB1-205ENST00000535174 KRTAP4-7Q9BYR0 210 aa5.71□□□□□ -1.5
DDB1-205ENST00000535174 KRTAP4-6Q9BYQ5 205 aa5.69□□□□□ -1.5
DDB1-205ENST00000535174 KRTAP5-10Q6L8G5 202 aa5.67□□□□□ -1.5
DDB1-205ENST00000535174 KRTAP9-6A8MVA2 160 aa5.55□□□□□ -1.52
DDB1-205ENST00000535174 NDUFAF8A1L188 74 aa5.51□□□□□ -1.53
DDB1-205ENST00000535174 KRTAP5-3Q6L8H2 238 aa5.5□□□□□ -1.53
DDB1-205ENST00000535174 KRTAP5-7Q6L8G8 165 aa5.48□□□□□ -1.53
DDB1-205ENST00000535174 KRTAP20-2Q3LI61 65 aa5.47□□□□□ -1.53
DDB1-205ENST00000535174 KRTAP5-5Q701N2 237 aaPredicted RBP5.41□□□□□ -1.54
DDB1-205ENST00000535174 KRTAP12-4P60329 112 aa5.38□□□□□ -1.55
DDB1-205ENST00000535174 LOC100996750A0A140TA64 210 aa5.37□□□□□ -1.55
DDB1-205ENST00000535174 SYNE1Q8NF91 8797 aaKnown RBP5.29□□□□□ -1.56
DDB1-205ENST00000535174 MT1AP04731 61 aa5.13□□□□□ -1.59
DDB1-205ENST00000535174 H3BS24 57 aa5.11□□□□□ -1.59
DDB1-205ENST00000535174 KRTAP4-11Q9BYQ6 195 aa5.04□□□□□ -1.6
DDB1-205ENST00000535174 KRTAP6-1Q3LI64 71 aa5.02□□□□□ -1.61
DDB1-205ENST00000535174 KRTAP5-2Q701N4 177 aa4.98□□□□□ -1.61
DDB1-205ENST00000535174 A0A0A0MQY5 61 aa4.97□□□□□ -1.61
DDB1-205ENST00000535174 KRTAP5-8O75690 187 aa4.86□□□□□ -1.63
DDB1-205ENST00000535174 KRTAP9-4Q9BYQ2 154 aa4.86□□□□□ -1.63
DDB1-205ENST00000535174 AHNAKQ09666 5890 aaKnown RBP4.81□□□□□ -1.64
DDB1-205ENST00000535174 KRTAP6-2Q3LI66 62 aa4.81□□□□□ -1.64
DDB1-205ENST00000535174 MUC5ACP98088 5654 aa4.8□□□□□ -1.64
DDB1-205ENST00000535174 MUC5BQ9HC84 5762 aaPredicted RBP4.78□□□□□ -1.64
DDB1-205ENST00000535174 OBSCNQ5VST9 7968 aa4.75□□□□□ -1.65
DDB1-205ENST00000535174 KRTAP9-9Q9BYP9 154 aa4.7□□□□□ -1.66
DDB1-205ENST00000535174 MT3P25713 68 aa4.65□□□□□ -1.67
DDB1-205ENST00000535174 INE1O15225 51 aa4.64□□□□□ -1.67
DDB1-205ENST00000535174 KRTAP5-1Q6L8H4 278 aa4.51□□□□□ -1.69
DDB1-205ENST00000535174 LCE3DQ9BYE3 92 aa4.45□□□□□ -1.7
DDB1-205ENST00000535174 LCE3EQ5T5B0 92 aa4.33□□□□□ -1.72
DDB1-205ENST00000535174 LCE1EQ5T753 118 aa4.23□□□□□ -1.73
DDB1-205ENST00000535174 LCE1BQ5T7P3 118 aa4.08□□□□□ -1.76
DDB1-205ENST00000535174 KRTAP4-2Q9BYR5 136 aa4.03□□□□□ -1.76
DDB1-205ENST00000535174 LCE1CQ5T751 118 aa3.94□□□□□ -1.78
DDB1-205ENST00000535174 KRTAP4-12Q9BQ66 201 aa3.77□□□□□ -1.81
DDB1-205ENST00000535174 PRM1P04553 51 aa3.73□□□□□ -1.81
DDB1-205ENST00000535174 KRTAP5-11Q6L8G4 156 aa3.6□□□□□ -1.83
DDB1-205ENST00000535174 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
DDB1-205ENST00000535174 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.55□□□□□ -1.84
DDB1-205ENST00000535174 PHGR1C9JFL3 82 aa3.36□□□□□ -1.87
DDB1-205ENST00000535174 KRTAP21-2Q3LI59 83 aa3.31□□□□□ -1.88
DDB1-205ENST00000535174 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
DDB1-205ENST00000535174 MUC19Q7Z5P9 8384 aa2.96□□□□□ -1.94
DDB1-205ENST00000535174 KRTAP21-1Q3LI58 79 aa2.54□□□□□ -2
DDB1-205ENST00000535174 MUC16Q8WXI7 14507 aa2.07□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 22.1 ms