RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 K7ERS5 55 aa4.97□□□□□ -1.61
TMEM258-202ENST00000535042 TNP1P09430 55 aa4.97□□□□□ -1.61
TMEM258-202ENST00000535042 SPRR2EP22531 72 aa4.95□□□□□ -1.62
TMEM258-202ENST00000535042 SPRR2BP35325 72 aa4.95□□□□□ -1.62
TMEM258-202ENST00000535042 SPRR2AP35326 72 aa4.95□□□□□ -1.62
TMEM258-202ENST00000535042 KRTAP19-7Q3SYF9 63 aa4.94□□□□□ -1.62
TMEM258-202ENST00000535042 LCE1AQ5T7P2 110 aa4.94□□□□□ -1.62
TMEM258-202ENST00000535042 MDN1Q9NU22 5596 aa4.91□□□□□ -1.62
TMEM258-202ENST00000535042 LCE3AQ5TA76 89 aa4.9□□□□□ -1.63
TMEM258-202ENST00000535042 CDC42SE1Q9NRR8 79 aa4.9□□□□□ -1.63
TMEM258-202ENST00000535042 KRTAP19-5Q3LI72 72 aa4.88□□□□□ -1.63
TMEM258-202ENST00000535042 MT1EP04732 61 aa4.87□□□□□ -1.63
TMEM258-202ENST00000535042 A0A0A0MQY5 61 aa4.82□□□□□ -1.64
TMEM258-202ENST00000535042 KRTAP25-1Q3LHN0 102 aa4.82□□□□□ -1.64
TMEM258-202ENST00000535042 KRTAP20-1Q3LI63 56 aa4.78□□□□□ -1.64
TMEM258-202ENST00000535042 SPRR2DP22532 72 aa4.77□□□□□ -1.65
TMEM258-202ENST00000535042 KRTAP19-3Q7Z4W3 81 aa4.76□□□□□ -1.65
TMEM258-202ENST00000535042 KRTAP2-3P0C7H8 128 aa4.73□□□□□ -1.65
TMEM258-202ENST00000535042 ROMO1P60602 79 aa4.73□□□□□ -1.65
TMEM258-202ENST00000535042 KRTAP15-1Q3LI76 137 aa4.73□□□□□ -1.65
TMEM258-202ENST00000535042 KRTAP2-4Q9BYR9 128 aa4.73□□□□□ -1.65
TMEM258-202ENST00000535042 KRTAP12-3P60328 96 aa4.7□□□□□ -1.66
TMEM258-202ENST00000535042 MT1LQ93083 61 aa4.7□□□□□ -1.66
TMEM258-202ENST00000535042 MT1GP13640 62 aa4.67□□□□□ -1.66
TMEM258-202ENST00000535042 BRK1Q8WUW1 75 aa4.65□□□□□ -1.67
TMEM258-202ENST00000535042 MT1MQ8N339 61 aa4.61□□□□□ -1.67
TMEM258-202ENST00000535042 KRTAP2-2Q9BYT5 123 aa4.6□□□□□ -1.67
TMEM258-202ENST00000535042 KRTAP2-1Q9BYU5 128 aa4.6□□□□□ -1.67
TMEM258-202ENST00000535042 PP632Q6XCG6 107 aa4.59□□□□□ -1.67
TMEM258-202ENST00000535042 KRTAP4-3Q9BYR4 195 aa4.53□□□□□ -1.68
TMEM258-202ENST00000535042 DSTQ03001 7570 aaKnown RBP4.46□□□□□ -1.7
TMEM258-202ENST00000535042 GPR98Q8WXG9 6306 aa4.46□□□□□ -1.7
TMEM258-202ENST00000535042 PMAIP1Q13794 54 aa4.38□□□□□ -1.71
TMEM258-202ENST00000535042 LCE3CQ5T5A8 94 aa4.35□□□□□ -1.71
TMEM258-202ENST00000535042 PRO0628Q9UI54 55 aa4.29□□□□□ -1.72
TMEM258-202ENST00000535042 KRTAP5-4Q6L8H1 288 aa4.23□□□□□ -1.73
TMEM258-202ENST00000535042 KRTAP5-5Q701N2 237 aaPredicted RBP4.21□□□□□ -1.74
TMEM258-202ENST00000535042 PRAC1Q96KF2 57 aa4.21□□□□□ -1.74
TMEM258-202ENST00000535042 MT4P47944 62 aa4.17□□□□□ -1.74
TMEM258-202ENST00000535042 KRTAP9-6A8MVA2 160 aa4.15□□□□□ -1.75
TMEM258-202ENST00000535042 KTN1-AS1Q86SY8 53 aa4.03□□□□□ -1.76
TMEM258-202ENST00000535042 HMCN1Q96RW7 5635 aa4.03□□□□□ -1.77
TMEM258-202ENST00000535042 SYNE1Q8NF91 8797 aaKnown RBP4□□□□□ -1.77
TMEM258-202ENST00000535042 MT1AP04731 61 aa3.99□□□□□ -1.77
TMEM258-202ENST00000535042 KRTAP12-4P60329 112 aa3.98□□□□□ -1.77
TMEM258-202ENST00000535042 KRTAP20-2Q3LI61 65 aa3.98□□□□□ -1.77
TMEM258-202ENST00000535042 KRTAP6-1Q3LI64 71 aa3.97□□□□□ -1.77
TMEM258-202ENST00000535042 SPRR5A0A1B0GTR4 108 aa3.96□□□□□ -1.78
TMEM258-202ENST00000535042 AHNAK2Q8IVF2 5795 aa3.95□□□□□ -1.78
TMEM258-202ENST00000535042 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.91□□□□□ -1.78
TMEM258-202ENST00000535042 KRTAP5-11Q6L8G4 156 aa3.9□□□□□ -1.79
TMEM258-202ENST00000535042 NDUFAF8A1L188 74 aa3.79□□□□□ -1.8
TMEM258-202ENST00000535042 KRTAP5-2Q701N4 177 aa3.76□□□□□ -1.81
TMEM258-202ENST00000535042 LCE1EQ5T753 118 aa3.74□□□□□ -1.81
TMEM258-202ENST00000535042 KRTAP5-10Q6L8G5 202 aa3.74□□□□□ -1.81
TMEM258-202ENST00000535042 KRTAP6-2Q3LI66 62 aa3.73□□□□□ -1.81
TMEM258-202ENST00000535042 MT3P25713 68 aa3.62□□□□□ -1.83
TMEM258-202ENST00000535042 KRTAP5-7Q6L8G8 165 aa3.62□□□□□ -1.83
TMEM258-202ENST00000535042 KRTAP5-8O75690 187 aa3.44□□□□□ -1.86
TMEM258-202ENST00000535042 LUZP6Q538Z0 58 aa3.42□□□□□ -1.86
TMEM258-202ENST00000535042 KRTAP5-1Q6L8H4 278 aa3.41□□□□□ -1.86
TMEM258-202ENST00000535042 OBSCNQ5VST9 7968 aa3.41□□□□□ -1.86
TMEM258-202ENST00000535042 AHNAKQ09666 5890 aaKnown RBP3.4□□□□□ -1.86
TMEM258-202ENST00000535042 MUC5ACP98088 5654 aa3.29□□□□□ -1.88
TMEM258-202ENST00000535042 MUC5BQ9HC84 5762 aaPredicted RBP3.28□□□□□ -1.88
TMEM258-202ENST00000535042 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
TMEM258-202ENST00000535042 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
TMEM258-202ENST00000535042 LCE3DQ9BYE3 92 aa3.18□□□□□ -1.9
TMEM258-202ENST00000535042 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
TMEM258-202ENST00000535042 LCE3EQ5T5B0 92 aa3.04□□□□□ -1.92
TMEM258-202ENST00000535042 LCE1CQ5T751 118 aa3.03□□□□□ -1.92
TMEM258-202ENST00000535042 KRTAP21-2Q3LI59 83 aa2.62□□□□□ -1.99
TMEM258-202ENST00000535042 INE1O15225 51 aa2.46□□□□□ -2.02
TMEM258-202ENST00000535042 PRM1P04553 51 aa2.45□□□□□ -2.02
TMEM258-202ENST00000535042 PHGR1C9JFL3 82 aa2.34□□□□□ -2.03
TMEM258-202ENST00000535042 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
TMEM258-202ENST00000535042 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
TMEM258-202ENST00000535042 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 38.8 ms