RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-223ENST00000533979 C6orf48Q9UBA6 75 aa1.8□□□□□ -2.12
ATM-223ENST00000533979 SYNE2Q8WXH0 6885 aaKnown RBP1.79□□□□□ -2.12
ATM-223ENST00000533979 RPL39P62891 51 aaKnown RBP1.78□□□□□ -2.12
ATM-223ENST00000533979 CLPSL2Q6UWE3 100 aa1.78□□□□□ -2.12
ATM-223ENST00000533979 M0R2T5 61 aa1.77□□□□□ -2.13
ATM-223ENST00000533979 A0A096LNI7 61 aa1.76□□□□□ -2.13
ATM-223ENST00000533979 COX6A2Q02221 97 aa1.76□□□□□ -2.13
ATM-223ENST00000533979 GPR98Q8WXG9 6306 aa1.76□□□□□ -2.13
ATM-223ENST00000533979 H0YAA0 97 aa1.75□□□□□ -2.13
ATM-223ENST00000533979 KRTAP2-3P0C7H8 128 aa1.75□□□□□ -2.13
ATM-223ENST00000533979 WFDC13Q8IUB5 93 aa1.75□□□□□ -2.13
ATM-223ENST00000533979 KRTAP2-4Q9BYR9 128 aa1.75□□□□□ -2.13
ATM-223ENST00000533979 LPAP08519 4548 aa1.75□□□□□ -2.13
ATM-223ENST00000533979 MUC17Q685J3 4493 aa1.75□□□□□ -2.13
ATM-223ENST00000533979 MACF1Q9UPN3 7388 aaKnown RBP1.73□□□□□ -2.13
ATM-223ENST00000533979 IGLV5-48A0A075B6I7 105 aa1.73□□□□□ -2.13
ATM-223ENST00000533979 SPINK6Q6UWN8 80 aa1.72□□□□□ -2.13
ATM-223ENST00000533979 FCGBPQ9Y6R7 5405 aaPredicted RBP1.72□□□□□ -2.13
ATM-223ENST00000533979 C10orf95Q9H7T3 257 aa1.71□□□□□ -2.14
ATM-223ENST00000533979 H1FX-AS1Q4G0G2 97 aa1.69□□□□□ -2.14
ATM-223ENST00000533979 TOMM7Q9P0U1 55 aa1.67□□□□□ -2.14
ATM-223ENST00000533979 SPRR1AP35321 89 aa1.66□□□□□ -2.14
ATM-223ENST00000533979 MMP24-AS1A0A0U1RRL7 71 aa1.65□□□□□ -2.15
ATM-223ENST00000533979 KRTAP2-1Q9BYU5 128 aa1.65□□□□□ -2.15
ATM-223ENST00000533979 KMT2DO14686 5537 aa1.63□□□□□ -2.15
ATM-223ENST00000533979 MT1HP80294 61 aa1.63□□□□□ -2.15
ATM-223ENST00000533979 USH2AO75445 5202 aa1.63□□□□□ -2.15
ATM-223ENST00000533979 PRLHP81277 87 aa1.62□□□□□ -2.15
ATM-223ENST00000533979 DEFB105AQ8NG35 78 aa1.62□□□□□ -2.15
ATM-223ENST00000533979 KRTAP4-1Q9BYQ7 146 aa1.62□□□□□ -2.15
ATM-223ENST00000533979 SPRR1BP22528 89 aa1.61□□□□□ -2.15
ATM-223ENST00000533979 FLGP20930 4061 aaPredicted RBP1.6□□□□□ -2.15
ATM-223ENST00000533979 RPS29P62273 56 aaKnown RBP1.6□□□□□ -2.15
ATM-223ENST00000533979 SPINK1P00995 79 aa1.58□□□□□ -2.16
ATM-223ENST00000533979 MUC12Q9UKN1 5478 aa1.56□□□□□ -2.16
ATM-223ENST00000533979 KRTAP19-2Q3LHN2 52 aa1.56□□□□□ -2.16
ATM-223ENST00000533979 SPRR2EP22531 72 aa1.53□□□□□ -2.16
ATM-223ENST00000533979 SPRR2BP35325 72 aa1.53□□□□□ -2.16
ATM-223ENST00000533979 SPRR2AP35326 72 aa1.53□□□□□ -2.16
ATM-223ENST00000533979 KRTAP19-6Q3LI70 58 aa1.53□□□□□ -2.16
ATM-223ENST00000533979 S4R3F8 94 aa1.53□□□□□ -2.16
ATM-223ENST00000533979 AHNAK2Q8IVF2 5795 aa1.52□□□□□ -2.17
ATM-223ENST00000533979 MDN1Q9NU22 5596 aa1.5□□□□□ -2.17
ATM-223ENST00000533979 SPRR2DP22532 72 aa1.49□□□□□ -2.17
ATM-223ENST00000533979 C9orf92A6NGG3 77 aa1.48□□□□□ -2.17
ATM-223ENST00000533979 DSTQ03001 7570 aaKnown RBP1.47□□□□□ -2.17
ATM-223ENST00000533979 A0A0D9SG42 100 aa1.43□□□□□ -2.18
ATM-223ENST00000533979 KRTAP5-10Q6L8G5 202 aa1.43□□□□□ -2.18
ATM-223ENST00000533979 SPRR2FQ96RM1 72 aa1.43□□□□□ -2.18
ATM-223ENST00000533979 MT2AP02795 61 aa1.4□□□□□ -2.19
ATM-223ENST00000533979 AHNAKQ09666 5890 aaKnown RBP1.39□□□□□ -2.19
ATM-223ENST00000533979 MT1FP04733 61 aa1.38□□□□□ -2.19
ATM-223ENST00000533979 MT4P47944 62 aa1.35□□□□□ -2.19
ATM-223ENST00000533979 M0QZ58 72 aa1.34□□□□□ -2.19
ATM-223ENST00000533979 MUC5BQ9HC84 5762 aaPredicted RBP1.31□□□□□ -2.2
ATM-223ENST00000533979 KRTAP19-8Q3LI54 63 aa1.29□□□□□ -2.2
ATM-223ENST00000533979 KRTAP8-1Q8IUC2 63 aa1.29□□□□□ -2.2
ATM-223ENST00000533979 SPRR2GQ9BYE4 73 aa1.29□□□□□ -2.2
ATM-223ENST00000533979 MT1BP07438 61 aa1.28□□□□□ -2.2
ATM-223ENST00000533979 MUC5ACP98088 5654 aa1.26□□□□□ -2.21
ATM-223ENST00000533979 TNP1P09430 55 aa1.2□□□□□ -2.22
ATM-223ENST00000533979 MT1XP80297 61 aa1.2□□□□□ -2.22
ATM-223ENST00000533979 KRTAP19-7Q3SYF9 63 aa1.09□□□□□ -2.23
ATM-223ENST00000533979 MT1EP04732 61 aa1.06□□□□□ -2.24
ATM-223ENST00000533979 KRTAP20-2Q3LI61 65 aa1.06□□□□□ -2.24
ATM-223ENST00000533979 KRTAP19-3Q7Z4W3 81 aa1.06□□□□□ -2.24
ATM-223ENST00000533979 MT1GP13640 62 aa1.02□□□□□ -2.25
ATM-223ENST00000533979 KRTAP19-5Q3LI72 72 aa1.02□□□□□ -2.25
ATM-223ENST00000533979 PRM1P04553 51 aa1.01□□□□□ -2.25
ATM-223ENST00000533979 MT1LQ93083 61 aa1.01□□□□□ -2.25
ATM-223ENST00000533979 MT1MQ8N339 61 aa1□□□□□ -2.25
ATM-223ENST00000533979 SYNE1Q8NF91 8797 aaKnown RBP0.99□□□□□ -2.25
ATM-223ENST00000533979 PHGR1C9JFL3 82 aa0.94□□□□□ -2.26
ATM-223ENST00000533979 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
ATM-223ENST00000533979 MT1AP04731 61 aa0.86□□□□□ -2.27
ATM-223ENST00000533979 KRTAP6-1Q3LI64 71 aa0.85□□□□□ -2.27
ATM-223ENST00000533979 KRTAP6-2Q3LI66 62 aa0.8□□□□□ -2.28
ATM-223ENST00000533979 KRTAP21-1Q3LI58 79 aa0.76□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 394.8 ms