RNA–Protein interactions for RNA: ENST00000533915.5

CMTM1-218, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-218ENST00000533915 BRK1Q8WUW1 75 aa5.37□□□□□ -1.55
CMTM1-218ENST00000533915 KRTAP4-7Q9BYR0 210 aa5.36□□□□□ -1.55
CMTM1-218ENST00000533915 ROMO1P60602 79 aa5.34□□□□□ -1.55
CMTM1-218ENST00000533915 LCE3AQ5TA76 89 aa5.29□□□□□ -1.56
CMTM1-218ENST00000533915 LCE4AQ5TA78 99 aa5.29□□□□□ -1.56
CMTM1-218ENST00000533915 SPRR2EP22531 72 aa5.26□□□□□ -1.57
CMTM1-218ENST00000533915 SPRR2BP35325 72 aa5.26□□□□□ -1.57
CMTM1-218ENST00000533915 SPRR2AP35326 72 aa5.26□□□□□ -1.57
CMTM1-218ENST00000533915 KRTAP4-9Q9BYQ8 210 aa5.25□□□□□ -1.57
CMTM1-218ENST00000533915 KRTAP19-5Q3LI72 72 aa5.23□□□□□ -1.57
CMTM1-218ENST00000533915 KRTAP19-7Q3SYF9 63 aa5.23□□□□□ -1.57
CMTM1-218ENST00000533915 LCE1AQ5T7P2 110 aa5.2□□□□□ -1.58
CMTM1-218ENST00000533915 MT1EP04732 61 aa5.19□□□□□ -1.58
CMTM1-218ENST00000533915 PP632Q6XCG6 107 aa5.16□□□□□ -1.58
CMTM1-218ENST00000533915 KRTAP15-1Q3LI76 137 aa5.15□□□□□ -1.59
CMTM1-218ENST00000533915 KRTAP2-3P0C7H8 128 aa5.14□□□□□ -1.59
CMTM1-218ENST00000533915 KRTAP2-4Q9BYR9 128 aa5.14□□□□□ -1.59
CMTM1-218ENST00000533915 KRTAP12-3P60328 96 aa5.13□□□□□ -1.59
CMTM1-218ENST00000533915 KRTAP4-2Q9BYR5 136 aa5.11□□□□□ -1.59
CMTM1-218ENST00000533915 KRTAP19-3Q7Z4W3 81 aa5.1□□□□□ -1.59
CMTM1-218ENST00000533915 SPRR2DP22532 72 aa5.09□□□□□ -1.59
CMTM1-218ENST00000533915 PMAIP1Q13794 54 aa5.09□□□□□ -1.59
CMTM1-218ENST00000533915 KRTAP4-11Q9BYQ6 195 aa5.07□□□□□ -1.6
CMTM1-218ENST00000533915 LCE5AQ5TCM9 118 aa5.05□□□□□ -1.6
CMTM1-218ENST00000533915 MT1GP13640 62 aa5.04□□□□□ -1.6
CMTM1-218ENST00000533915 PRO0628Q9UI54 55 aa5.03□□□□□ -1.6
CMTM1-218ENST00000533915 MT1LQ93083 61 aa5.02□□□□□ -1.61
CMTM1-218ENST00000533915 KRTAP2-2Q9BYT5 123 aa4.97□□□□□ -1.61
CMTM1-218ENST00000533915 KRTAP2-1Q9BYU5 128 aa4.97□□□□□ -1.61
CMTM1-218ENST00000533915 PRAC1Q96KF2 57 aa4.93□□□□□ -1.62
CMTM1-218ENST00000533915 MT1MQ8N339 61 aa4.92□□□□□ -1.62
CMTM1-218ENST00000533915 DSTQ03001 7570 aaKnown RBP4.78□□□□□ -1.64
CMTM1-218ENST00000533915 LCE3CQ5T5A8 94 aa4.76□□□□□ -1.65
CMTM1-218ENST00000533915 GPR98Q8WXG9 6306 aa4.75□□□□□ -1.65
CMTM1-218ENST00000533915 KRTAP4-3Q9BYR4 195 aa4.73□□□□□ -1.65
CMTM1-218ENST00000533915 KTN1-AS1Q86SY8 53 aa4.72□□□□□ -1.65
CMTM1-218ENST00000533915 KRTAP5-3Q6L8H2 238 aa4.5□□□□□ -1.69
CMTM1-218ENST00000533915 KRTAP5-4Q6L8H1 288 aa4.46□□□□□ -1.7
CMTM1-218ENST00000533915 KRTAP5-5Q701N2 237 aaPredicted RBP4.45□□□□□ -1.7
CMTM1-218ENST00000533915 MT4P47944 62 aa4.4□□□□□ -1.71
CMTM1-218ENST00000533915 HMCN1Q96RW7 5635 aa4.39□□□□□ -1.71
CMTM1-218ENST00000533915 KRTAP9-6A8MVA2 160 aa4.38□□□□□ -1.71
CMTM1-218ENST00000533915 NDUFAF8A1L188 74 aa4.37□□□□□ -1.71
CMTM1-218ENST00000533915 KRTAP12-4P60329 112 aa4.35□□□□□ -1.71
CMTM1-218ENST00000533915 AHNAK2Q8IVF2 5795 aa4.34□□□□□ -1.71
CMTM1-218ENST00000533915 MT1AP04731 61 aa4.3□□□□□ -1.72
CMTM1-218ENST00000533915 SPRR5A0A1B0GTR4 108 aa4.28□□□□□ -1.72
CMTM1-218ENST00000533915 KRTAP6-1Q3LI64 71 aa4.21□□□□□ -1.74
CMTM1-218ENST00000533915 KRTAP20-2Q3LI61 65 aa4.2□□□□□ -1.74
CMTM1-218ENST00000533915 SYNE1Q8NF91 8797 aaKnown RBP4.18□□□□□ -1.74
CMTM1-218ENST00000533915 KRTAP5-10Q6L8G5 202 aa4.16□□□□□ -1.74
CMTM1-218ENST00000533915 LUZP6Q538Z0 58 aa4.08□□□□□ -1.76
CMTM1-218ENST00000533915 KRTAP5-7Q6L8G8 165 aa4.06□□□□□ -1.76
CMTM1-218ENST00000533915 MT3P25713 68 aa4.04□□□□□ -1.76
CMTM1-218ENST00000533915 KRTAP6-2Q3LI66 62 aa3.97□□□□□ -1.77
CMTM1-218ENST00000533915 KRTAP5-2Q701N4 177 aa3.97□□□□□ -1.77
CMTM1-218ENST00000533915 LCE1FQ5T754 118 aa3.87□□□□□ -1.79
CMTM1-218ENST00000533915 AHNAKQ09666 5890 aaKnown RBP3.68□□□□□ -1.82
CMTM1-218ENST00000533915 MUC5BQ9HC84 5762 aaPredicted RBP3.65□□□□□ -1.83
CMTM1-218ENST00000533915 OBSCNQ5VST9 7968 aa3.62□□□□□ -1.83
CMTM1-218ENST00000533915 MUC5ACP98088 5654 aa3.59□□□□□ -1.83
CMTM1-218ENST00000533915 KRTAP5-8O75690 187 aa3.58□□□□□ -1.84
CMTM1-218ENST00000533915 LCE1EQ5T753 118 aa3.54□□□□□ -1.84
CMTM1-218ENST00000533915 LCE3DQ9BYE3 92 aa3.53□□□□□ -1.84
CMTM1-218ENST00000533915 KRTAP5-1Q6L8H4 278 aa3.48□□□□□ -1.85
CMTM1-218ENST00000533915 KRTAP5-11Q6L8G4 156 aa3.4□□□□□ -1.87
CMTM1-218ENST00000533915 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.39□□□□□ -1.87
CMTM1-218ENST00000533915 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
CMTM1-218ENST00000533915 LCE1BQ5T7P3 118 aa3.28□□□□□ -1.88
CMTM1-218ENST00000533915 LCE1CQ5T751 118 aa3.27□□□□□ -1.89
CMTM1-218ENST00000533915 INE1O15225 51 aa3□□□□□ -1.93
CMTM1-218ENST00000533915 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
CMTM1-218ENST00000533915 KRTAP21-2Q3LI59 83 aa2.76□□□□□ -1.97
CMTM1-218ENST00000533915 PRM1P04553 51 aa2.72□□□□□ -1.97
CMTM1-218ENST00000533915 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
CMTM1-218ENST00000533915 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
CMTM1-218ENST00000533915 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
CMTM1-218ENST00000533915 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 38.7 ms